RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 ABCC10Q5T3U5 1492 aa11.92□□□□□ -0.5
PSMB3-212ENST00000620309 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
PSMB3-212ENST00000620309 DIP2BQ9P265 1576 aa11.91□□□□□ -0.5
PSMB3-212ENST00000620309 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
PSMB3-212ENST00000620309 EEA1Q15075 1411 aa11.89□□□□□ -0.51
PSMB3-212ENST00000620309 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
PSMB3-212ENST00000620309 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
PSMB3-212ENST00000620309 KDM6BO15054 1643 aa11.88□□□□□ -0.51
PSMB3-212ENST00000620309 KIF21BO75037 1637 aa11.87□□□□□ -0.51
PSMB3-212ENST00000620309 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
PSMB3-212ENST00000620309 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
PSMB3-212ENST00000620309 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
PSMB3-212ENST00000620309 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
PSMB3-212ENST00000620309 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
PSMB3-212ENST00000620309 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
PSMB3-212ENST00000620309 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
PSMB3-212ENST00000620309 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
PSMB3-212ENST00000620309 PPRC1Q5VV67 1664 aaKnown RBP11.77□□□□□ -0.53
PSMB3-212ENST00000620309 IGF1RP08069 1367 aa11.76□□□□□ -0.53
PSMB3-212ENST00000620309 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
PSMB3-212ENST00000620309 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
PSMB3-212ENST00000620309 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
PSMB3-212ENST00000620309 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
PSMB3-212ENST00000620309 CARMIL1Q5VZK9 1371 aa11.69□□□□□ -0.54
PSMB3-212ENST00000620309 GLI2P10070 1586 aa11.68□□□□□ -0.54
PSMB3-212ENST00000620309 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
PSMB3-212ENST00000620309 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
PSMB3-212ENST00000620309 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
PSMB3-212ENST00000620309 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
PSMB3-212ENST00000620309 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
PSMB3-212ENST00000620309 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
PSMB3-212ENST00000620309 FBXO41Q8TF61 875 aa11.63□□□□□ -0.55
PSMB3-212ENST00000620309 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
PSMB3-212ENST00000620309 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
PSMB3-212ENST00000620309 ABCC2Q92887 1545 aa11.59□□□□□ -0.55
PSMB3-212ENST00000620309 UGGT2Q9NYU1 1516 aa11.59□□□□□ -0.55
PSMB3-212ENST00000620309 EFCAB5A4FU69 1503 aa11.58□□□□□ -0.56
PSMB3-212ENST00000620309 CARMIL2Q6F5E8 1435 aa11.58□□□□□ -0.56
PSMB3-212ENST00000620309 ASXL2Q76L83 1435 aa11.58□□□□□ -0.56
PSMB3-212ENST00000620309 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
PSMB3-212ENST00000620309 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
PSMB3-212ENST00000620309 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
PSMB3-212ENST00000620309 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
PSMB3-212ENST00000620309 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
PSMB3-212ENST00000620309 PTPRGP23470 1445 aa11.52□□□□□ -0.57
PSMB3-212ENST00000620309 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
PSMB3-212ENST00000620309 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
PSMB3-212ENST00000620309 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
PSMB3-212ENST00000620309 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
PSMB3-212ENST00000620309 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
PSMB3-212ENST00000620309 CLIP1P30622 1438 aa11.47□□□□□ -0.57
PSMB3-212ENST00000620309 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.57
PSMB3-212ENST00000620309 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
PSMB3-212ENST00000620309 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.57
PSMB3-212ENST00000620309 LRRIQ1Q96JM4 1722 aa11.46□□□□□ -0.58
PSMB3-212ENST00000620309 LMTK3Q96Q04 1460 aa11.45□□□□□ -0.58
PSMB3-212ENST00000620309 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
PSMB3-212ENST00000620309 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
PSMB3-212ENST00000620309 UACAQ9BZF9 1416 aa11.44□□□□□ -0.58
PSMB3-212ENST00000620309 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
PSMB3-212ENST00000620309 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
PSMB3-212ENST00000620309 CFAP43Q8NDM7 1665 aa11.42□□□□□ -0.58
PSMB3-212ENST00000620309 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
PSMB3-212ENST00000620309 RAPGEF6Q8TEU7 1601 aa11.41□□□□□ -0.58
PSMB3-212ENST00000620309 PTPRMP28827 1452 aa11.4□□□□□ -0.58
PSMB3-212ENST00000620309 ABCA8O94911 1581 aa11.4□□□□□ -0.58
PSMB3-212ENST00000620309 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
PSMB3-212ENST00000620309 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
PSMB3-212ENST00000620309 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
PSMB3-212ENST00000620309 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
PSMB3-212ENST00000620309 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
PSMB3-212ENST00000620309 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
PSMB3-212ENST00000620309 SOCS7O14512 581 aa11.36□□□□□ -0.59
PSMB3-212ENST00000620309 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
PSMB3-212ENST00000620309 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
PSMB3-212ENST00000620309 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
PSMB3-212ENST00000620309 CD109Q6YHK3 1445 aa11.33□□□□□ -0.6
PSMB3-212ENST00000620309 MADDQ8WXG6 1647 aa11.32□□□□□ -0.6
PSMB3-212ENST00000620309 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
PSMB3-212ENST00000620309 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
PSMB3-212ENST00000620309 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
PSMB3-212ENST00000620309 TIAM1Q13009 1591 aa11.31□□□□□ -0.6
PSMB3-212ENST00000620309 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
PSMB3-212ENST00000620309 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
PSMB3-212ENST00000620309 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
PSMB3-212ENST00000620309 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
PSMB3-212ENST00000620309 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.61
PSMB3-212ENST00000620309 CERKQ8TCT0 537 aa11.26□□□□□ -0.61
PSMB3-212ENST00000620309 RIMS1Q86UR5 1692 aaKnown RBP11.25□□□□□ -0.61
PSMB3-212ENST00000620309 DISP3Q9P2K9 1392 aa11.25□□□□□ -0.61
PSMB3-212ENST00000620309 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
PSMB3-212ENST00000620309 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
PSMB3-212ENST00000620309 SPATA31D1Q6ZQQ2 1576 aa11.24□□□□□ -0.61
PSMB3-212ENST00000620309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
PSMB3-212ENST00000620309 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
PSMB3-212ENST00000620309 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
PSMB3-212ENST00000620309 CFAP74Q9C0B2 1584 aa11.22□□□□□ -0.61
PSMB3-212ENST00000620309 ARHGEF40Q8TER5 1519 aa11.21□□□□□ -0.61
PSMB3-212ENST00000620309 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.62
PSMB3-212ENST00000620309 KIF14Q15058 1648 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms