RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
TARDBP-222ENST00000620505 ERCC6L2Q5T890 1561 aa15.55■□□□□ 0.08
TARDBP-222ENST00000620505 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
TARDBP-222ENST00000620505 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
TARDBP-222ENST00000620505 NUP160Q12769 1436 aa15.51■□□□□ 0.07
TARDBP-222ENST00000620505 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
TARDBP-222ENST00000620505 SHROOM2Q13796 1616 aa15.42■□□□□ 0.06
TARDBP-222ENST00000620505 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
TARDBP-222ENST00000620505 JPH4Q96JJ6 628 aa15.39■□□□□ 0.05
TARDBP-222ENST00000620505 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
TARDBP-222ENST00000620505 IGF1RP08069 1367 aa15.31■□□□□ 0.04
TARDBP-222ENST00000620505 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
TARDBP-222ENST00000620505 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
TARDBP-222ENST00000620505 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
TARDBP-222ENST00000620505 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
TARDBP-222ENST00000620505 CUL7Q14999 1698 aa15.25■□□□□ 0.03
TARDBP-222ENST00000620505 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
TARDBP-222ENST00000620505 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
TARDBP-222ENST00000620505 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
TARDBP-222ENST00000620505 ADCY10Q96PN6 1610 aa15.21■□□□□ 0.02
TARDBP-222ENST00000620505 ABCC10Q5T3U5 1492 aa15.17■□□□□ 0.02
TARDBP-222ENST00000620505 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
TARDBP-222ENST00000620505 PTPRGP23470 1445 aa15.16■□□□□ 0.02
TARDBP-222ENST00000620505 DIP2BQ9P265 1576 aa15.14■□□□□ 0.01
TARDBP-222ENST00000620505 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
TARDBP-222ENST00000620505 CARMIL2Q6F5E8 1435 aa15.11■□□□□ 0.01
TARDBP-222ENST00000620505 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
TARDBP-222ENST00000620505 TSPOAP1O95153 1857 aa15.08■□□□□ 0
TARDBP-222ENST00000620505 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
TARDBP-222ENST00000620505 DISP1Q96F81 1524 aa15.05■□□□□ -0
TARDBP-222ENST00000620505 KDM6BO15054 1643 aa15.04■□□□□ -0
TARDBP-222ENST00000620505 ABCC2Q92887 1545 aa15.04■□□□□ -0
TARDBP-222ENST00000620505 ASXL2Q76L83 1435 aa15.02■□□□□ -0
TARDBP-222ENST00000620505 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
TARDBP-222ENST00000620505 UGGT2Q9NYU1 1516 aa15□□□□□ -0.01
TARDBP-222ENST00000620505 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
TARDBP-222ENST00000620505 PLB1Q6P1J6 1458 aa14.98□□□□□ -0.01
TARDBP-222ENST00000620505 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
TARDBP-222ENST00000620505 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
TARDBP-222ENST00000620505 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
TARDBP-222ENST00000620505 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
TARDBP-222ENST00000620505 GLI2P10070 1586 aa14.94□□□□□ -0.02
TARDBP-222ENST00000620505 KDM5BQ9UGL1 1544 aa14.93□□□□□ -0.02
TARDBP-222ENST00000620505 ZCCHC11Q5TAX3 1644 aaKnown RBP14.93□□□□□ -0.02
TARDBP-222ENST00000620505 PPRC1Q5VV67 1664 aaKnown RBP14.93□□□□□ -0.02
TARDBP-222ENST00000620505 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
TARDBP-222ENST00000620505 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
TARDBP-222ENST00000620505 P3H3Q8IVL6 736 aa14.88□□□□□ -0.03
TARDBP-222ENST00000620505 PRXQ9BXM0 1461 aa14.88□□□□□ -0.03
TARDBP-222ENST00000620505 COL17A1Q9UMD9 1497 aaPredicted RBP14.88□□□□□ -0.03
TARDBP-222ENST00000620505 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
TARDBP-222ENST00000620505 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
TARDBP-222ENST00000620505 MAP3K4Q9Y6R4 1608 aa14.87□□□□□ -0.03
TARDBP-222ENST00000620505 GOLGA3Q08378 1498 aa14.87□□□□□ -0.03
TARDBP-222ENST00000620505 WDR7Q9Y4E6 1490 aa14.85□□□□□ -0.03
TARDBP-222ENST00000620505 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-222ENST00000620505 ABCA8O94911 1581 aa14.84□□□□□ -0.03
TARDBP-222ENST00000620505 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
TARDBP-222ENST00000620505 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
TARDBP-222ENST00000620505 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
TARDBP-222ENST00000620505 ADGRL1O94910 1474 aa14.8□□□□□ -0.04
TARDBP-222ENST00000620505 CD109Q6YHK3 1445 aa14.79□□□□□ -0.04
TARDBP-222ENST00000620505 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-222ENST00000620505 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
TARDBP-222ENST00000620505 ATP10BO94823 1461 aa14.74□□□□□ -0.05
TARDBP-222ENST00000620505 MAGI3Q5TCQ9 1506 aa14.73□□□□□ -0.05
TARDBP-222ENST00000620505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
TARDBP-222ENST00000620505 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
TARDBP-222ENST00000620505 SAMD9Q5K651 1589 aa14.7□□□□□ -0.06
TARDBP-222ENST00000620505 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
TARDBP-222ENST00000620505 FHOD3Q2V2M9 1422 aa14.68□□□□□ -0.06
TARDBP-222ENST00000620505 RAPGEF6Q8TEU7 1601 aa14.68□□□□□ -0.06
TARDBP-222ENST00000620505 EEA1Q15075 1411 aa14.66□□□□□ -0.06
TARDBP-222ENST00000620505 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
TARDBP-222ENST00000620505 KIF21BO75037 1637 aa14.64□□□□□ -0.07
TARDBP-222ENST00000620505 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
TARDBP-222ENST00000620505 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
TARDBP-222ENST00000620505 RAPGEF3O95398 923 aa14.62□□□□□ -0.07
TARDBP-222ENST00000620505 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
TARDBP-222ENST00000620505 HECW2Q9P2P5 1572 aa14.6□□□□□ -0.07
TARDBP-222ENST00000620505 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
TARDBP-222ENST00000620505 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
TARDBP-222ENST00000620505 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
TARDBP-222ENST00000620505 NEO1Q92859 1461 aa14.56□□□□□ -0.08
TARDBP-222ENST00000620505 ILDR1Q86SU0 546 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-222ENST00000620505 PHLDB1Q86UU1 1377 aa14.55□□□□□ -0.08
TARDBP-222ENST00000620505 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
TARDBP-222ENST00000620505 ARID4BQ4LE39 1312 aaPredicted RBP14.53□□□□□ -0.08
TARDBP-222ENST00000620505 FRMPD1Q5SYB0 1578 aa14.52□□□□□ -0.08
TARDBP-222ENST00000620505 CDK13Q14004 1512 aaKnown RBP14.52□□□□□ -0.08
TARDBP-222ENST00000620505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
TARDBP-222ENST00000620505 FANCAO15360 1455 aa14.5□□□□□ -0.09
TARDBP-222ENST00000620505 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
TARDBP-222ENST00000620505 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
TARDBP-222ENST00000620505 DENND4BO75064 1496 aaPredicted RBP14.49□□□□□ -0.09
TARDBP-222ENST00000620505 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
TARDBP-222ENST00000620505 PTPRMP28827 1452 aa14.47□□□□□ -0.09
TARDBP-222ENST00000620505 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
TARDBP-222ENST00000620505 RICTORQ6R327 1708 aa14.45□□□□□ -0.1
TARDBP-222ENST00000620505 MADDQ8WXG6 1647 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms