RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■■■■■ 28.4
PTP4A1-206ENST00000627002 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
PTP4A1-206ENST00000627002 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
PTP4A1-206ENST00000627002 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
PTP4A1-206ENST00000627002 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
PTP4A1-206ENST00000627002 CLIP1P30622 1438 aa11.95□□□□□ -0.5
PTP4A1-206ENST00000627002 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
PTP4A1-206ENST00000627002 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
PTP4A1-206ENST00000627002 MAGI1Q96QZ7 1491 aaPredicted RBP11.93□□□□□ -0.5
PTP4A1-206ENST00000627002 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
PTP4A1-206ENST00000627002 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
PTP4A1-206ENST00000627002 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-206ENST00000627002 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
PTP4A1-206ENST00000627002 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
PTP4A1-206ENST00000627002 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
PTP4A1-206ENST00000627002 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
PTP4A1-206ENST00000627002 VPS8Q8N3P4 1428 aa11.85□□□□□ -0.51
PTP4A1-206ENST00000627002 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
PTP4A1-206ENST00000627002 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
PTP4A1-206ENST00000627002 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
PTP4A1-206ENST00000627002 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
PTP4A1-206ENST00000627002 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
PTP4A1-206ENST00000627002 FBLN2P98095 1184 aa11.8□□□□□ -0.52
PTP4A1-206ENST00000627002 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
PTP4A1-206ENST00000627002 NUP160Q12769 1436 aa11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 CYB5RLQ6IPT4 315 aa11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
PTP4A1-206ENST00000627002 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
PTP4A1-206ENST00000627002 UGGT2Q9NYU1 1516 aa11.76□□□□□ -0.53
PTP4A1-206ENST00000627002 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
PTP4A1-206ENST00000627002 APLP2Q06481 763 aa11.75□□□□□ -0.53
PTP4A1-206ENST00000627002 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
PTP4A1-206ENST00000627002 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
PTP4A1-206ENST00000627002 FHOD3Q2V2M9 1422 aa11.73□□□□□ -0.53
PTP4A1-206ENST00000627002 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
PTP4A1-206ENST00000627002 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
PTP4A1-206ENST00000627002 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
PTP4A1-206ENST00000627002 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
PTP4A1-206ENST00000627002 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
PTP4A1-206ENST00000627002 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
PTP4A1-206ENST00000627002 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
PTP4A1-206ENST00000627002 DISP1Q96F81 1524 aa11.67□□□□□ -0.54
PTP4A1-206ENST00000627002 CHD1O14646 1710 aa11.67□□□□□ -0.54
PTP4A1-206ENST00000627002 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
PTP4A1-206ENST00000627002 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-206ENST00000627002 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-206ENST00000627002 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
PTP4A1-206ENST00000627002 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-206ENST00000627002 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
PTP4A1-206ENST00000627002 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
PTP4A1-206ENST00000627002 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
PTP4A1-206ENST00000627002 TIAM1Q13009 1591 aa11.61□□□□□ -0.55
PTP4A1-206ENST00000627002 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
PTP4A1-206ENST00000627002 CCDC18Q5T9S5 1454 aa11.59□□□□□ -0.55
PTP4A1-206ENST00000627002 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
PTP4A1-206ENST00000627002 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
PTP4A1-206ENST00000627002 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
PTP4A1-206ENST00000627002 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.56
PTP4A1-206ENST00000627002 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
PTP4A1-206ENST00000627002 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
PTP4A1-206ENST00000627002 PTPRGP23470 1445 aa11.55□□□□□ -0.56
PTP4A1-206ENST00000627002 RAPGEF6Q8TEU7 1601 aa11.54□□□□□ -0.56
PTP4A1-206ENST00000627002 EPRSP07814 1512 aaKnown RBP11.54□□□□□ -0.56
PTP4A1-206ENST00000627002 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
PTP4A1-206ENST00000627002 NUP153P49790 1475 aaKnown RBP11.52□□□□□ -0.56
PTP4A1-206ENST00000627002 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
PTP4A1-206ENST00000627002 ABCA8O94911 1581 aa11.51□□□□□ -0.57
PTP4A1-206ENST00000627002 EHBP1L1Q8N3D4 1523 aa11.5□□□□□ -0.57
PTP4A1-206ENST00000627002 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1-206ENST00000627002 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
PTP4A1-206ENST00000627002 UACAQ9BZF9 1416 aa11.48□□□□□ -0.57
PTP4A1-206ENST00000627002 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
PTP4A1-206ENST00000627002 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
PTP4A1-206ENST00000627002 ERCC6L2Q5T890 1561 aa11.47□□□□□ -0.57
PTP4A1-206ENST00000627002 RRBP1Q9P2E9 1410 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-206ENST00000627002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
PTP4A1-206ENST00000627002 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
PTP4A1-206ENST00000627002 CCNB3Q8WWL7 1395 aa11.45□□□□□ -0.58
PTP4A1-206ENST00000627002 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 MAGI3Q5TCQ9 1506 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 ABCC2Q92887 1545 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 UHRF1BP1LA0JNW5 1464 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 ATP10BO94823 1461 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
PTP4A1-206ENST00000627002 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
PTP4A1-206ENST00000627002 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
PTP4A1-206ENST00000627002 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
PTP4A1-206ENST00000627002 MYOM3Q5VTT5 1437 aa11.41□□□□□ -0.58
PTP4A1-206ENST00000627002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTP4A1-206ENST00000627002 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
PTP4A1-206ENST00000627002 MIA2Q96PC5 1412 aa11.37□□□□□ -0.59
PTP4A1-206ENST00000627002 KDM5BQ9UGL1 1544 aa11.37□□□□□ -0.59
PTP4A1-206ENST00000627002 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
PTP4A1-206ENST00000627002 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
PTP4A1-206ENST00000627002 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-206ENST00000627002 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms