RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
CTSD-213ENST00000637915 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
CTSD-213ENST00000637915 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
CTSD-213ENST00000637915 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
CTSD-213ENST00000637915 WDR62O43379 1518 aa25.07■■□□□ 1.6
CTSD-213ENST00000637915 PCF11O94913 1555 aaKnown RBP25.04■■□□□ 1.6
CTSD-213ENST00000637915 FHOD3Q2V2M9 1422 aa25.03■■□□□ 1.6
CTSD-213ENST00000637915 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
CTSD-213ENST00000637915 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
CTSD-213ENST00000637915 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.591e-6■■■■■ 31.1
CTSD-213ENST00000637915 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
CTSD-213ENST00000637915 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
CTSD-213ENST00000637915 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
CTSD-213ENST00000637915 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
CTSD-213ENST00000637915 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
CTSD-213ENST00000637915 LRRC9Q6ZRR7 1453 aa24.95■■□□□ 1.58
CTSD-213ENST00000637915 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
CTSD-213ENST00000637915 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
CTSD-213ENST00000637915 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
CTSD-213ENST00000637915 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
CTSD-213ENST00000637915 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
CTSD-213ENST00000637915 FMN1Q68DA7 1419 aa24.9■■□□□ 1.58
CTSD-213ENST00000637915 CCNB3Q8WWL7 1395 aa24.88■■□□□ 1.57
CTSD-213ENST00000637915 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
CTSD-213ENST00000637915 EIF4G3O43432 1585 aaKnown RBP24.82■■□□□ 1.56
CTSD-213ENST00000637915 ATP1B4Q9UN42 357 aaPredicted RBP24.81■■□□□ 1.56
CTSD-213ENST00000637915 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
CTSD-213ENST00000637915 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
CTSD-213ENST00000637915 LRRIQ1Q96JM4 1722 aa24.76■■□□□ 1.55
CTSD-213ENST00000637915 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
CTSD-213ENST00000637915 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
CTSD-213ENST00000637915 DHX57Q6P158 1386 aaKnown RBP24.66■■□□□ 1.54
CTSD-213ENST00000637915 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.54
CTSD-213ENST00000637915 ITGAEP38570 1179 aa24.63■■□□□ 1.53
CTSD-213ENST00000637915 KIAA0586Q9BVV6 1533 aa24.63■■□□□ 1.53
CTSD-213ENST00000637915 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
CTSD-213ENST00000637915 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
CTSD-213ENST00000637915 HECW1Q76N89 1606 aa24.6■■□□□ 1.53
CTSD-213ENST00000637915 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
CTSD-213ENST00000637915 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
CTSD-213ENST00000637915 EHBP1L1Q8N3D4 1523 aa24.57■■□□□ 1.52
CTSD-213ENST00000637915 FAM50AQ14320 339 aaKnown RBP24.56■■□□□ 1.52
CTSD-213ENST00000637915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.56■■□□□ 1.523e-7■■■□□ 14.6
CTSD-213ENST00000637915 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
CTSD-213ENST00000637915 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
CTSD-213ENST00000637915 SUPT6HQ7KZ85 1726 aaKnown RBP24.54■■□□□ 1.52
CTSD-213ENST00000637915 FGD6Q6ZV73 1430 aa24.54■■□□□ 1.52
CTSD-213ENST00000637915 RAB3GAP2Q9H2M9 1393 aa24.53■■□□□ 1.52
CTSD-213ENST00000637915 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
CTSD-213ENST00000637915 MAGI3Q5TCQ9 1506 aa24.52■■□□□ 1.52
CTSD-213ENST00000637915 NCOA2Q15596 1464 aa24.52■■□□□ 1.52
CTSD-213ENST00000637915 EPRSP07814 1512 aaKnown RBP24.5■■□□□ 1.51
CTSD-213ENST00000637915 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
CTSD-213ENST00000637915 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
CTSD-213ENST00000637915 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
CTSD-213ENST00000637915 MYOM3Q5VTT5 1437 aa24.46■■□□□ 1.51
CTSD-213ENST00000637915 CDK13Q14004 1512 aaKnown RBP24.44■■□□□ 1.5
CTSD-213ENST00000637915 NUP160Q12769 1436 aa24.43■■□□□ 1.5
CTSD-213ENST00000637915 ZNF316A6NFI3 1004 aaPredicted RBP24.41■■□□□ 1.5
CTSD-213ENST00000637915 FBLN2P98095 1184 aa24.39■■□□□ 1.49
CTSD-213ENST00000637915 RAPGEF6Q8TEU7 1601 aa24.38■■□□□ 1.49
CTSD-213ENST00000637915 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
CTSD-213ENST00000637915 PTPN23Q9H3S7 1636 aa24.36■■□□□ 1.49
CTSD-213ENST00000637915 NUP153P49790 1475 aaKnown RBP24.36■■□□□ 1.49
CTSD-213ENST00000637915 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
CTSD-213ENST00000637915 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
CTSD-213ENST00000637915 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
CTSD-213ENST00000637915 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
CTSD-213ENST00000637915 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
CTSD-213ENST00000637915 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
CTSD-213ENST00000637915 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
CTSD-213ENST00000637915 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
CTSD-213ENST00000637915 PLB1Q6P1J6 1458 aa24.24■■□□□ 1.47
CTSD-213ENST00000637915 NAIPQ13075 1403 aa24.2■■□□□ 1.46
CTSD-213ENST00000637915 CHD1O14646 1710 aa24.18■■□□□ 1.46
CTSD-213ENST00000637915 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
CTSD-213ENST00000637915 ABCA8O94911 1581 aa24.14■■□□□ 1.46
CTSD-213ENST00000637915 TROQ12816 1431 aaPredicted RBP24.14■■□□□ 1.45
CTSD-213ENST00000637915 GCC2Q8IWJ2 1684 aa24.14■■□□□ 1.45
CTSD-213ENST00000637915 PRG4Q92954 1404 aaPredicted RBP24.12■■□□□ 1.45
CTSD-213ENST00000637915 UACAQ9BZF9 1416 aa24.12■■□□□ 1.45
CTSD-213ENST00000637915 ADCY10Q96PN6 1610 aa24.11■■□□□ 1.45
CTSD-213ENST00000637915 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
CTSD-213ENST00000637915 SIN3AQ96ST3 1273 aa24.07■■□□□ 1.44
CTSD-213ENST00000637915 KIF14Q15058 1648 aa24.06■■□□□ 1.44
CTSD-213ENST00000637915 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
CTSD-213ENST00000637915 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
CTSD-213ENST00000637915 CHIC2Q9UKJ5 165 aa24.05■■□□□ 1.44
CTSD-213ENST00000637915 DAPK1P53355 1430 aa24.03■■□□□ 1.44
CTSD-213ENST00000637915 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
CTSD-213ENST00000637915 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
CTSD-213ENST00000637915 NEUROD1Q13562 356 aa24.02■■□□□ 1.43
CTSD-213ENST00000637915 ATP10BO94823 1461 aa24.01■■□□□ 1.43
CTSD-213ENST00000637915 KDM6BO15054 1643 aa24■■□□□ 1.43
CTSD-213ENST00000637915 TIMELESSQ9UNS1 1208 aa24■■□□□ 1.43
CTSD-213ENST00000637915 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
CTSD-213ENST00000637915 ABCC5O15440 1437 aa23.99■■□□□ 1.43
CTSD-213ENST00000637915 ZNF644Q9H582 1327 aaPredicted RBP23.99■■□□□ 1.43
CTSD-213ENST00000637915 PTPRGP23470 1445 aa23.99■■□□□ 1.43
CTSD-213ENST00000637915 ROCK1Q13464 1354 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms