RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 IGF1RP08069 1367 aa36.38■■■■□ 3.41
PMPCA-210ENST00000620412 RUSC2Q8N2Y8 1516 aa36.23■■■■□ 3.39
PMPCA-210ENST00000620412 KIAA0586Q9BVV6 1533 aa36.15■■■■□ 3.38
PMPCA-210ENST00000620412 CARMIL1Q5VZK9 1371 aa36.13■■■■□ 3.37
PMPCA-210ENST00000620412 NPM1P06748 294 aaKnown RBP eCLIP36.07■■■■□ 3.36
PMPCA-210ENST00000620412 EEA1Q15075 1411 aa36.03■■■■□ 3.36
PMPCA-210ENST00000620412 CHIC1Q5VXU3 224 aa35.98■■■■□ 3.35
PMPCA-210ENST00000620412 TTBK1Q5TCY1 1321 aaPredicted RBP35.97■■■■□ 3.35
PMPCA-210ENST00000620412 RAPGEF2Q9Y4G8 1499 aa35.96■■■■□ 3.35
PMPCA-210ENST00000620412 FAM69CQ0P6D2 419 aa35.94■■■■□ 3.34
PMPCA-210ENST00000620412 PRXQ9BXM0 1461 aa35.91■■■■□ 3.34
PMPCA-210ENST00000620412 PTPRGP23470 1445 aa35.89■■■■□ 3.34
PMPCA-210ENST00000620412 ADCY10Q96PN6 1610 aa35.87■■■■□ 3.33
PMPCA-210ENST00000620412 AEBP2Q6ZN18 517 aaPredicted RBP35.84■■■■□ 3.33
PMPCA-210ENST00000620412 ABCC10Q5T3U5 1492 aa35.84■■■■□ 3.33
PMPCA-210ENST00000620412 CARMIL2Q6F5E8 1435 aa35.83■■■■□ 3.33
PMPCA-210ENST00000620412 KIF13AQ9H1H9 1805 aa35.81■■■■□ 3.32
PMPCA-210ENST00000620412 MAPKBP1O60336 1514 aa35.8■■■■□ 3.32
PMPCA-210ENST00000620412 TNIKQ9UKE5 1360 aa35.79■■■■□ 3.32
PMPCA-210ENST00000620412 IQGAP2Q13576 1575 aa35.76■■■■□ 3.31
PMPCA-210ENST00000620412 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
PMPCA-210ENST00000620412 CSRNP3Q8WYN3 585 aa35.72■■■■□ 3.31
PMPCA-210ENST00000620412 DIP2BQ9P265 1576 aa35.68■■■■□ 3.3
PMPCA-210ENST00000620412 KIF21BO75037 1637 aa35.66■■■■□ 3.3
PMPCA-210ENST00000620412 DISP1Q96F81 1524 aa35.63■■■■□ 3.29
PMPCA-210ENST00000620412 ABCC2Q92887 1545 aa35.59■■■■□ 3.29
PMPCA-210ENST00000620412 UGGT2Q9NYU1 1516 aa35.59■■■■□ 3.29
PMPCA-210ENST00000620412 UACAQ9BZF9 1416 aa35.57■■■■□ 3.29
PMPCA-210ENST00000620412 UHRF1BP1LA0JNW5 1464 aa35.52■■■■□ 3.28
PMPCA-210ENST00000620412 ASXL2Q76L83 1435 aa35.51■■■■□ 3.28
PMPCA-210ENST00000620412 PLB1Q6P1J6 1458 aa35.46■■■■□ 3.27
PMPCA-210ENST00000620412 KIAA0556O60303 1618 aa35.43■■■■□ 3.26
PMPCA-210ENST00000620412 TSPOAP1O95153 1857 aa35.4■■■■□ 3.26
PMPCA-210ENST00000620412 GOLGA3Q08378 1498 aa35.37■■■■□ 3.25
PMPCA-210ENST00000620412 KDM6BO15054 1643 aa35.36■■■■□ 3.25
PMPCA-210ENST00000620412 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
PMPCA-210ENST00000620412 KDM5BQ9UGL1 1544 aa35.36■■■■□ 3.25
PMPCA-210ENST00000620412 GLI2P10070 1586 aa35.3■■■■□ 3.24
PMPCA-210ENST00000620412 SAMD9Q5K651 1589 aa35.29■■■■□ 3.24
PMPCA-210ENST00000620412 EPRSP07814 1512 aaKnown RBP35.27■■■■□ 3.24
PMPCA-210ENST00000620412 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
PMPCA-210ENST00000620412 P3H3Q8IVL6 736 aa35.21■■■■□ 3.23
PMPCA-210ENST00000620412 EFCAB5A4FU69 1503 aa35.16■■■■□ 3.22
PMPCA-210ENST00000620412 PPRC1Q5VV67 1664 aaKnown RBP35.15■■■■□ 3.22
PMPCA-210ENST00000620412 KDM4FA0A1W2PPD8 638 aa35.15■■■■□ 3.22
PMPCA-210ENST00000620412 KCNH8Q96L42 1107 aa35.14■■■■□ 3.22
PMPCA-210ENST00000620412 WDR7Q9Y4E6 1490 aa35.14■■■■□ 3.22
PMPCA-210ENST00000620412 ABCA8O94911 1581 aa35.11■■■■□ 3.21
PMPCA-210ENST00000620412 ARID3CA6NKF2 412 aa35.09■■■■□ 3.21
PMPCA-210ENST00000620412 COL17A1Q9UMD9 1497 aaPredicted RBP35.08■■■■□ 3.21
PMPCA-210ENST00000620412 MAP3K4Q9Y6R4 1608 aa35.06■■■■□ 3.2
PMPCA-210ENST00000620412 TEX14Q8IWB6 1497 aa35.05■■■■□ 3.2
PMPCA-210ENST00000620412 RANGAP1P46060 587 aaPredicted RBP35.02■■■■□ 3.2
PMPCA-210ENST00000620412 CD109Q6YHK3 1445 aa34.98■■■■□ 3.19
PMPCA-210ENST00000620412 UBTFP17480 764 aaKnown RBP34.97■■■■□ 3.19
PMPCA-210ENST00000620412 ATP10BO94823 1461 aa34.91■■■■□ 3.18
PMPCA-210ENST00000620412 MAGI3Q5TCQ9 1506 aa34.86■■■■□ 3.17
PMPCA-210ENST00000620412 RAPGEF6Q8TEU7 1601 aa34.86■■■■□ 3.17
PMPCA-210ENST00000620412 ARHGAP35Q9NRY4 1499 aa34.85■■■■□ 3.17
PMPCA-210ENST00000620412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.85■■■■□ 3.17
PMPCA-210ENST00000620412 HNRNPUL2Q1KMD3 747 aaKnown RBP34.85■■■■□ 3.17
PMPCA-210ENST00000620412 FHOD3Q2V2M9 1422 aa34.85■■■■□ 3.17
PMPCA-210ENST00000620412 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
PMPCA-210ENST00000620412 ADGRL1O94910 1474 aa34.79■■■■□ 3.16
PMPCA-210ENST00000620412 EHMT2Q96KQ7 1210 aa34.76■■■■□ 3.16
PMPCA-210ENST00000620412 FMN1Q68DA7 1419 aa34.74■■■■□ 3.15
PMPCA-210ENST00000620412 NUP153P49790 1475 aaKnown RBP34.68■■■■□ 3.14
PMPCA-210ENST00000620412 CLIP1P30622 1438 aa34.64■■■■□ 3.14
PMPCA-210ENST00000620412 HECW1Q76N89 1606 aa34.62■■■■□ 3.13
PMPCA-210ENST00000620412 PLEKHD1A6NEE1 506 aa34.6■■■■□ 3.13
PMPCA-210ENST00000620412 ARAP3Q8WWN8 1544 aa34.59■■■■□ 3.13
PMPCA-210ENST00000620412 ABCA9Q8IUA7 1624 aa34.59■■■■□ 3.13
PMPCA-210ENST00000620412 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
PMPCA-210ENST00000620412 RAPGEF3O95398 923 aa34.55■■■■□ 3.12
PMPCA-210ENST00000620412 CEP162Q5TB80 1403 aa34.52■■■■□ 3.12
PMPCA-210ENST00000620412 NEO1Q92859 1461 aa34.47■■■■□ 3.11
PMPCA-210ENST00000620412 PCF11O94913 1555 aaKnown RBP34.47■■■■□ 3.11
PMPCA-210ENST00000620412 CASKIN1Q8WXD9 1431 aa34.47■■■■□ 3.11
PMPCA-210ENST00000620412 ATP1B4Q9UN42 357 aaPredicted RBP34.46■■■■□ 3.11
PMPCA-210ENST00000620412 FYCO1Q9BQS8 1478 aa34.45■■■■□ 3.1
PMPCA-210ENST00000620412 LRRIQ1Q96JM4 1722 aa34.42■■■■□ 3.1
PMPCA-210ENST00000620412 CCDC18Q5T9S5 1454 aa34.39■■■■□ 3.1
PMPCA-210ENST00000620412 CDK13Q14004 1512 aaKnown RBP34.37■■■■□ 3.09
PMPCA-210ENST00000620412 LOC105371045A0A1W2PR82 267 aa34.33■■■■□ 3.09
PMPCA-210ENST00000620412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
PMPCA-210ENST00000620412 AKNAQ7Z591 1439 aa34.31■■■■□ 3.08
PMPCA-210ENST00000620412 ARID4BQ4LE39 1312 aaPredicted RBP34.3■■■■□ 3.08
PMPCA-210ENST00000620412 FANCAO15360 1455 aa34.29■■■■□ 3.08
PMPCA-210ENST00000620412 DENND4BO75064 1496 aaPredicted RBP34.28■■■■□ 3.08
PMPCA-210ENST00000620412 FRMPD1Q5SYB0 1578 aa34.27■■■■□ 3.08
PMPCA-210ENST00000620412 TTC37Q6PGP7 1564 aa34.24■■■■□ 3.07
PMPCA-210ENST00000620412 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
PMPCA-210ENST00000620412 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
PMPCA-210ENST00000620412 TROQ12816 1431 aaPredicted RBP34.17■■■■□ 3.06
PMPCA-210ENST00000620412 KIF14Q15058 1648 aa34.16■■■■□ 3.06
PMPCA-210ENST00000620412 PLCH2O75038 1416 aa34.16■■■■□ 3.06
PMPCA-210ENST00000620412 VPS8Q8N3P4 1428 aa34.16■■■■□ 3.06
PMPCA-210ENST00000620412 CFAP74Q9C0B2 1584 aa34.13■■■■□ 3.05
PMPCA-210ENST00000620412 PTPRMP28827 1452 aa34.13■■■■□ 3.05
PMPCA-210ENST00000620412 EFCAB2Q5VUJ9 269 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms