RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
KCNMA1-238ENST00000638514 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
KCNMA1-238ENST00000638514 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
KCNMA1-238ENST00000638514 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
KCNMA1-238ENST00000638514 HRCP23327 699 aa22.97■■□□□ 1.27
KCNMA1-238ENST00000638514 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
KCNMA1-238ENST00000638514 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
KCNMA1-238ENST00000638514 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
KCNMA1-238ENST00000638514 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
KCNMA1-238ENST00000638514 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
KCNMA1-238ENST00000638514 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
KCNMA1-238ENST00000638514 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
KCNMA1-238ENST00000638514 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
KCNMA1-238ENST00000638514 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
KCNMA1-238ENST00000638514 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
KCNMA1-238ENST00000638514 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
KCNMA1-238ENST00000638514 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
KCNMA1-238ENST00000638514 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
KCNMA1-238ENST00000638514 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
KCNMA1-238ENST00000638514 MYT1Q01538 1121 aa21.6■■□□□ 1.05
KCNMA1-238ENST00000638514 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
KCNMA1-238ENST00000638514 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
KCNMA1-238ENST00000638514 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
KCNMA1-238ENST00000638514 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
KCNMA1-238ENST00000638514 ABCC9O60706 1549 aa21.02■□□□□ 0.96
KCNMA1-238ENST00000638514 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
KCNMA1-238ENST00000638514 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
KCNMA1-238ENST00000638514 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
KCNMA1-238ENST00000638514 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.93
KCNMA1-238ENST00000638514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
KCNMA1-238ENST00000638514 DIEXFQ68CQ4 756 aaKnown RBP20.87■□□□□ 0.93
KCNMA1-238ENST00000638514 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
KCNMA1-238ENST00000638514 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
KCNMA1-238ENST00000638514 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
KCNMA1-238ENST00000638514 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
KCNMA1-238ENST00000638514 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
KCNMA1-238ENST00000638514 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
KCNMA1-238ENST00000638514 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
KCNMA1-238ENST00000638514 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
KCNMA1-238ENST00000638514 BCL11AQ9H165 835 aa20.39■□□□□ 0.86
KCNMA1-238ENST00000638514 MIER1Q8N108 512 aa20.31■□□□□ 0.84
KCNMA1-238ENST00000638514 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
KCNMA1-238ENST00000638514 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
KCNMA1-238ENST00000638514 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
KCNMA1-238ENST00000638514 WIZO95785 1651 aa20.21■□□□□ 0.83
KCNMA1-238ENST00000638514 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
KCNMA1-238ENST00000638514 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
KCNMA1-238ENST00000638514 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
KCNMA1-238ENST00000638514 APLP2Q06481 763 aa20.12■□□□□ 0.81
KCNMA1-238ENST00000638514 CLSPNQ9HAW4 1339 aa20.1■□□□□ 0.81
KCNMA1-238ENST00000638514 ANP32EQ9BTT0 268 aa20.1■□□□□ 0.81
KCNMA1-238ENST00000638514 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
KCNMA1-238ENST00000638514 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
KCNMA1-238ENST00000638514 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
KCNMA1-238ENST00000638514 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
KCNMA1-238ENST00000638514 SOGA1O94964 1423 aa20.01■□□□□ 0.79
KCNMA1-238ENST00000638514 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
KCNMA1-238ENST00000638514 EEA1Q15075 1411 aa20■□□□□ 0.79
KCNMA1-238ENST00000638514 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
KCNMA1-238ENST00000638514 NACADO15069 1562 aa19.94■□□□□ 0.78
KCNMA1-238ENST00000638514 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
KCNMA1-238ENST00000638514 ITGAEP38570 1179 aa19.92■□□□□ 0.78
KCNMA1-238ENST00000638514 TSHZ2Q9NRE2 1034 aa19.9■□□□□ 0.78
KCNMA1-238ENST00000638514 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
KCNMA1-238ENST00000638514 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
KCNMA1-238ENST00000638514 PRKCSHP14314 528 aaPredicted RBP19.86■□□□□ 0.77
KCNMA1-238ENST00000638514 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
KCNMA1-238ENST00000638514 CLIP1P30622 1438 aa19.75■□□□□ 0.75
KCNMA1-238ENST00000638514 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
KCNMA1-238ENST00000638514 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
KCNMA1-238ENST00000638514 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
KCNMA1-238ENST00000638514 KIF21BO75037 1637 aa19.67■□□□□ 0.74
KCNMA1-238ENST00000638514 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
KCNMA1-238ENST00000638514 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
KCNMA1-238ENST00000638514 BCANQ96GW7 911 aa19.55■□□□□ 0.72
KCNMA1-238ENST00000638514 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
KCNMA1-238ENST00000638514 FKBP8Q14318 412 aa19.5■□□□□ 0.71
KCNMA1-238ENST00000638514 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
KCNMA1-238ENST00000638514 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
KCNMA1-238ENST00000638514 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
KCNMA1-238ENST00000638514 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-238ENST00000638514 NEFLP07196 543 aa19.41■□□□□ 0.7
KCNMA1-238ENST00000638514 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-238ENST00000638514 CUX2O14529 1486 aa19.36■□□□□ 0.69
KCNMA1-238ENST00000638514 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
KCNMA1-238ENST00000638514 ARID3CA6NKF2 412 aa19.33■□□□□ 0.69
KCNMA1-238ENST00000638514 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
KCNMA1-238ENST00000638514 MSH5O43196 834 aa19.3■□□□□ 0.68
KCNMA1-238ENST00000638514 FAM50AQ14320 339 aaKnown RBP19.29■□□□□ 0.68
KCNMA1-238ENST00000638514 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
KCNMA1-238ENST00000638514 CNGB1Q14028 1251 aaPredicted RBP19.28■□□□□ 0.68
KCNMA1-238ENST00000638514 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
KCNMA1-238ENST00000638514 ERICH6Q7L0X2 663 aa19.25■□□□□ 0.67
KCNMA1-238ENST00000638514 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
KCNMA1-238ENST00000638514 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
KCNMA1-238ENST00000638514 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
KCNMA1-238ENST00000638514 CCER2I3L3R5 266 aa19.2■□□□□ 0.66
KCNMA1-238ENST00000638514 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
KCNMA1-238ENST00000638514 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
KCNMA1-238ENST00000638514 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms