RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
SOX9-AS1-218ENST00000628742 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
SOX9-AS1-218ENST00000628742 NISCHQ9Y2I1 1504 aa17.65■□□□□ 0.42
SOX9-AS1-218ENST00000628742 ABCC9O60706 1549 aa15.99■□□□□ 0.15
SOX9-AS1-218ENST00000628742 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
SOX9-AS1-218ENST00000628742 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
SOX9-AS1-218ENST00000628742 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
SOX9-AS1-218ENST00000628742 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
SOX9-AS1-218ENST00000628742 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
SOX9-AS1-218ENST00000628742 NACADO15069 1562 aa15.15■□□□□ 0.02
SOX9-AS1-218ENST00000628742 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
SOX9-AS1-218ENST00000628742 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
SOX9-AS1-218ENST00000628742 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
SOX9-AS1-218ENST00000628742 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
SOX9-AS1-218ENST00000628742 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
SOX9-AS1-218ENST00000628742 FOXD1Q16676 465 aa14.72□□□□□ -0.05
SOX9-AS1-218ENST00000628742 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.06
SOX9-AS1-218ENST00000628742 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
SOX9-AS1-218ENST00000628742 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
SOX9-AS1-218ENST00000628742 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.09
SOX9-AS1-218ENST00000628742 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
SOX9-AS1-218ENST00000628742 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
SOX9-AS1-218ENST00000628742 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
SOX9-AS1-218ENST00000628742 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
SOX9-AS1-218ENST00000628742 DNAJC5Q9H3Z4 198 aa14.22□□□□□ -0.13
SOX9-AS1-218ENST00000628742 CUX2O14529 1486 aa14.02□□□□□ -0.16
SOX9-AS1-218ENST00000628742 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
SOX9-AS1-218ENST00000628742 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
SOX9-AS1-218ENST00000628742 ADRA2BP18089 450 aa13.94□□□□□ -0.18
SOX9-AS1-218ENST00000628742 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
SOX9-AS1-218ENST00000628742 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
SOX9-AS1-218ENST00000628742 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
SOX9-AS1-218ENST00000628742 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
SOX9-AS1-218ENST00000628742 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
SOX9-AS1-218ENST00000628742 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
SOX9-AS1-218ENST00000628742 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
SOX9-AS1-218ENST00000628742 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
SOX9-AS1-218ENST00000628742 NESP48681 1621 aa13.71□□□□□ -0.22
SOX9-AS1-218ENST00000628742 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
SOX9-AS1-218ENST00000628742 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
SOX9-AS1-218ENST00000628742 MSH5O43196 834 aa13.67□□□□□ -0.22
SOX9-AS1-218ENST00000628742 BAZ1BQ9UIG0 1483 aaKnown RBP13.66□□□□□ -0.22
SOX9-AS1-218ENST00000628742 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
SOX9-AS1-218ENST00000628742 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
SOX9-AS1-218ENST00000628742 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
SOX9-AS1-218ENST00000628742 WDR62O43379 1518 aa13.5□□□□□ -0.25
SOX9-AS1-218ENST00000628742 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
SOX9-AS1-218ENST00000628742 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
SOX9-AS1-218ENST00000628742 CFTRP13569 1480 aa13.36□□□□□ -0.27
SOX9-AS1-218ENST00000628742 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SOX9-AS1-218ENST00000628742 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
SOX9-AS1-218ENST00000628742 WIZO95785 1651 aa13.31□□□□□ -0.28
SOX9-AS1-218ENST00000628742 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
SOX9-AS1-218ENST00000628742 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
SOX9-AS1-218ENST00000628742 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
SOX9-AS1-218ENST00000628742 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
SOX9-AS1-218ENST00000628742 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
SOX9-AS1-218ENST00000628742 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
SOX9-AS1-218ENST00000628742 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
SOX9-AS1-218ENST00000628742 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
SOX9-AS1-218ENST00000628742 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
SOX9-AS1-218ENST00000628742 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
SOX9-AS1-218ENST00000628742 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
SOX9-AS1-218ENST00000628742 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
SOX9-AS1-218ENST00000628742 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
SOX9-AS1-218ENST00000628742 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
SOX9-AS1-218ENST00000628742 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
SOX9-AS1-218ENST00000628742 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
SOX9-AS1-218ENST00000628742 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
SOX9-AS1-218ENST00000628742 TARBP1Q13395 1621 aaKnown RBP13.01□□□□□ -0.33
SOX9-AS1-218ENST00000628742 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
SOX9-AS1-218ENST00000628742 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
SOX9-AS1-218ENST00000628742 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
SOX9-AS1-218ENST00000628742 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
SOX9-AS1-218ENST00000628742 CHD1O14646 1710 aa12.9□□□□□ -0.34
SOX9-AS1-218ENST00000628742 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.35
SOX9-AS1-218ENST00000628742 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
SOX9-AS1-218ENST00000628742 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
SOX9-AS1-218ENST00000628742 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-218ENST00000628742 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
SOX9-AS1-218ENST00000628742 SOGA1O94964 1423 aa12.79□□□□□ -0.36
SOX9-AS1-218ENST00000628742 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
SOX9-AS1-218ENST00000628742 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
SOX9-AS1-218ENST00000628742 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
SOX9-AS1-218ENST00000628742 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
SOX9-AS1-218ENST00000628742 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
SOX9-AS1-218ENST00000628742 CUX1P39880 1505 aa12.75□□□□□ -0.37
SOX9-AS1-218ENST00000628742 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
SOX9-AS1-218ENST00000628742 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
SOX9-AS1-218ENST00000628742 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-218ENST00000628742 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
SOX9-AS1-218ENST00000628742 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
SOX9-AS1-218ENST00000628742 ABCA5Q8WWZ7 1642 aa12.68□□□□□ -0.38
SOX9-AS1-218ENST00000628742 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
SOX9-AS1-218ENST00000628742 FBLN2P98095 1184 aa12.66□□□□□ -0.38
SOX9-AS1-218ENST00000628742 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
SOX9-AS1-218ENST00000628742 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
SOX9-AS1-218ENST00000628742 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
SOX9-AS1-218ENST00000628742 NUP160Q12769 1436 aa12.63□□□□□ -0.39
SOX9-AS1-218ENST00000628742 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms