RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
SOX9-AS1-218ENST00000628742 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SOX9-AS1-218ENST00000628742 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
SOX9-AS1-218ENST00000628742 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
SOX9-AS1-218ENST00000628742 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
SOX9-AS1-218ENST00000628742 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
SOX9-AS1-218ENST00000628742 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
SOX9-AS1-218ENST00000628742 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
SOX9-AS1-218ENST00000628742 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
SOX9-AS1-218ENST00000628742 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
SOX9-AS1-218ENST00000628742 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
SOX9-AS1-218ENST00000628742 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
SOX9-AS1-218ENST00000628742 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
SOX9-AS1-218ENST00000628742 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
SOX9-AS1-218ENST00000628742 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
SOX9-AS1-218ENST00000628742 PRG4Q92954 1404 aaPredicted RBP12.39□□□□□ -0.43
SOX9-AS1-218ENST00000628742 DIP2BQ9P265 1576 aa12.37□□□□□ -0.43
SOX9-AS1-218ENST00000628742 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
SOX9-AS1-218ENST00000628742 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
SOX9-AS1-218ENST00000628742 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
SOX9-AS1-218ENST00000628742 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
SOX9-AS1-218ENST00000628742 IGF1RP08069 1367 aa12.28□□□□□ -0.44
SOX9-AS1-218ENST00000628742 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
SOX9-AS1-218ENST00000628742 FAM69CQ0P6D2 419 aa12.25□□□□□ -0.45
SOX9-AS1-218ENST00000628742 CUL7Q14999 1698 aa12.25□□□□□ -0.45
SOX9-AS1-218ENST00000628742 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
SOX9-AS1-218ENST00000628742 GLI2P10070 1586 aa12.24□□□□□ -0.45
SOX9-AS1-218ENST00000628742 KDM6BO15054 1643 aa12.23□□□□□ -0.45
SOX9-AS1-218ENST00000628742 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
SOX9-AS1-218ENST00000628742 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
SOX9-AS1-218ENST00000628742 ABCC2Q92887 1545 aa12.21□□□□□ -0.45
SOX9-AS1-218ENST00000628742 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
SOX9-AS1-218ENST00000628742 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
SOX9-AS1-218ENST00000628742 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
SOX9-AS1-218ENST00000628742 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
SOX9-AS1-218ENST00000628742 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
SOX9-AS1-218ENST00000628742 KCNA4P22459 653 aa12.16□□□□□ -0.46
SOX9-AS1-218ENST00000628742 PTPRGP23470 1445 aa12.16□□□□□ -0.46
SOX9-AS1-218ENST00000628742 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
SOX9-AS1-218ENST00000628742 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
SOX9-AS1-218ENST00000628742 DISP1Q96F81 1524 aa12.14□□□□□ -0.47
SOX9-AS1-218ENST00000628742 ASXL2Q76L83 1435 aa12.13□□□□□ -0.47
SOX9-AS1-218ENST00000628742 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
SOX9-AS1-218ENST00000628742 COL17A1Q9UMD9 1497 aaPredicted RBP12.13□□□□□ -0.47
SOX9-AS1-218ENST00000628742 MAP3K4Q9Y6R4 1608 aa12.12□□□□□ -0.47
SOX9-AS1-218ENST00000628742 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
SOX9-AS1-218ENST00000628742 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
SOX9-AS1-218ENST00000628742 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
SOX9-AS1-218ENST00000628742 UGGT2Q9NYU1 1516 aa12.11□□□□□ -0.47
SOX9-AS1-218ENST00000628742 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
SOX9-AS1-218ENST00000628742 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
SOX9-AS1-218ENST00000628742 TSPOAP1O95153 1857 aa12.09□□□□□ -0.47
SOX9-AS1-218ENST00000628742 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
SOX9-AS1-218ENST00000628742 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
SOX9-AS1-218ENST00000628742 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
SOX9-AS1-218ENST00000628742 KIAA0556O60303 1618 aa12.03□□□□□ -0.48
SOX9-AS1-218ENST00000628742 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.48
SOX9-AS1-218ENST00000628742 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
SOX9-AS1-218ENST00000628742 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
SOX9-AS1-218ENST00000628742 WDR7Q9Y4E6 1490 aa12.01□□□□□ -0.49
SOX9-AS1-218ENST00000628742 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
SOX9-AS1-218ENST00000628742 HECW2Q9P2P5 1572 aa11.99□□□□□ -0.49
SOX9-AS1-218ENST00000628742 ABCA8O94911 1581 aa11.97□□□□□ -0.49
SOX9-AS1-218ENST00000628742 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
SOX9-AS1-218ENST00000628742 ARAP3Q8WWN8 1544 aa11.95□□□□□ -0.5
SOX9-AS1-218ENST00000628742 GOLGA3Q08378 1498 aa11.92□□□□□ -0.5
SOX9-AS1-218ENST00000628742 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
SOX9-AS1-218ENST00000628742 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
SOX9-AS1-218ENST00000628742 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
SOX9-AS1-218ENST00000628742 PHLDB1Q86UU1 1377 aa11.9□□□□□ -0.5
SOX9-AS1-218ENST00000628742 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
SOX9-AS1-218ENST00000628742 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
SOX9-AS1-218ENST00000628742 ATP10BO94823 1461 aa11.83□□□□□ -0.52
SOX9-AS1-218ENST00000628742 NEO1Q92859 1461 aa11.83□□□□□ -0.52
SOX9-AS1-218ENST00000628742 KIF21BO75037 1637 aa11.82□□□□□ -0.52
SOX9-AS1-218ENST00000628742 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
SOX9-AS1-218ENST00000628742 SAMD9Q5K651 1589 aa11.81□□□□□ -0.52
SOX9-AS1-218ENST00000628742 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
SOX9-AS1-218ENST00000628742 PTPRMP28827 1452 aa11.81□□□□□ -0.52
SOX9-AS1-218ENST00000628742 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
SOX9-AS1-218ENST00000628742 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.53
SOX9-AS1-218ENST00000628742 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
SOX9-AS1-218ENST00000628742 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
SOX9-AS1-218ENST00000628742 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
SOX9-AS1-218ENST00000628742 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
SOX9-AS1-218ENST00000628742 NUP153P49790 1475 aaKnown RBP11.74□□□□□ -0.53
SOX9-AS1-218ENST00000628742 ZMYM4Q5VZL5 1548 aa11.74□□□□□ -0.53
SOX9-AS1-218ENST00000628742 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
SOX9-AS1-218ENST00000628742 RAPGEF6Q8TEU7 1601 aa11.72□□□□□ -0.53
SOX9-AS1-218ENST00000628742 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
SOX9-AS1-218ENST00000628742 MADDQ8WXG6 1647 aa11.71□□□□□ -0.54
SOX9-AS1-218ENST00000628742 RNF39Q9H2S5 420 aa11.7□□□□□ -0.54
SOX9-AS1-218ENST00000628742 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
SOX9-AS1-218ENST00000628742 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
SOX9-AS1-218ENST00000628742 MAGI2Q86UL8 1455 aa11.69□□□□□ -0.54
SOX9-AS1-218ENST00000628742 DENND4BO75064 1496 aaPredicted RBP11.66□□□□□ -0.54
SOX9-AS1-218ENST00000628742 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
SOX9-AS1-218ENST00000628742 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
SOX9-AS1-218ENST00000628742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
SOX9-AS1-218ENST00000628742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms