RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
LHX3-203ENST00000619587 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
LHX3-203ENST00000619587 SETD5Q9C0A6 1442 aa24.35■■□□□ 1.49
LHX3-203ENST00000619587 CCER2I3L3R5 266 aa24.33■■□□□ 1.49
LHX3-203ENST00000619587 ANP32CO43423 234 aa24.31■■□□□ 1.48
LHX3-203ENST00000619587 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
LHX3-203ENST00000619587 IRX6P78412 446 aaPredicted RBP24.23■■□□□ 1.47
LHX3-203ENST00000619587 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
LHX3-203ENST00000619587 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
LHX3-203ENST00000619587 PHLDB1Q86UU1 1377 aa24.22■■□□□ 1.47
LHX3-203ENST00000619587 CUX1P39880 1505 aa24.22■■□□□ 1.47
LHX3-203ENST00000619587 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
LHX3-203ENST00000619587 LRRC9Q6ZRR7 1453 aa24.15■■□□□ 1.46
LHX3-203ENST00000619587 TIMELESSQ9UNS1 1208 aa24.14■■□□□ 1.45
LHX3-203ENST00000619587 ERICH6Q7L0X2 663 aa24.13■■□□□ 1.45
LHX3-203ENST00000619587 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
LHX3-203ENST00000619587 HNRNPUQ00839 825 aaKnown RBP eCLIP24.11■■□□□ 1.45
LHX3-203ENST00000619587 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
LHX3-203ENST00000619587 PRKCSHP14314 528 aaPredicted RBP24.09■■□□□ 1.45
LHX3-203ENST00000619587 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
LHX3-203ENST00000619587 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
LHX3-203ENST00000619587 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
LHX3-203ENST00000619587 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
LHX3-203ENST00000619587 IGF1RP08069 1367 aa23.96■■□□□ 1.43
LHX3-203ENST00000619587 CFAP43Q8NDM7 1665 aa23.96■■□□□ 1.43
LHX3-203ENST00000619587 PCF11O94913 1555 aaKnown RBP23.95■■□□□ 1.42
LHX3-203ENST00000619587 DEKP35659 375 aaKnown RBP23.9■■□□□ 1.42
LHX3-203ENST00000619587 PPP4R2Q9NY27 417 aa23.9■■□□□ 1.42
LHX3-203ENST00000619587 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
LHX3-203ENST00000619587 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
LHX3-203ENST00000619587 CCDC184Q52MB2 194 aa23.87■■□□□ 1.41
LHX3-203ENST00000619587 B4GALNT3Q6L9W6 998 aa23.86■■□□□ 1.41
LHX3-203ENST00000619587 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
LHX3-203ENST00000619587 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.41
LHX3-203ENST00000619587 ERICH6BQ5W0A0 696 aa23.82■■□□□ 1.4
LHX3-203ENST00000619587 KDM5BQ9UGL1 1544 aa23.81■■□□□ 1.4
LHX3-203ENST00000619587 CFTRP13569 1480 aa23.81■■□□□ 1.4
LHX3-203ENST00000619587 FHOD3Q2V2M9 1422 aa23.8■■□□□ 1.4
LHX3-203ENST00000619587 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
LHX3-203ENST00000619587 UACAQ9BZF9 1416 aa23.78■■□□□ 1.4
LHX3-203ENST00000619587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
LHX3-203ENST00000619587 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
LHX3-203ENST00000619587 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
LHX3-203ENST00000619587 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
LHX3-203ENST00000619587 NBR1Q14596 966 aa23.75■■□□□ 1.39
LHX3-203ENST00000619587 PAK3O75914 559 aaPredicted RBP23.75■■□□□ 1.39
LHX3-203ENST00000619587 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
LHX3-203ENST00000619587 PTPN23Q9H3S7 1636 aa23.74■■□□□ 1.39
LHX3-203ENST00000619587 FAM9BQ8IZU0 186 aa23.74■■□□□ 1.39
LHX3-203ENST00000619587 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
LHX3-203ENST00000619587 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
LHX3-203ENST00000619587 NOP58Q9Y2X3 529 aaKnown RBP23.72■■□□□ 1.39
LHX3-203ENST00000619587 FYCO1Q9BQS8 1478 aa23.72■■□□□ 1.39
LHX3-203ENST00000619587 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
LHX3-203ENST00000619587 NAIPQ13075 1403 aa23.67■■□□□ 1.38
LHX3-203ENST00000619587 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
LHX3-203ENST00000619587 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
LHX3-203ENST00000619587 NCOA2Q15596 1464 aa23.66■■□□□ 1.38
LHX3-203ENST00000619587 MRS2Q9HD23 443 aa23.65■■□□□ 1.38
LHX3-203ENST00000619587 C11orf95C9JLR9 678 aaPredicted RBP23.64■■□□□ 1.38
LHX3-203ENST00000619587 PRKRIP1Q9H875 184 aaPredicted RBP23.64■■□□□ 1.38
LHX3-203ENST00000619587 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
LHX3-203ENST00000619587 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
LHX3-203ENST00000619587 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
LHX3-203ENST00000619587 MTUS2Q5JR59 1369 aa23.59■■□□□ 1.37
LHX3-203ENST00000619587 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
LHX3-203ENST00000619587 FMN1Q68DA7 1419 aa23.56■■□□□ 1.36
LHX3-203ENST00000619587 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
LHX3-203ENST00000619587 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
LHX3-203ENST00000619587 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
LHX3-203ENST00000619587 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
LHX3-203ENST00000619587 AKNAQ7Z591 1439 aa23.54■■□□□ 1.36
LHX3-203ENST00000619587 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
LHX3-203ENST00000619587 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
LHX3-203ENST00000619587 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
LHX3-203ENST00000619587 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
LHX3-203ENST00000619587 L3MBTL2Q969R5 705 aa23.49■■□□□ 1.35
LHX3-203ENST00000619587 LRRIQ1Q96JM4 1722 aa23.49■■□□□ 1.35
LHX3-203ENST00000619587 IPO9Q96P70 1041 aaKnown RBP23.47■■□□□ 1.35
LHX3-203ENST00000619587 ANP32AP39687 249 aaKnown RBP23.46■■□□□ 1.35
LHX3-203ENST00000619587 FOXD1Q16676 465 aa23.46■■□□□ 1.35
LHX3-203ENST00000619587 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
LHX3-203ENST00000619587 CCDC136Q96JN2 1154 aa23.45■■□□□ 1.34
LHX3-203ENST00000619587 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
LHX3-203ENST00000619587 KDM6BO15054 1643 aa23.44■■□□□ 1.34
LHX3-203ENST00000619587 CTTNBP2Q8WZ74 1663 aa23.43■■□□□ 1.34
LHX3-203ENST00000619587 HECW1Q76N89 1606 aa23.42■■□□□ 1.34
LHX3-203ENST00000619587 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
LHX3-203ENST00000619587 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
LHX3-203ENST00000619587 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
LHX3-203ENST00000619587 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
LHX3-203ENST00000619587 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
LHX3-203ENST00000619587 ZBTB47Q9UFB7 747 aaPredicted RBP23.41■■□□□ 1.34
LHX3-203ENST00000619587 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
LHX3-203ENST00000619587 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
LHX3-203ENST00000619587 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
LHX3-203ENST00000619587 SUPT6HQ7KZ85 1726 aaKnown RBP23.38■■□□□ 1.33
LHX3-203ENST00000619587 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
LHX3-203ENST00000619587 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
LHX3-203ENST00000619587 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms