RNA–Protein interactions for RNA: ENST00000620167.1

LINC01554-203, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-203ENST00000620167 NISCHQ9Y2I1 1504 aa34.46■■■■□ 3.11
LINC01554-203ENST00000620167 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
LINC01554-203ENST00000620167 ABCC9O60706 1549 aa29.06■■■□□ 2.24
LINC01554-203ENST00000620167 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
LINC01554-203ENST00000620167 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
LINC01554-203ENST00000620167 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
LINC01554-203ENST00000620167 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
LINC01554-203ENST00000620167 NACADO15069 1562 aa28.35■■■□□ 2.13
LINC01554-203ENST00000620167 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
LINC01554-203ENST00000620167 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
LINC01554-203ENST00000620167 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
LINC01554-203ENST00000620167 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
LINC01554-203ENST00000620167 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
LINC01554-203ENST00000620167 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
LINC01554-203ENST00000620167 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
LINC01554-203ENST00000620167 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
LINC01554-203ENST00000620167 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
LINC01554-203ENST00000620167 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
LINC01554-203ENST00000620167 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
LINC01554-203ENST00000620167 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
LINC01554-203ENST00000620167 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
LINC01554-203ENST00000620167 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
LINC01554-203ENST00000620167 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
LINC01554-203ENST00000620167 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
LINC01554-203ENST00000620167 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
LINC01554-203ENST00000620167 WIZO95785 1651 aa26.26■■□□□ 1.79
LINC01554-203ENST00000620167 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
LINC01554-203ENST00000620167 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
LINC01554-203ENST00000620167 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
LINC01554-203ENST00000620167 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
LINC01554-203ENST00000620167 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
LINC01554-203ENST00000620167 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
LINC01554-203ENST00000620167 CFTRP13569 1480 aa25.43■■□□□ 1.66
LINC01554-203ENST00000620167 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
LINC01554-203ENST00000620167 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
LINC01554-203ENST00000620167 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
LINC01554-203ENST00000620167 NESP48681 1621 aa25.23■■□□□ 1.63
LINC01554-203ENST00000620167 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
LINC01554-203ENST00000620167 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
LINC01554-203ENST00000620167 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
LINC01554-203ENST00000620167 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.6
LINC01554-203ENST00000620167 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
LINC01554-203ENST00000620167 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
LINC01554-203ENST00000620167 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
LINC01554-203ENST00000620167 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
LINC01554-203ENST00000620167 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
LINC01554-203ENST00000620167 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
LINC01554-203ENST00000620167 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
LINC01554-203ENST00000620167 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
LINC01554-203ENST00000620167 CUX1P39880 1505 aa24.84■■□□□ 1.57
LINC01554-203ENST00000620167 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
LINC01554-203ENST00000620167 DNMBPQ6XZF7 1577 aa24.82■■□□□ 1.56
LINC01554-203ENST00000620167 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
LINC01554-203ENST00000620167 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
LINC01554-203ENST00000620167 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
LINC01554-203ENST00000620167 CUX2O14529 1486 aa24.73■■□□□ 1.55
LINC01554-203ENST00000620167 WDR62O43379 1518 aa24.73■■□□□ 1.55
LINC01554-203ENST00000620167 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
LINC01554-203ENST00000620167 POLA1P09884 1462 aaPredicted RBP24.62■■□□□ 1.53
LINC01554-203ENST00000620167 SOGA1O94964 1423 aa24.55■■□□□ 1.52
LINC01554-203ENST00000620167 EEA1Q15075 1411 aa24.51■■□□□ 1.51
LINC01554-203ENST00000620167 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
LINC01554-203ENST00000620167 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
LINC01554-203ENST00000620167 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
LINC01554-203ENST00000620167 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
LINC01554-203ENST00000620167 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
LINC01554-203ENST00000620167 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
LINC01554-203ENST00000620167 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
LINC01554-203ENST00000620167 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.49
LINC01554-203ENST00000620167 FAM9AQ8IZU1 332 aaPredicted RBP24.31■■□□□ 1.48
LINC01554-203ENST00000620167 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
LINC01554-203ENST00000620167 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
LINC01554-203ENST00000620167 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
LINC01554-203ENST00000620167 IGF1RP08069 1367 aa24.24■■□□□ 1.47
LINC01554-203ENST00000620167 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
LINC01554-203ENST00000620167 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
LINC01554-203ENST00000620167 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
LINC01554-203ENST00000620167 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
LINC01554-203ENST00000620167 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
LINC01554-203ENST00000620167 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
LINC01554-203ENST00000620167 CUL7Q14999 1698 aa24.13■■□□□ 1.45
LINC01554-203ENST00000620167 KIF21BO75037 1637 aa24.13■■□□□ 1.45
LINC01554-203ENST00000620167 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
LINC01554-203ENST00000620167 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
LINC01554-203ENST00000620167 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
LINC01554-203ENST00000620167 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
LINC01554-203ENST00000620167 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
LINC01554-203ENST00000620167 FHAD1B1AJZ9 1412 aa24.04■■□□□ 1.44
LINC01554-203ENST00000620167 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
LINC01554-203ENST00000620167 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
LINC01554-203ENST00000620167 ADAMTS12P58397 1594 aa24■■□□□ 1.43
LINC01554-203ENST00000620167 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
LINC01554-203ENST00000620167 TNIKQ9UKE5 1360 aa23.92■■□□□ 1.42
LINC01554-203ENST00000620167 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
LINC01554-203ENST00000620167 CHD1O14646 1710 aa23.89■■□□□ 1.42
LINC01554-203ENST00000620167 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
LINC01554-203ENST00000620167 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
LINC01554-203ENST00000620167 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
LINC01554-203ENST00000620167 FBLN2P98095 1184 aa23.77■■□□□ 1.4
LINC01554-203ENST00000620167 NUP160Q12769 1436 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 977.5 ms