RNA–Protein interactions for RNA: ENST00000620167.1

LINC01554-203, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-203ENST00000620167 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
LINC01554-203ENST00000620167 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
LINC01554-203ENST00000620167 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
LINC01554-203ENST00000620167 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
LINC01554-203ENST00000620167 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
LINC01554-203ENST00000620167 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
LINC01554-203ENST00000620167 CLIP1P30622 1438 aa23.63■■□□□ 1.37
LINC01554-203ENST00000620167 DNAJC5Q9H3Z4 198 aa23.62■■□□□ 1.37
LINC01554-203ENST00000620167 EFCAB5A4FU69 1503 aa23.56■■□□□ 1.36
LINC01554-203ENST00000620167 CLASP1Q7Z460 1538 aa23.56■■□□□ 1.36
LINC01554-203ENST00000620167 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
LINC01554-203ENST00000620167 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.36
LINC01554-203ENST00000620167 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
LINC01554-203ENST00000620167 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
LINC01554-203ENST00000620167 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
LINC01554-203ENST00000620167 SHROOM2Q13796 1616 aa23.45■■□□□ 1.35
LINC01554-203ENST00000620167 CARMIL2Q6F5E8 1435 aa23.44■■□□□ 1.34
LINC01554-203ENST00000620167 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
LINC01554-203ENST00000620167 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
LINC01554-203ENST00000620167 KIAA0556O60303 1618 aa23.39■■□□□ 1.34
LINC01554-203ENST00000620167 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
LINC01554-203ENST00000620167 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
LINC01554-203ENST00000620167 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
LINC01554-203ENST00000620167 VPS8Q8N3P4 1428 aa23.38■■□□□ 1.33
LINC01554-203ENST00000620167 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
LINC01554-203ENST00000620167 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
LINC01554-203ENST00000620167 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
LINC01554-203ENST00000620167 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
LINC01554-203ENST00000620167 FHOD3Q2V2M9 1422 aa23.35■■□□□ 1.33
LINC01554-203ENST00000620167 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
LINC01554-203ENST00000620167 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
LINC01554-203ENST00000620167 PTPRGP23470 1445 aa23.22■■□□□ 1.31
LINC01554-203ENST00000620167 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
LINC01554-203ENST00000620167 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
LINC01554-203ENST00000620167 APLP2Q06481 763 aa23.15■■□□□ 1.3
LINC01554-203ENST00000620167 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
LINC01554-203ENST00000620167 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
LINC01554-203ENST00000620167 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
LINC01554-203ENST00000620167 ABCA8O94911 1581 aa23.11■■□□□ 1.29
LINC01554-203ENST00000620167 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
LINC01554-203ENST00000620167 PLB1Q6P1J6 1458 aa23.09■■□□□ 1.29
LINC01554-203ENST00000620167 UACAQ9BZF9 1416 aa23.08■■□□□ 1.29
LINC01554-203ENST00000620167 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
LINC01554-203ENST00000620167 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
LINC01554-203ENST00000620167 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
LINC01554-203ENST00000620167 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
LINC01554-203ENST00000620167 TIAM1Q13009 1591 aa23.03■■□□□ 1.28
LINC01554-203ENST00000620167 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
LINC01554-203ENST00000620167 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
LINC01554-203ENST00000620167 ABCC2Q92887 1545 aa23.01■■□□□ 1.27
LINC01554-203ENST00000620167 CFAP43Q8NDM7 1665 aa23■■□□□ 1.27
LINC01554-203ENST00000620167 LRRIQ1Q96JM4 1722 aa22.97■■□□□ 1.27
LINC01554-203ENST00000620167 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
LINC01554-203ENST00000620167 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
LINC01554-203ENST00000620167 ATP10BO94823 1461 aa22.92■■□□□ 1.26
LINC01554-203ENST00000620167 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
LINC01554-203ENST00000620167 KDM5BQ9UGL1 1544 aa22.91■■□□□ 1.26
LINC01554-203ENST00000620167 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
LINC01554-203ENST00000620167 ADCY10Q96PN6 1610 aa22.89■■□□□ 1.25
LINC01554-203ENST00000620167 MTUS2Q5JR59 1369 aa22.88■■□□□ 1.25
LINC01554-203ENST00000620167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.87■■□□□ 1.25
LINC01554-203ENST00000620167 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
LINC01554-203ENST00000620167 EHBP1L1Q8N3D4 1523 aa22.86■■□□□ 1.25
LINC01554-203ENST00000620167 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
LINC01554-203ENST00000620167 PLEKHD1A6NEE1 506 aa22.83■■□□□ 1.25
LINC01554-203ENST00000620167 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
LINC01554-203ENST00000620167 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
LINC01554-203ENST00000620167 ZCCHC11Q5TAX3 1644 aaKnown RBP22.81■■□□□ 1.24
LINC01554-203ENST00000620167 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
LINC01554-203ENST00000620167 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC01554-203ENST00000620167 SUPT6HQ7KZ85 1726 aaKnown RBP22.76■■□□□ 1.23
LINC01554-203ENST00000620167 NCOA2Q15596 1464 aa22.72■■□□□ 1.23
LINC01554-203ENST00000620167 MAPKBP1O60336 1514 aa22.7■■□□□ 1.22
LINC01554-203ENST00000620167 WDR7Q9Y4E6 1490 aa22.68■■□□□ 1.22
LINC01554-203ENST00000620167 KIF14Q15058 1648 aa22.68■■□□□ 1.22
LINC01554-203ENST00000620167 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
LINC01554-203ENST00000620167 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
LINC01554-203ENST00000620167 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
LINC01554-203ENST00000620167 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
LINC01554-203ENST00000620167 MYOM3Q5VTT5 1437 aa22.63■■□□□ 1.21
LINC01554-203ENST00000620167 ABCC10Q5T3U5 1492 aa22.62■■□□□ 1.21
LINC01554-203ENST00000620167 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
LINC01554-203ENST00000620167 RRBP1Q9P2E9 1410 aaKnown RBP22.62■■□□□ 1.21
LINC01554-203ENST00000620167 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
LINC01554-203ENST00000620167 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
LINC01554-203ENST00000620167 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.2
LINC01554-203ENST00000620167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
LINC01554-203ENST00000620167 GPATCH8Q9UKJ3 1502 aaKnown RBP22.56■■□□□ 1.2
LINC01554-203ENST00000620167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.56■■□□□ 1.2
LINC01554-203ENST00000620167 ITSN2Q9NZM3 1697 aa22.56■■□□□ 1.2
LINC01554-203ENST00000620167 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
LINC01554-203ENST00000620167 ABCA9Q8IUA7 1624 aa22.52■■□□□ 1.2
LINC01554-203ENST00000620167 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
LINC01554-203ENST00000620167 CDC42BPAQ5VT25 1732 aa22.51■■□□□ 1.19
LINC01554-203ENST00000620167 CFDP1Q9UEE9 299 aaPredicted RBP22.5■■□□□ 1.19
LINC01554-203ENST00000620167 ARAP3Q8WWN8 1544 aa22.49■■□□□ 1.19
LINC01554-203ENST00000620167 PLCH2O75038 1416 aa22.49■■□□□ 1.19
LINC01554-203ENST00000620167 TCOF1Q13428 1488 aaKnown RBP22.48■■□□□ 1.19
LINC01554-203ENST00000620167 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
LINC01554-203ENST00000620167 GLI2P10070 1586 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms