RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	PPP1R15A	O75807	674 aa	Predicted RBP	19.18	■□□□□ 0.66
KCNMA1-238	ENST00000638514	PRX	Q9BXM0	1461 aa		19.17	■□□□□ 0.66
KCNMA1-238	ENST00000638514	WDR97	A6NE52	1622 aa		19.16	■□□□□ 0.66
KCNMA1-238	ENST00000638514	ANO8	Q9HCE9	1232 aa	Predicted RBP	19.15	■□□□□ 0.66
KCNMA1-238	ENST00000638514	FANCI	Q9NVI1	1328 aa		19.15	■□□□□ 0.66
KCNMA1-238	ENST00000638514	ANP32C	O43423	234 aa		19.15	■□□□□ 0.66
KCNMA1-238	ENST00000638514	TOP2B	Q02880	1626 aa		19.15	■□□□□ 0.66
KCNMA1-238	ENST00000638514	SETD5	Q9C0A6	1442 aa		19.1	■□□□□ 0.65
KCNMA1-238	ENST00000638514	SIN3A	Q96ST3	1273 aa		19.09	■□□□□ 0.65
KCNMA1-238	ENST00000638514	CDK11A	Q9UQ88	783 aa	Predicted RBP	19.09	■□□□□ 0.65
KCNMA1-238	ENST00000638514	TIMELESS	Q9UNS1	1208 aa		19.06	■□□□□ 0.64
KCNMA1-238	ENST00000638514	BIVM-ERCC5	R4GMW8	1640 aa		19.05	■□□□□ 0.64
KCNMA1-238	ENST00000638514	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.04	■□□□□ 0.64
KCNMA1-238	ENST00000638514	MYT1L	Q9UL68	1186 aa		19.03	■□□□□ 0.64
KCNMA1-238	ENST00000638514	DEK	P35659	375 aa	Known RBP	19.03	■□□□□ 0.64
KCNMA1-238	ENST00000638514	ARHGAP35	Q9NRY4	1499 aa		19.02	■□□□□ 0.64
KCNMA1-238	ENST00000638514	POLR3GL	Q9BT43	218 aa		19	■□□□□ 0.63
KCNMA1-238	ENST00000638514	ATAD2B	Q9ULI0	1458 aa		18.99	■□□□□ 0.63
KCNMA1-238	ENST00000638514	KIF27	Q86VH2	1401 aa		18.95	■□□□□ 0.62
KCNMA1-238	ENST00000638514	IRX6	P78412	446 aa	Predicted RBP	18.95	■□□□□ 0.62
KCNMA1-238	ENST00000638514	TIAM1	Q13009	1591 aa		18.94	■□□□□ 0.62
KCNMA1-238	ENST00000638514	FBLN2	P98095	1184 aa		18.94	■□□□□ 0.62
KCNMA1-238	ENST00000638514	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
KCNMA1-238	ENST00000638514	MAP3K1	Q13233	1512 aa		18.93	■□□□□ 0.62
KCNMA1-238	ENST00000638514	BICRA	Q9NZM4	1560 aa		18.93	■□□□□ 0.62
KCNMA1-238	ENST00000638514	SALL2	Q9Y467	1007 aa	Predicted RBP	18.92	■□□□□ 0.62
KCNMA1-238	ENST00000638514	ERICH6B	Q5W0A0	696 aa		18.91	■□□□□ 0.62
KCNMA1-238	ENST00000638514	PHLDB1	Q86UU1	1377 aa		18.89	■□□□□ 0.61
KCNMA1-238	ENST00000638514	LRRC9	Q6ZRR7	1453 aa		18.88	■□□□□ 0.61
KCNMA1-238	ENST00000638514	PPP4R2	Q9NY27	417 aa		18.87	■□□□□ 0.61
KCNMA1-238	ENST00000638514	TONSL	Q96HA7	1378 aa		18.85	■□□□□ 0.61
KCNMA1-238	ENST00000638514	CCDC136	Q96JN2	1154 aa		18.84	■□□□□ 0.61
KCNMA1-238	ENST00000638514	CHIC2	Q9UKJ5	165 aa		18.83	■□□□□ 0.6
KCNMA1-238	ENST00000638514	CUX1	P39880	1505 aa		18.83	■□□□□ 0.6
KCNMA1-238	ENST00000638514	NBR1	Q14596	966 aa		18.76	■□□□□ 0.59
KCNMA1-238	ENST00000638514	NOP58	Q9Y2X3	529 aa	Known RBP	18.75	■□□□□ 0.59
KCNMA1-238	ENST00000638514	ZNF326	Q5BKZ1	582 aa	Known RBP	18.75	■□□□□ 0.59
KCNMA1-238	ENST00000638514	FHAD1	B1AJZ9	1412 aa		18.73	■□□□□ 0.59
KCNMA1-238	ENST00000638514	CFAP43	Q8NDM7	1665 aa		18.73	■□□□□ 0.59
KCNMA1-238	ENST00000638514	B4GALNT3	Q6L9W6	998 aa		18.72	■□□□□ 0.59
KCNMA1-238	ENST00000638514	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
KCNMA1-238	ENST00000638514	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.67	■□□□□ 0.58
KCNMA1-238	ENST00000638514	SENP3-EIF4A1	A0A087X0R7	540 aa		18.67	■□□□□ 0.58
KCNMA1-238	ENST00000638514	CCDC18	Q5T9S5	1454 aa		18.67	■□□□□ 0.58
KCNMA1-238	ENST00000638514	IGF1R	P08069	1367 aa		18.67	■□□□□ 0.58
KCNMA1-238	ENST00000638514	IL27	Q8NEV9	243 aa		18.66	■□□□□ 0.58
KCNMA1-238	ENST00000638514	PCF11	O94913	1555 aa	Known RBP	18.66	■□□□□ 0.58
KCNMA1-238	ENST00000638514	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.65	■□□□□ 0.58
KCNMA1-238	ENST00000638514	RTN4	Q9NQC3	1192 aa	Known RBP	18.65	■□□□□ 0.58
KCNMA1-238	ENST00000638514	UACA	Q9BZF9	1416 aa		18.65	■□□□□ 0.58
KCNMA1-238	ENST00000638514	WASHC2A	Q641Q2	1341 aa		18.65	■□□□□ 0.58
KCNMA1-238	ENST00000638514	PAK3	O75914	559 aa	Predicted RBP	18.64	■□□□□ 0.57
KCNMA1-238	ENST00000638514	CARMIL1	Q5VZK9	1371 aa		18.62	■□□□□ 0.57
KCNMA1-238	ENST00000638514	RRP7BP	Q9NSQ0	103 aa		18.62	■□□□□ 0.57
KCNMA1-238	ENST00000638514	HSPA5	P11021	654 aa	Known RBP	18.62	■□□□□ 0.57
KCNMA1-238	ENST00000638514	ZBED9	Q6R2W3	1325 aa		18.61	■□□□□ 0.57
KCNMA1-238	ENST00000638514	CCDC184	Q52MB2	194 aa		18.61	■□□□□ 0.57
KCNMA1-238	ENST00000638514	UBE2Q2	Q8WVN8	375 aa		18.6	■□□□□ 0.57
KCNMA1-238	ENST00000638514	FAM9B	Q8IZU0	186 aa		18.6	■□□□□ 0.57
KCNMA1-238	ENST00000638514	CNTLN	Q9NXG0	1405 aa		18.59	■□□□□ 0.57
KCNMA1-238	ENST00000638514	HFM1	A2PYH4	1435 aa		18.59	■□□□□ 0.57
KCNMA1-238	ENST00000638514	KDM5B	Q9UGL1	1544 aa		18.59	■□□□□ 0.57
KCNMA1-238	ENST00000638514	RTL5	Q5HYW3	569 aa	Predicted RBP	18.59	■□□□□ 0.57
KCNMA1-238	ENST00000638514	FGD6	Q6ZV73	1430 aa		18.58	■□□□□ 0.56
KCNMA1-238	ENST00000638514	NCOA2	Q15596	1464 aa		18.57	■□□□□ 0.56
KCNMA1-238	ENST00000638514	ANP32A	P39687	249 aa	Known RBP	18.57	■□□□□ 0.56
KCNMA1-238	ENST00000638514	MRS2	Q9HD23	443 aa		18.56	■□□□□ 0.56
KCNMA1-238	ENST00000638514	PTPN23	Q9H3S7	1636 aa		18.56	■□□□□ 0.56
KCNMA1-238	ENST00000638514	FYCO1	Q9BQS8	1478 aa		18.56	■□□□□ 0.56
KCNMA1-238	ENST00000638514	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.56	■□□□□ 0.56
KCNMA1-238	ENST00000638514	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.55	■□□□□ 0.56
KCNMA1-238	ENST00000638514	IPO9	Q96P70	1041 aa	Known RBP	18.54	■□□□□ 0.56
KCNMA1-238	ENST00000638514	CFTR	P13569	1480 aa		18.54	■□□□□ 0.56
KCNMA1-238	ENST00000638514	FHOD3	Q2V2M9	1422 aa		18.52	■□□□□ 0.56
KCNMA1-238	ENST00000638514	PTPRK	Q15262	1439 aa		18.52	■□□□□ 0.56
KCNMA1-238	ENST00000638514	CASKIN1	Q8WXD9	1431 aa		18.52	■□□□□ 0.56
KCNMA1-238	ENST00000638514	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.51	■□□□□ 0.55
KCNMA1-238	ENST00000638514	HMGXB3	Q12766	1538 aa		18.51	■□□□□ 0.55
KCNMA1-238	ENST00000638514	FGD5	Q6ZNL6	1462 aa		18.5	■□□□□ 0.55
KCNMA1-238	ENST00000638514	NAIP	Q13075	1403 aa		18.5	■□□□□ 0.55
KCNMA1-238	ENST00000638514	TDRD9	Q8NDG6	1382 aa	Known RBP	18.5	■□□□□ 0.55
KCNMA1-238	ENST00000638514	DNAJC5B	Q9UF47	199 aa		18.5	■□□□□ 0.55
KCNMA1-238	ENST00000638514	AQR	O60306	1485 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
KCNMA1-238	ENST00000638514	FMN1	Q68DA7	1419 aa		18.48	■□□□□ 0.55
KCNMA1-238	ENST00000638514	MTUS2	Q5JR59	1369 aa		18.48	■□□□□ 0.55
KCNMA1-238	ENST00000638514	NCAPD3	P42695	1498 aa		18.47	■□□□□ 0.55
KCNMA1-238	ENST00000638514	CCDC7	Q96M83	1385 aa		18.47	■□□□□ 0.55
KCNMA1-238	ENST00000638514	NCOA1	Q15788	1441 aa		18.45	■□□□□ 0.54
KCNMA1-238	ENST00000638514	EFCAB5	A4FU69	1503 aa		18.45	■□□□□ 0.54
KCNMA1-238	ENST00000638514	SMG6	Q86US8	1419 aa	Known RBP	18.45	■□□□□ 0.54
KCNMA1-238	ENST00000638514	C11orf95	C9JLR9	678 aa	Predicted RBP	18.43	■□□□□ 0.54
KCNMA1-238	ENST00000638514	AKNA	Q7Z591	1439 aa		18.43	■□□□□ 0.54
KCNMA1-238	ENST00000638514	FOXD1	Q16676	465 aa		18.42	■□□□□ 0.54
KCNMA1-238	ENST00000638514	NUDC	Q9Y266	331 aa		18.4	■□□□□ 0.54
KCNMA1-238	ENST00000638514	RNF123	Q5XPI4	1314 aa		18.39	■□□□□ 0.53
KCNMA1-238	ENST00000638514	MYOM3	Q5VTT5	1437 aa		18.38	■□□□□ 0.53
KCNMA1-238	ENST00000638514	PRDM2	Q13029	1718 aa		18.37	■□□□□ 0.53
KCNMA1-238	ENST00000638514	L3MBTL2	Q969R5	705 aa		18.36	■□□□□ 0.53
KCNMA1-238	ENST00000638514	HECW1	Q76N89	1606 aa		18.35	■□□□□ 0.53
KCNMA1-238	ENST00000638514	DENND4B	O75064	1496 aa	Predicted RBP	18.33	■□□□□ 0.52

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