RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
TRA2A-212ENST00000621813 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
TRA2A-212ENST00000621813 PRKCSHP14314 528 aaPredicted RBP26.16■■□□□ 1.78
TRA2A-212ENST00000621813 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
TRA2A-212ENST00000621813 EFCAB5A4FU69 1503 aa26.15■■□□□ 1.78
TRA2A-212ENST00000621813 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
TRA2A-212ENST00000621813 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
TRA2A-212ENST00000621813 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
TRA2A-212ENST00000621813 TIAM1Q13009 1591 aa26.09■■□□□ 1.77
TRA2A-212ENST00000621813 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.76
TRA2A-212ENST00000621813 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.76
TRA2A-212ENST00000621813 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
TRA2A-212ENST00000621813 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
TRA2A-212ENST00000621813 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
TRA2A-212ENST00000621813 CFAP43Q8NDM7 1665 aa26.02■■□□□ 1.76
TRA2A-212ENST00000621813 PCF11O94913 1555 aaKnown RBP25.98■■□□□ 1.75
TRA2A-212ENST00000621813 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.752e-7■■□□□ 14.5
TRA2A-212ENST00000621813 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
TRA2A-212ENST00000621813 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
TRA2A-212ENST00000621813 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
TRA2A-212ENST00000621813 LRRC9Q6ZRR7 1453 aa25.94■■□□□ 1.74
TRA2A-212ENST00000621813 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
TRA2A-212ENST00000621813 SAMD9Q5K651 1589 aa25.91■■□□□ 1.74
TRA2A-212ENST00000621813 FHOD3Q2V2M9 1422 aa25.9■■□□□ 1.74
TRA2A-212ENST00000621813 FMN1Q68DA7 1419 aa25.9■■□□□ 1.74
TRA2A-212ENST00000621813 CASKIN1Q8WXD9 1431 aa25.9■■□□□ 1.74
TRA2A-212ENST00000621813 WDR62O43379 1518 aa25.88■■□□□ 1.73
TRA2A-212ENST00000621813 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
TRA2A-212ENST00000621813 ANP32EQ9BTT0 268 aa25.84■■□□□ 1.73
TRA2A-212ENST00000621813 IFT140Q96RY7 1462 aa25.83■■□□□ 1.72
TRA2A-212ENST00000621813 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
TRA2A-212ENST00000621813 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
TRA2A-212ENST00000621813 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
TRA2A-212ENST00000621813 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
TRA2A-212ENST00000621813 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
TRA2A-212ENST00000621813 IQGAP2Q13576 1575 aa25.72■■□□□ 1.71
TRA2A-212ENST00000621813 DHX57Q6P158 1386 aaKnown RBP25.7■■□□□ 1.71
TRA2A-212ENST00000621813 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.71
TRA2A-212ENST00000621813 ATP1B4Q9UN42 357 aaPredicted RBP25.68■■□□□ 1.7
TRA2A-212ENST00000621813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.71e-7■■□□□ 12.6
TRA2A-212ENST00000621813 LRRIQ1Q96JM4 1722 aa25.65■■□□□ 1.7
TRA2A-212ENST00000621813 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
TRA2A-212ENST00000621813 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
TRA2A-212ENST00000621813 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
TRA2A-212ENST00000621813 CCDC18Q5T9S5 1454 aa25.59■■□□□ 1.69
TRA2A-212ENST00000621813 UGGT2Q9NYU1 1516 aa25.58■■□□□ 1.69
TRA2A-212ENST00000621813 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
TRA2A-212ENST00000621813 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
TRA2A-212ENST00000621813 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
TRA2A-212ENST00000621813 DIEXFQ68CQ4 756 aaKnown RBP25.56■■□□□ 1.68
TRA2A-212ENST00000621813 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
TRA2A-212ENST00000621813 SETD5Q9C0A6 1442 aa25.54■■□□□ 1.68
TRA2A-212ENST00000621813 ITGAEP38570 1179 aa25.54■■□□□ 1.68
TRA2A-212ENST00000621813 RAB3GAP2Q9H2M9 1393 aa25.53■■□□□ 1.68
TRA2A-212ENST00000621813 KIAA0586Q9BVV6 1533 aa25.52■■□□□ 1.68
TRA2A-212ENST00000621813 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
TRA2A-212ENST00000621813 FGD6Q6ZV73 1430 aa25.51■■□□□ 1.67
TRA2A-212ENST00000621813 MAGI1Q96QZ7 1491 aaPredicted RBP25.51■■□□□ 1.67
TRA2A-212ENST00000621813 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
TRA2A-212ENST00000621813 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
TRA2A-212ENST00000621813 MYOM3Q5VTT5 1437 aa25.44■■□□□ 1.66
TRA2A-212ENST00000621813 KIAA0556O60303 1618 aa25.43■■□□□ 1.66
TRA2A-212ENST00000621813 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
TRA2A-212ENST00000621813 EPRSP07814 1512 aaKnown RBP25.41■■□□□ 1.66
TRA2A-212ENST00000621813 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
TRA2A-212ENST00000621813 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
TRA2A-212ENST00000621813 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
TRA2A-212ENST00000621813 MAGI3Q5TCQ9 1506 aa25.37■■□□□ 1.65
TRA2A-212ENST00000621813 PTPN23Q9H3S7 1636 aa25.34■■□□□ 1.65
TRA2A-212ENST00000621813 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
TRA2A-212ENST00000621813 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
TRA2A-212ENST00000621813 TCOF1Q13428 1488 aaKnown RBP25.29■■□□□ 1.64
TRA2A-212ENST00000621813 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
TRA2A-212ENST00000621813 HFM1A2PYH4 1435 aa25.28■■□□□ 1.64
TRA2A-212ENST00000621813 CDK13Q14004 1512 aaKnown RBP25.27■■□□□ 1.64
TRA2A-212ENST00000621813 NUP160Q12769 1436 aa25.25■■□□□ 1.63
TRA2A-212ENST00000621813 MIA2Q96PC5 1412 aa25.25■■□□□ 1.63
TRA2A-212ENST00000621813 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
TRA2A-212ENST00000621813 PTPRKQ15262 1439 aa25.2■■□□□ 1.63
TRA2A-212ENST00000621813 CARMIL2Q6F5E8 1435 aa25.19■■□□□ 1.62
TRA2A-212ENST00000621813 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
TRA2A-212ENST00000621813 GCC2Q8IWJ2 1684 aa25.16■■□□□ 1.62
TRA2A-212ENST00000621813 AKNAQ7Z591 1439 aa25.16■■□□□ 1.62
TRA2A-212ENST00000621813 NAIPQ13075 1403 aa25.16■■□□□ 1.62
TRA2A-212ENST00000621813 UACAQ9BZF9 1416 aa25.16■■□□□ 1.62
TRA2A-212ENST00000621813 CDK11AQ9UQ88 783 aaPredicted RBP25.14■■□□□ 1.62
TRA2A-212ENST00000621813 FBLN2P98095 1184 aa25.11■■□□□ 1.61
TRA2A-212ENST00000621813 JPH4Q96JJ6 628 aa25.08■■□□□ 1.61
TRA2A-212ENST00000621813 TSHZ2Q9NRE2 1034 aa25.07■■□□□ 1.6
TRA2A-212ENST00000621813 ADCY10Q96PN6 1610 aa25.06■■□□□ 1.6
TRA2A-212ENST00000621813 ITSN2Q9NZM3 1697 aa25.05■■□□□ 1.6
TRA2A-212ENST00000621813 TROQ12816 1431 aaPredicted RBP25.04■■□□□ 1.6
TRA2A-212ENST00000621813 PLB1Q6P1J6 1458 aa25.03■■□□□ 1.6
TRA2A-212ENST00000621813 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
TRA2A-212ENST00000621813 ARID3CA6NKF2 412 aa25.01■■□□□ 1.59
TRA2A-212ENST00000621813 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
TRA2A-212ENST00000621813 ABCA8O94911 1581 aa25■■□□□ 1.59
TRA2A-212ENST00000621813 MIER1Q8N108 512 aa24.99■■□□□ 1.59
TRA2A-212ENST00000621813 ROCK1Q13464 1354 aa24.98■■□□□ 1.59
TRA2A-212ENST00000621813 DAPK1P53355 1430 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms