RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 JPH4Q96JJ6 628 aa30.69■■■□□ 2.5
CIRBP-245ENST00000621399 RIMBP3CA6NJZ7 1639 aa30.67■■■□□ 2.5
CIRBP-245ENST00000621399 RIMBP3BA6NNM3 1639 aa30.67■■■□□ 2.5
CIRBP-245ENST00000621399 RIMBP3Q9UFD9 1639 aa30.67■■■□□ 2.5
CIRBP-245ENST00000621399 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
CIRBP-245ENST00000621399 PRG4Q92954 1404 aaPredicted RBP30.58■■■□□ 2.49
CIRBP-245ENST00000621399 IQGAP2Q13576 1575 aa30.56■■■□□ 2.48
CIRBP-245ENST00000621399 KIF21BO75037 1637 aa30.55■■■□□ 2.48
CIRBP-245ENST00000621399 EHMT2Q96KQ7 1210 aa30.54■■■□□ 2.48
CIRBP-245ENST00000621399 CYB5RLQ6IPT4 315 aa30.52■■■□□ 2.48
CIRBP-245ENST00000621399 ERCC6L2Q5T890 1561 aa30.52■■■□□ 2.48
CIRBP-245ENST00000621399 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
CIRBP-245ENST00000621399 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
CIRBP-245ENST00000621399 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
CIRBP-245ENST00000621399 UBTFP17480 764 aaKnown RBP30.45■■■□□ 2.47
CIRBP-245ENST00000621399 CARMIL2Q6F5E8 1435 aa30.41■■■□□ 2.46
CIRBP-245ENST00000621399 UGGT2Q9NYU1 1516 aa30.4■■■□□ 2.46
CIRBP-245ENST00000621399 DISP1Q96F81 1524 aa30.34■■■□□ 2.45
CIRBP-245ENST00000621399 RANGAP1P46060 587 aaPredicted RBP30.32■■■□□ 2.44
CIRBP-245ENST00000621399 TTBK1Q5TCY1 1321 aaPredicted RBP30.3■■■□□ 2.44
CIRBP-245ENST00000621399 TNIKQ9UKE5 1360 aa30.29■■■□□ 2.44
CIRBP-245ENST00000621399 PTPRGP23470 1445 aa30.27■■■□□ 2.44
CIRBP-245ENST00000621399 KIAA0556O60303 1618 aa30.25■■■□□ 2.43
CIRBP-245ENST00000621399 P3H3Q8IVL6 736 aa30.22■■■□□ 2.43
CIRBP-245ENST00000621399 SAMD9Q5K651 1589 aa30.13■■■□□ 2.41
CIRBP-245ENST00000621399 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
CIRBP-245ENST00000621399 EFCAB5A4FU69 1503 aa30.07■■■□□ 2.4
CIRBP-245ENST00000621399 UACAQ9BZF9 1416 aa30.05■■■□□ 2.4
CIRBP-245ENST00000621399 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
CIRBP-245ENST00000621399 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
CIRBP-245ENST00000621399 ADCY10Q96PN6 1610 aa30.01■■■□□ 2.39
CIRBP-245ENST00000621399 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
CIRBP-245ENST00000621399 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
CIRBP-245ENST00000621399 PLB1Q6P1J6 1458 aa29.98■■■□□ 2.39
CIRBP-245ENST00000621399 ABCC2Q92887 1545 aa29.95■■■□□ 2.38
CIRBP-245ENST00000621399 CLIP1P30622 1438 aa29.94■■■□□ 2.38
CIRBP-245ENST00000621399 TRHP20396 242 aaPredicted RBP29.92■■■□□ 2.38
CIRBP-245ENST00000621399 ABCA8O94911 1581 aa29.91■■■□□ 2.38
CIRBP-245ENST00000621399 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
CIRBP-245ENST00000621399 FMN1Q68DA7 1419 aa29.84■■■□□ 2.37
CIRBP-245ENST00000621399 KDM5BQ9UGL1 1544 aa29.82■■■□□ 2.36
CIRBP-245ENST00000621399 ARID3CA6NKF2 412 aa29.81■■■□□ 2.36
CIRBP-245ENST00000621399 RAPGEF6Q8TEU7 1601 aa29.8■■■□□ 2.36
CIRBP-245ENST00000621399 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
CIRBP-245ENST00000621399 ATP1B4Q9UN42 357 aaPredicted RBP29.76■■■□□ 2.35
CIRBP-245ENST00000621399 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
CIRBP-245ENST00000621399 NUP153P49790 1475 aaKnown RBP29.73■■■□□ 2.35
CIRBP-245ENST00000621399 ASXL2Q76L83 1435 aa29.72■■■□□ 2.35
CIRBP-245ENST00000621399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.72■■■□□ 2.35
CIRBP-245ENST00000621399 HNRNPUL2Q1KMD3 747 aaKnown RBP29.72■■■□□ 2.35
CIRBP-245ENST00000621399 ATP10BO94823 1461 aa29.72■■■□□ 2.35
CIRBP-245ENST00000621399 FAM69CQ0P6D2 419 aa29.64■■■□□ 2.34
CIRBP-245ENST00000621399 CASKIN1Q8WXD9 1431 aa29.63■■■□□ 2.33
CIRBP-245ENST00000621399 ABCC10Q5T3U5 1492 aa29.63■■■□□ 2.33
CIRBP-245ENST00000621399 HECW1Q76N89 1606 aa29.62■■■□□ 2.33
CIRBP-245ENST00000621399 WDR7Q9Y4E6 1490 aa29.6■■■□□ 2.33
CIRBP-245ENST00000621399 PCF11O94913 1555 aaKnown RBP29.58■■■□□ 2.33
CIRBP-245ENST00000621399 KCNH8Q96L42 1107 aa29.57■■■□□ 2.32
CIRBP-245ENST00000621399 EPRSP07814 1512 aaKnown RBP29.56■■■□□ 2.32
CIRBP-245ENST00000621399 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
CIRBP-245ENST00000621399 PLEKHD1A6NEE1 506 aa29.55■■■□□ 2.32
CIRBP-245ENST00000621399 DIP2BQ9P265 1576 aa29.55■■■□□ 2.32
CIRBP-245ENST00000621399 CDK13Q14004 1512 aaKnown RBP29.55■■■□□ 2.32
CIRBP-245ENST00000621399 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
CIRBP-245ENST00000621399 KIF13AQ9H1H9 1805 aa29.48■■■□□ 2.31
CIRBP-245ENST00000621399 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
CIRBP-245ENST00000621399 CCDC18Q5T9S5 1454 aa29.47■■■□□ 2.31
CIRBP-245ENST00000621399 GLI2P10070 1586 aa29.45■■■□□ 2.31
CIRBP-245ENST00000621399 LRRIQ1Q96JM4 1722 aa29.4■■■□□ 2.3
CIRBP-245ENST00000621399 TROQ12816 1431 aaPredicted RBP29.34■■■□□ 2.29
CIRBP-245ENST00000621399 CD109Q6YHK3 1445 aa29.33■■■□□ 2.29
CIRBP-245ENST00000621399 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
CIRBP-245ENST00000621399 TSPOAP1O95153 1857 aa29.27■■■□□ 2.28
CIRBP-245ENST00000621399 ABCA9Q8IUA7 1624 aa29.27■■■□□ 2.28
CIRBP-245ENST00000621399 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.27
CIRBP-245ENST00000621399 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
CIRBP-245ENST00000621399 MTUS2Q5JR59 1369 aa29.25■■■□□ 2.27
CIRBP-245ENST00000621399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.24■■■□□ 2.27
CIRBP-245ENST00000621399 APLP2Q06481 763 aa29.23■■■□□ 2.27
CIRBP-245ENST00000621399 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
CIRBP-245ENST00000621399 TEX14Q8IWB6 1497 aa29.22■■■□□ 2.27
CIRBP-245ENST00000621399 KIF14Q15058 1648 aa29.21■■■□□ 2.27
CIRBP-245ENST00000621399 TIAM1Q13009 1591 aa29.19■■■□□ 2.26
CIRBP-245ENST00000621399 PPRC1Q5VV67 1664 aaKnown RBP29.18■■■□□ 2.26
CIRBP-245ENST00000621399 TTC37Q6PGP7 1564 aa29.18■■■□□ 2.26
CIRBP-245ENST00000621399 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
CIRBP-245ENST00000621399 EHBP1L1Q8N3D4 1523 aa29.13■■■□□ 2.25
CIRBP-245ENST00000621399 PLCH2O75038 1416 aa29.11■■■□□ 2.25
CIRBP-245ENST00000621399 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
CIRBP-245ENST00000621399 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
CIRBP-245ENST00000621399 FANCAO15360 1455 aa29.04■■■□□ 2.24
CIRBP-245ENST00000621399 NEO1Q92859 1461 aa29.04■■■□□ 2.24
CIRBP-245ENST00000621399 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
CIRBP-245ENST00000621399 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
CIRBP-245ENST00000621399 CCNB3Q8WWL7 1395 aa29.03■■■□□ 2.24
CIRBP-245ENST00000621399 KDM6BO15054 1643 aa29.03■■■□□ 2.24
CIRBP-245ENST00000621399 MYO5CQ9NQX4 1742 aa29.02■■■□□ 2.24
CIRBP-245ENST00000621399 ARHGAP5Q13017 1502 aa28.99■■■□□ 2.23
CIRBP-245ENST00000621399 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
CIRBP-245ENST00000621399 COL17A1Q9UMD9 1497 aaPredicted RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms