RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
GPC3-204ENST00000631057 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
GPC3-204ENST00000631057 MAP3K1Q13233 1512 aa12□□□□□ -0.49
GPC3-204ENST00000631057 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
GPC3-204ENST00000631057 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
GPC3-204ENST00000631057 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
GPC3-204ENST00000631057 CUL7Q14999 1698 aa11.97□□□□□ -0.49
GPC3-204ENST00000631057 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
GPC3-204ENST00000631057 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
GPC3-204ENST00000631057 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
GPC3-204ENST00000631057 NESP48681 1621 aa11.95□□□□□ -0.5
GPC3-204ENST00000631057 CFAP43Q8NDM7 1665 aa11.95□□□□□ -0.5
GPC3-204ENST00000631057 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
GPC3-204ENST00000631057 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
GPC3-204ENST00000631057 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
GPC3-204ENST00000631057 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
GPC3-204ENST00000631057 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
GPC3-204ENST00000631057 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
GPC3-204ENST00000631057 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
GPC3-204ENST00000631057 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
GPC3-204ENST00000631057 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
GPC3-204ENST00000631057 ZBTB22O15209 634 aa11.91□□□□□ -0.5
GPC3-204ENST00000631057 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.5
GPC3-204ENST00000631057 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.51
GPC3-204ENST00000631057 PCF11O94913 1555 aaKnown RBP11.89□□□□□ -0.51
GPC3-204ENST00000631057 LRRC9Q6ZRR7 1453 aa11.88□□□□□ -0.51
GPC3-204ENST00000631057 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
GPC3-204ENST00000631057 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.512e-10■■■■□ 21.7
GPC3-204ENST00000631057 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
GPC3-204ENST00000631057 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
GPC3-204ENST00000631057 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
GPC3-204ENST00000631057 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
GPC3-204ENST00000631057 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
GPC3-204ENST00000631057 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
GPC3-204ENST00000631057 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
GPC3-204ENST00000631057 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
GPC3-204ENST00000631057 SAMD9Q5K651 1589 aa11.79□□□□□ -0.52
GPC3-204ENST00000631057 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
GPC3-204ENST00000631057 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
GPC3-204ENST00000631057 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
GPC3-204ENST00000631057 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
GPC3-204ENST00000631057 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
GPC3-204ENST00000631057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
GPC3-204ENST00000631057 ERCC6Q03468 1493 aa11.77□□□□□ -0.53
GPC3-204ENST00000631057 ITGAEP38570 1179 aa11.76□□□□□ -0.53
GPC3-204ENST00000631057 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
GPC3-204ENST00000631057 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
GPC3-204ENST00000631057 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
GPC3-204ENST00000631057 MIER1Q8N108 512 aa11.75□□□□□ -0.53
GPC3-204ENST00000631057 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
GPC3-204ENST00000631057 MAPKBP1O60336 1514 aa11.75□□□□□ -0.53
GPC3-204ENST00000631057 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
GPC3-204ENST00000631057 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
GPC3-204ENST00000631057 LRRIQ1Q96JM4 1722 aa11.73□□□□□ -0.53
GPC3-204ENST00000631057 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
GPC3-204ENST00000631057 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
GPC3-204ENST00000631057 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
GPC3-204ENST00000631057 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
GPC3-204ENST00000631057 WDR62O43379 1518 aa11.72□□□□□ -0.53
GPC3-204ENST00000631057 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
GPC3-204ENST00000631057 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
GPC3-204ENST00000631057 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
GPC3-204ENST00000631057 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
GPC3-204ENST00000631057 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
GPC3-204ENST00000631057 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
GPC3-204ENST00000631057 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
GPC3-204ENST00000631057 CCDC18Q5T9S5 1454 aa11.66□□□□□ -0.54
GPC3-204ENST00000631057 IFT140Q96RY7 1462 aa11.66□□□□□ -0.54
GPC3-204ENST00000631057 IQGAP2Q13576 1575 aa11.65□□□□□ -0.54
GPC3-204ENST00000631057 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
GPC3-204ENST00000631057 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
GPC3-204ENST00000631057 NCOA2Q15596 1464 aa11.64□□□□□ -0.55
GPC3-204ENST00000631057 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
GPC3-204ENST00000631057 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
GPC3-204ENST00000631057 PTPN23Q9H3S7 1636 aa11.62□□□□□ -0.55
GPC3-204ENST00000631057 UGGT2Q9NYU1 1516 aa11.61□□□□□ -0.55
GPC3-204ENST00000631057 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
GPC3-204ENST00000631057 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
GPC3-204ENST00000631057 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
GPC3-204ENST00000631057 UACAQ9BZF9 1416 aa11.57□□□□□ -0.56
GPC3-204ENST00000631057 TCOF1Q13428 1488 aaKnown RBP11.57□□□□□ -0.56
GPC3-204ENST00000631057 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
GPC3-204ENST00000631057 SIN3AQ96ST3 1273 aa11.56□□□□□ -0.56
GPC3-204ENST00000631057 EPRSP07814 1512 aaKnown RBP11.55□□□□□ -0.56
GPC3-204ENST00000631057 NAIPQ13075 1403 aa11.55□□□□□ -0.56
GPC3-204ENST00000631057 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
GPC3-204ENST00000631057 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
GPC3-204ENST00000631057 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
GPC3-204ENST00000631057 KIAA0556O60303 1618 aa11.52□□□□□ -0.56
GPC3-204ENST00000631057 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
GPC3-204ENST00000631057 MIA2Q96PC5 1412 aa11.52□□□□□ -0.57
GPC3-204ENST00000631057 TONSLQ96HA7 1378 aa11.52□□□□□ -0.57
GPC3-204ENST00000631057 KIAA0586Q9BVV6 1533 aa11.51□□□□□ -0.57
GPC3-204ENST00000631057 CDK13Q14004 1512 aaKnown RBP11.51□□□□□ -0.57
GPC3-204ENST00000631057 ZNF608Q9ULD9 1512 aaPredicted RBP11.51□□□□□ -0.57
GPC3-204ENST00000631057 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
GPC3-204ENST00000631057 CNKSR2Q8WXI2 1034 aa11.5□□□□□ -0.57
GPC3-204ENST00000631057 RAPGEF6Q8TEU7 1601 aa11.48□□□□□ -0.57
GPC3-204ENST00000631057 GRIN2AQ12879 1464 aa11.48□□□□□ -0.57
GPC3-204ENST00000631057 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms