RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
CIRBP-245ENST00000621399 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
CIRBP-245ENST00000621399 ABCC9O60706 1549 aa38.32■■■■□ 3.72
CIRBP-245ENST00000621399 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
CIRBP-245ENST00000621399 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.52
CIRBP-245ENST00000621399 NACADO15069 1562 aa36.95■■■■□ 3.51
CIRBP-245ENST00000621399 RB1CC1Q8TDY2 1594 aa36.93■■■■□ 3.5
CIRBP-245ENST00000621399 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
CIRBP-245ENST00000621399 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
CIRBP-245ENST00000621399 UNC13AQ9UPW8 1703 aa35.98■■■■□ 3.35
CIRBP-245ENST00000621399 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
CIRBP-245ENST00000621399 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.341e-14■■□□□ 14.3
CIRBP-245ENST00000621399 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
CIRBP-245ENST00000621399 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
CIRBP-245ENST00000621399 SHROOM4Q9ULL8 1493 aa35.42■■■■□ 3.26
CIRBP-245ENST00000621399 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
CIRBP-245ENST00000621399 CECR2Q9BXF3 1484 aa34.62■■■■□ 3.13
CIRBP-245ENST00000621399 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
CIRBP-245ENST00000621399 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
CIRBP-245ENST00000621399 SMARCA4P51532 1647 aa34.4■■■■□ 3.1
CIRBP-245ENST00000621399 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
CIRBP-245ENST00000621399 ATAD2BQ9ULI0 1458 aa34.18■■■■□ 3.06
CIRBP-245ENST00000621399 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
CIRBP-245ENST00000621399 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
CIRBP-245ENST00000621399 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
CIRBP-245ENST00000621399 RSF1Q96T23 1441 aaPredicted RBP34.01■■■■□ 3.03
CIRBP-245ENST00000621399 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
CIRBP-245ENST00000621399 BAZ1BQ9UIG0 1483 aaKnown RBP33.93■■■■□ 3.02
CIRBP-245ENST00000621399 WIZO95785 1651 aa33.89■■■■□ 3.02
CIRBP-245ENST00000621399 TOP2AP11388 1531 aaKnown RBP33.55■■■□□ 2.96
CIRBP-245ENST00000621399 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
CIRBP-245ENST00000621399 NESP48681 1621 aa33.23■■■□□ 2.91
CIRBP-245ENST00000621399 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
CIRBP-245ENST00000621399 CADPSQ9ULU8 1353 aa33.18■■■□□ 2.9
CIRBP-245ENST00000621399 LAMC3Q9Y6N6 1575 aa33.14■■■□□ 2.9
CIRBP-245ENST00000621399 ERCC6Q03468 1493 aa33.02■■■□□ 2.88
CIRBP-245ENST00000621399 CFTRP13569 1480 aa33■■■□□ 2.87
CIRBP-245ENST00000621399 PDS5BQ9NTI5 1447 aa32.98■■■□□ 2.87
CIRBP-245ENST00000621399 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
CIRBP-245ENST00000621399 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
CIRBP-245ENST00000621399 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
CIRBP-245ENST00000621399 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.83
CIRBP-245ENST00000621399 PRDM2Q13029 1718 aa32.63■■■□□ 2.81
CIRBP-245ENST00000621399 MRC2Q9UBG0 1479 aa32.6■■■□□ 2.81
CIRBP-245ENST00000621399 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
CIRBP-245ENST00000621399 CUX2O14529 1486 aa32.52■■■□□ 2.8
CIRBP-245ENST00000621399 WDR62O43379 1518 aa32.44■■■□□ 2.78
CIRBP-245ENST00000621399 URB2Q14146 1524 aaKnown RBP32.41■■■□□ 2.78
CIRBP-245ENST00000621399 ABCC8Q09428 1581 aa32.29■■■□□ 2.76
CIRBP-245ENST00000621399 TOPBP1Q92547 1522 aa32.26■■■□□ 2.76
CIRBP-245ENST00000621399 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
CIRBP-245ENST00000621399 CUX1P39880 1505 aa32.12■■■□□ 2.73
CIRBP-245ENST00000621399 WRNQ14191 1432 aaPredicted RBP eCLIP32.07■■■□□ 2.72
CIRBP-245ENST00000621399 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
CIRBP-245ENST00000621399 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.71
CIRBP-245ENST00000621399 FGD5Q6ZNL6 1462 aa31.99■■■□□ 2.71
CIRBP-245ENST00000621399 SOGA1O94964 1423 aa31.94■■■□□ 2.7
CIRBP-245ENST00000621399 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
CIRBP-245ENST00000621399 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
CIRBP-245ENST00000621399 TOP2BQ02880 1626 aa31.9■■■□□ 2.7
CIRBP-245ENST00000621399 BIVM-ERCC5R4GMW8 1640 aa31.86■■■□□ 2.69
CIRBP-245ENST00000621399 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
CIRBP-245ENST00000621399 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
CIRBP-245ENST00000621399 TDRD9Q8NDG6 1382 aaKnown RBP31.74■■■□□ 2.67
CIRBP-245ENST00000621399 AQRO60306 1485 aaKnown RBP eCLIP31.73■■■□□ 2.672e-18■■■■□ 24
CIRBP-245ENST00000621399 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
CIRBP-245ENST00000621399 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
CIRBP-245ENST00000621399 WDR97A6NE52 1622 aa31.6■■■□□ 2.65
CIRBP-245ENST00000621399 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
CIRBP-245ENST00000621399 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
CIRBP-245ENST00000621399 GRIN2BQ13224 1484 aa31.5■■■□□ 2.63
CIRBP-245ENST00000621399 ABCA5Q8WWZ7 1642 aa31.48■■■□□ 2.63
CIRBP-245ENST00000621399 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
CIRBP-245ENST00000621399 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
CIRBP-245ENST00000621399 FBLN2P98095 1184 aa31.37■■■□□ 2.61
CIRBP-245ENST00000621399 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
CIRBP-245ENST00000621399 PBRM1Q86U86 1689 aa31.37■■■□□ 2.61
CIRBP-245ENST00000621399 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
CIRBP-245ENST00000621399 OSCARQ8IYS5 282 aa31.32■■■□□ 2.6
CIRBP-245ENST00000621399 CHMP7Q8WUX9 453 aaPredicted RBP31.31■■■□□ 2.6
CIRBP-245ENST00000621399 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
CIRBP-245ENST00000621399 SYNJ2O15056 1496 aa31.26■■■□□ 2.59
CIRBP-245ENST00000621399 IGF1RP08069 1367 aa31.23■■■□□ 2.59
CIRBP-245ENST00000621399 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
CIRBP-245ENST00000621399 CHD1O14646 1710 aa31.19■■■□□ 2.58
CIRBP-245ENST00000621399 RUSC2Q8N2Y8 1516 aa31.18■■■□□ 2.58
CIRBP-245ENST00000621399 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
CIRBP-245ENST00000621399 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
CIRBP-245ENST00000621399 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
CIRBP-245ENST00000621399 CUL7Q14999 1698 aa31.04■■■□□ 2.56
CIRBP-245ENST00000621399 FAM9AQ8IZU1 332 aaPredicted RBP30.95■■■□□ 2.55
CIRBP-245ENST00000621399 EEA1Q15075 1411 aa30.95■■■□□ 2.54
CIRBP-245ENST00000621399 CSRNP3Q8WYN3 585 aa30.94■■■□□ 2.54
CIRBP-245ENST00000621399 NUP160Q12769 1436 aa30.92■■■□□ 2.54
CIRBP-245ENST00000621399 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
CIRBP-245ENST00000621399 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
CIRBP-245ENST00000621399 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
CIRBP-245ENST00000621399 PRXQ9BXM0 1461 aa30.82■■■□□ 2.52
CIRBP-245ENST00000621399 KIAA0586Q9BVV6 1533 aa30.73■■■□□ 2.51
CIRBP-245ENST00000621399 ARHGEF11O15085 1522 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms