RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
RAB5B-211ENST00000628569 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
RAB5B-211ENST00000628569 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
RAB5B-211ENST00000628569 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
RAB5B-211ENST00000628569 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
RAB5B-211ENST00000628569 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
RAB5B-211ENST00000628569 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
RAB5B-211ENST00000628569 RANGAP1P46060 587 aaPredicted RBP20.2■□□□□ 0.82
RAB5B-211ENST00000628569 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
RAB5B-211ENST00000628569 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
RAB5B-211ENST00000628569 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
RAB5B-211ENST00000628569 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
RAB5B-211ENST00000628569 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
RAB5B-211ENST00000628569 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
RAB5B-211ENST00000628569 NUP160Q12769 1436 aa20.13■□□□□ 0.81
RAB5B-211ENST00000628569 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
RAB5B-211ENST00000628569 FHOD3Q2V2M9 1422 aa20.11■□□□□ 0.81
RAB5B-211ENST00000628569 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
RAB5B-211ENST00000628569 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
RAB5B-211ENST00000628569 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
RAB5B-211ENST00000628569 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
RAB5B-211ENST00000628569 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
RAB5B-211ENST00000628569 APLP2Q06481 763 aa20.08■□□□□ 0.81
RAB5B-211ENST00000628569 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
RAB5B-211ENST00000628569 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
RAB5B-211ENST00000628569 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
RAB5B-211ENST00000628569 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
RAB5B-211ENST00000628569 DISP1Q96F81 1524 aa20.02■□□□□ 0.8
RAB5B-211ENST00000628569 CHD1O14646 1710 aa20.02■□□□□ 0.8
RAB5B-211ENST00000628569 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
RAB5B-211ENST00000628569 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
RAB5B-211ENST00000628569 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
RAB5B-211ENST00000628569 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
RAB5B-211ENST00000628569 TRHP20396 242 aaPredicted RBP19.93■□□□□ 0.78
RAB5B-211ENST00000628569 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
RAB5B-211ENST00000628569 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
RAB5B-211ENST00000628569 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
RAB5B-211ENST00000628569 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
RAB5B-211ENST00000628569 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
RAB5B-211ENST00000628569 FBLN2P98095 1184 aa19.9■□□□□ 0.78
RAB5B-211ENST00000628569 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
RAB5B-211ENST00000628569 CARMIL2Q6F5E8 1435 aa19.88■□□□□ 0.77
RAB5B-211ENST00000628569 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
RAB5B-211ENST00000628569 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
RAB5B-211ENST00000628569 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
RAB5B-211ENST00000628569 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
RAB5B-211ENST00000628569 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
RAB5B-211ENST00000628569 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
RAB5B-211ENST00000628569 EHBP1L1Q8N3D4 1523 aa19.81■□□□□ 0.76
RAB5B-211ENST00000628569 NUP153P49790 1475 aaKnown RBP19.77■□□□□ 0.76
RAB5B-211ENST00000628569 ABCA8O94911 1581 aa19.76■□□□□ 0.75
RAB5B-211ENST00000628569 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
RAB5B-211ENST00000628569 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
RAB5B-211ENST00000628569 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
RAB5B-211ENST00000628569 HRCP23327 699 aa19.75■□□□□ 0.75
RAB5B-211ENST00000628569 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
RAB5B-211ENST00000628569 MAGI3Q5TCQ9 1506 aa19.75■□□□□ 0.75
RAB5B-211ENST00000628569 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
RAB5B-211ENST00000628569 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
RAB5B-211ENST00000628569 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
RAB5B-211ENST00000628569 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
RAB5B-211ENST00000628569 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
RAB5B-211ENST00000628569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
RAB5B-211ENST00000628569 PLB1Q6P1J6 1458 aa19.69■□□□□ 0.74
RAB5B-211ENST00000628569 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
RAB5B-211ENST00000628569 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
RAB5B-211ENST00000628569 PTPRGP23470 1445 aa19.63■□□□□ 0.73
RAB5B-211ENST00000628569 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
RAB5B-211ENST00000628569 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
RAB5B-211ENST00000628569 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
RAB5B-211ENST00000628569 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.72
RAB5B-211ENST00000628569 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
RAB5B-211ENST00000628569 ATP10BO94823 1461 aa19.56■□□□□ 0.72
RAB5B-211ENST00000628569 TCOF1Q13428 1488 aaKnown RBP19.56■□□□□ 0.72
RAB5B-211ENST00000628569 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
RAB5B-211ENST00000628569 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
RAB5B-211ENST00000628569 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
RAB5B-211ENST00000628569 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
RAB5B-211ENST00000628569 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
RAB5B-211ENST00000628569 MIA2Q96PC5 1412 aa19.54■□□□□ 0.72
RAB5B-211ENST00000628569 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
RAB5B-211ENST00000628569 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
RAB5B-211ENST00000628569 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
RAB5B-211ENST00000628569 KIF14Q15058 1648 aa19.48■□□□□ 0.71
RAB5B-211ENST00000628569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
RAB5B-211ENST00000628569 ABCC10Q5T3U5 1492 aa19.45■□□□□ 0.7
RAB5B-211ENST00000628569 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
RAB5B-211ENST00000628569 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
RAB5B-211ENST00000628569 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
RAB5B-211ENST00000628569 ZCCHC11Q5TAX3 1644 aaKnown RBP19.41■□□□□ 0.7
RAB5B-211ENST00000628569 PLEKHD1A6NEE1 506 aa19.41■□□□□ 0.7
RAB5B-211ENST00000628569 CCER1Q8TC90 406 aaPredicted RBP19.41■□□□□ 0.7
RAB5B-211ENST00000628569 CDC42BPAQ5VT25 1732 aa19.41■□□□□ 0.7
RAB5B-211ENST00000628569 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
RAB5B-211ENST00000628569 SETD5Q9C0A6 1442 aa19.38■□□□□ 0.69
RAB5B-211ENST00000628569 DNMT1P26358 1616 aaKnown RBP19.37■□□□□ 0.69
RAB5B-211ENST00000628569 PTPRKQ15262 1439 aa19.37■□□□□ 0.69
RAB5B-211ENST00000628569 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
RAB5B-211ENST00000628569 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
RAB5B-211ENST00000628569 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms