RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 PRG4Q92954 1404 aaPredicted RBP34.31■■■■□ 3.08
R3HCC1-210ENST00000625275 JPH4Q96JJ6 628 aa34.25■■■■□ 3.07
R3HCC1-210ENST00000625275 KIAA0586Q9BVV6 1533 aa34.2■■■■□ 3.07
R3HCC1-210ENST00000625275 CARMIL1Q5VZK9 1371 aa34.12■■■■□ 3.05
R3HCC1-210ENST00000625275 KIF13AQ9H1H9 1805 aa34.04■■■■□ 3.04
R3HCC1-210ENST00000625275 ADCY10Q96PN6 1610 aa33.99■■■■□ 3.03
R3HCC1-210ENST00000625275 IQGAP2Q13576 1575 aa33.99■■■■□ 3.03
R3HCC1-210ENST00000625275 RAPGEF2Q9Y4G8 1499 aa33.89■■■■□ 3.02
R3HCC1-210ENST00000625275 MAPKBP1O60336 1514 aa33.88■■■■□ 3.01
R3HCC1-210ENST00000625275 CARMIL2Q6F5E8 1435 aa33.84■■■■□ 3.01
R3HCC1-210ENST00000625275 CTTNBP2Q8WZ74 1663 aa33.81■■■■□ 3
R3HCC1-210ENST00000625275 NPM1P06748 294 aaKnown RBP eCLIP33.8■■■■□ 3
R3HCC1-210ENST00000625275 PTPRGP23470 1445 aa33.78■■■■□ 3
R3HCC1-210ENST00000625275 DIP2BQ9P265 1576 aa33.77■■■■□ 3
R3HCC1-210ENST00000625275 TNIKQ9UKE5 1360 aa33.76■■■■□ 3
R3HCC1-210ENST00000625275 ABCC10Q5T3U5 1492 aa33.76■■■□□ 2.99
R3HCC1-210ENST00000625275 DISP1Q96F81 1524 aa33.74■■■□□ 2.99
R3HCC1-210ENST00000625275 UGGT2Q9NYU1 1516 aa33.74■■■□□ 2.99
R3HCC1-210ENST00000625275 KIAA0556O60303 1618 aa33.68■■■□□ 2.98
R3HCC1-210ENST00000625275 TTBK1Q5TCY1 1321 aaPredicted RBP33.65■■■□□ 2.98
R3HCC1-210ENST00000625275 ABCC2Q92887 1545 aa33.64■■■□□ 2.98
R3HCC1-210ENST00000625275 FAM69CQ0P6D2 419 aa33.63■■■□□ 2.97
R3HCC1-210ENST00000625275 UHRF1BP1LA0JNW5 1464 aa33.61■■■□□ 2.97
R3HCC1-210ENST00000625275 PRXQ9BXM0 1461 aa33.61■■■□□ 2.97
R3HCC1-210ENST00000625275 TSPOAP1O95153 1857 aa33.6■■■□□ 2.97
R3HCC1-210ENST00000625275 UACAQ9BZF9 1416 aa33.57■■■□□ 2.96
R3HCC1-210ENST00000625275 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
R3HCC1-210ENST00000625275 ZCCHC11Q5TAX3 1644 aaKnown RBP33.48■■■□□ 2.95
R3HCC1-210ENST00000625275 GOLGA3Q08378 1498 aa33.47■■■□□ 2.95
R3HCC1-210ENST00000625275 ASXL2Q76L83 1435 aa33.47■■■□□ 2.95
R3HCC1-210ENST00000625275 PLB1Q6P1J6 1458 aa33.46■■■□□ 2.95
R3HCC1-210ENST00000625275 KDM5BQ9UGL1 1544 aa33.45■■■□□ 2.95
R3HCC1-210ENST00000625275 GLI2P10070 1586 aa33.42■■■□□ 2.94
R3HCC1-210ENST00000625275 KDM6BO15054 1643 aa33.41■■■□□ 2.94
R3HCC1-210ENST00000625275 PPRC1Q5VV67 1664 aaKnown RBP33.37■■■□□ 2.93
R3HCC1-210ENST00000625275 ABCA8O94911 1581 aa33.34■■■□□ 2.93
R3HCC1-210ENST00000625275 EEA1Q15075 1411 aa33.33■■■□□ 2.93
R3HCC1-210ENST00000625275 CSRNP3Q8WYN3 585 aa33.31■■■□□ 2.92
R3HCC1-210ENST00000625275 MAP3K4Q9Y6R4 1608 aa33.3■■■□□ 2.92
R3HCC1-210ENST00000625275 EPRSP07814 1512 aaKnown RBP33.29■■■□□ 2.92
R3HCC1-210ENST00000625275 AEBP2Q6ZN18 517 aaPredicted RBP33.25■■■□□ 2.91
R3HCC1-210ENST00000625275 SAMD9Q5K651 1589 aa33.24■■■□□ 2.91
R3HCC1-210ENST00000625275 WDR7Q9Y4E6 1490 aa33.22■■■□□ 2.91
R3HCC1-210ENST00000625275 KIF21BO75037 1637 aa33.14■■■□□ 2.9
R3HCC1-210ENST00000625275 CFAP43Q8NDM7 1665 aa33.12■■■□□ 2.89
R3HCC1-210ENST00000625275 TEX14Q8IWB6 1497 aa33.11■■■□□ 2.89
R3HCC1-210ENST00000625275 P3H3Q8IVL6 736 aa33.07■■■□□ 2.88
R3HCC1-210ENST00000625275 RAPGEF6Q8TEU7 1601 aa33.06■■■□□ 2.88
R3HCC1-210ENST00000625275 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
R3HCC1-210ENST00000625275 ATP10BO94823 1461 aa32.98■■■□□ 2.87
R3HCC1-210ENST00000625275 COL17A1Q9UMD9 1497 aaPredicted RBP32.97■■■□□ 2.87
R3HCC1-210ENST00000625275 MAGI3Q5TCQ9 1506 aa32.95■■■□□ 2.86
R3HCC1-210ENST00000625275 EFCAB5A4FU69 1503 aa32.94■■■□□ 2.86
R3HCC1-210ENST00000625275 CD109Q6YHK3 1445 aa32.93■■■□□ 2.86
R3HCC1-210ENST00000625275 KCNH8Q96L42 1107 aa32.93■■■□□ 2.86
R3HCC1-210ENST00000625275 FHOD3Q2V2M9 1422 aa32.92■■■□□ 2.86
R3HCC1-210ENST00000625275 ARID3CA6NKF2 412 aa32.91■■■□□ 2.86
R3HCC1-210ENST00000625275 RANGAP1P46060 587 aaPredicted RBP32.88■■■□□ 2.85
R3HCC1-210ENST00000625275 ABCA9Q8IUA7 1624 aa32.87■■■□□ 2.85
R3HCC1-210ENST00000625275 NUP153P49790 1475 aaKnown RBP32.86■■■□□ 2.85
R3HCC1-210ENST00000625275 KDM4FA0A1W2PPD8 638 aa32.79■■■□□ 2.84
R3HCC1-210ENST00000625275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.72■■■□□ 2.83
R3HCC1-210ENST00000625275 HNRNPUL2Q1KMD3 747 aaKnown RBP32.72■■■□□ 2.83
R3HCC1-210ENST00000625275 ADGRL1O94910 1474 aa32.7■■■□□ 2.83
R3HCC1-210ENST00000625275 UBTFP17480 764 aaKnown RBP32.69■■■□□ 2.82
R3HCC1-210ENST00000625275 ARAP3Q8WWN8 1544 aa32.69■■■□□ 2.82
R3HCC1-210ENST00000625275 EHMT2Q96KQ7 1210 aa32.67■■■□□ 2.82
R3HCC1-210ENST00000625275 ARHGAP35Q9NRY4 1499 aa32.62■■■□□ 2.81
R3HCC1-210ENST00000625275 PHLDB1Q86UU1 1377 aa32.61■■■□□ 2.81
R3HCC1-210ENST00000625275 NEO1Q92859 1461 aa32.6■■■□□ 2.81
R3HCC1-210ENST00000625275 HECW1Q76N89 1606 aa32.6■■■□□ 2.81
R3HCC1-210ENST00000625275 CDK13Q14004 1512 aaKnown RBP32.59■■■□□ 2.81
R3HCC1-210ENST00000625275 FMN1Q68DA7 1419 aa32.57■■■□□ 2.8
R3HCC1-210ENST00000625275 PLEKHD1A6NEE1 506 aa32.56■■■□□ 2.8
R3HCC1-210ENST00000625275 TTC37Q6PGP7 1564 aa32.55■■■□□ 2.8
R3HCC1-210ENST00000625275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.54■■■□□ 2.8
R3HCC1-210ENST00000625275 CFAP74Q9C0B2 1584 aa32.53■■■□□ 2.8
R3HCC1-210ENST00000625275 FRMPD1Q5SYB0 1578 aa32.51■■■□□ 2.79
R3HCC1-210ENST00000625275 LRRIQ1Q96JM4 1722 aa32.48■■■□□ 2.79
R3HCC1-210ENST00000625275 RICTORQ6R327 1708 aa32.46■■■□□ 2.79
R3HCC1-210ENST00000625275 FANCAO15360 1455 aa32.41■■■□□ 2.78
R3HCC1-210ENST00000625275 MYO5CQ9NQX4 1742 aa32.41■■■□□ 2.78
R3HCC1-210ENST00000625275 RAPGEF3O95398 923 aa32.4■■■□□ 2.78
R3HCC1-210ENST00000625275 ATP1B4Q9UN42 357 aaPredicted RBP32.37■■■□□ 2.77
R3HCC1-210ENST00000625275 AKNAQ7Z591 1439 aa32.37■■■□□ 2.77
R3HCC1-210ENST00000625275 DENND4BO75064 1496 aaPredicted RBP32.35■■■□□ 2.77
R3HCC1-210ENST00000625275 PCF11O94913 1555 aaKnown RBP32.34■■■□□ 2.77
R3HCC1-210ENST00000625275 KIF14Q15058 1648 aa32.34■■■□□ 2.77
R3HCC1-210ENST00000625275 ARHGEF40Q8TER5 1519 aa32.33■■■□□ 2.77
R3HCC1-210ENST00000625275 ADAMTSL3P82987 1691 aa32.29■■■□□ 2.76
R3HCC1-210ENST00000625275 CDK11AQ9UQ88 783 aaPredicted RBP32.29■■■□□ 2.76
R3HCC1-210ENST00000625275 ZMYM4Q5VZL5 1548 aa32.28■■■□□ 2.76
R3HCC1-210ENST00000625275 PLCH2O75038 1416 aa32.27■■■□□ 2.76
R3HCC1-210ENST00000625275 TROQ12816 1431 aaPredicted RBP32.27■■■□□ 2.76
R3HCC1-210ENST00000625275 BCORL1Q5H9F3 1711 aa32.26■■■□□ 2.76
R3HCC1-210ENST00000625275 CASKIN1Q8WXD9 1431 aa32.24■■■□□ 2.75
R3HCC1-210ENST00000625275 CCDC18Q5T9S5 1454 aa32.23■■■□□ 2.75
R3HCC1-210ENST00000625275 CLIP1P30622 1438 aa32.23■■■□□ 2.75
R3HCC1-210ENST00000625275 HECW2Q9P2P5 1572 aa32.22■■■□□ 2.75
R3HCC1-210ENST00000625275 LOC105371045A0A1W2PR82 267 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms