RNA–Protein interactions for RNA: ENST00000618875.4

SOX13-210, Transcript of SRY-box 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX13, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-210ENST00000618875 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SOX13-210ENST00000618875 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
SOX13-210ENST00000618875 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
SOX13-210ENST00000618875 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
SOX13-210ENST00000618875 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.03
SOX13-210ENST00000618875 ITGAEP38570 1179 aa15.24■□□□□ 0.03
SOX13-210ENST00000618875 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
SOX13-210ENST00000618875 FKBP8Q14318 412 aa15.21■□□□□ 0.03
SOX13-210ENST00000618875 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
SOX13-210ENST00000618875 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
SOX13-210ENST00000618875 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
SOX13-210ENST00000618875 NEFLP07196 543 aa15.19■□□□□ 0.02
SOX13-210ENST00000618875 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
SOX13-210ENST00000618875 CUL7Q14999 1698 aa15.13■□□□□ 0.01
SOX13-210ENST00000618875 APLP2Q06481 763 aa15.11■□□□□ 0.01
SOX13-210ENST00000618875 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
SOX13-210ENST00000618875 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0.01
SOX13-210ENST00000618875 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
SOX13-210ENST00000618875 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
SOX13-210ENST00000618875 PBRM1Q86U86 1689 aa15.05■□□□□ -0
SOX13-210ENST00000618875 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ -0
SOX13-210ENST00000618875 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
SOX13-210ENST00000618875 WDR62O43379 1518 aa15.03■□□□□ -0
SOX13-210ENST00000618875 KCNH8Q96L42 1107 aa15.02■□□□□ -0
SOX13-210ENST00000618875 TRIM52Q96A61 297 aa15□□□□□ -0.01
SOX13-210ENST00000618875 AQRO60306 1485 aaKnown RBP eCLIP14.99□□□□□ -0.012e-8■■■■■ 37
SOX13-210ENST00000618875 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
SOX13-210ENST00000618875 PCF11O94913 1555 aaKnown RBP14.98□□□□□ -0.01
SOX13-210ENST00000618875 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
SOX13-210ENST00000618875 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
SOX13-210ENST00000618875 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
SOX13-210ENST00000618875 NBR1Q14596 966 aa14.96□□□□□ -0.01
SOX13-210ENST00000618875 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
SOX13-210ENST00000618875 FHOD3Q2V2M9 1422 aa14.96□□□□□ -0.02
SOX13-210ENST00000618875 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
SOX13-210ENST00000618875 SAMD9Q5K651 1589 aa14.95□□□□□ -0.02
SOX13-210ENST00000618875 LRRIQ1Q96JM4 1722 aa14.93□□□□□ -0.02
SOX13-210ENST00000618875 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
SOX13-210ENST00000618875 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
SOX13-210ENST00000618875 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
SOX13-210ENST00000618875 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
SOX13-210ENST00000618875 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
SOX13-210ENST00000618875 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
SOX13-210ENST00000618875 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
SOX13-210ENST00000618875 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
SOX13-210ENST00000618875 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
SOX13-210ENST00000618875 RRBP1Q9P2E9 1410 aaKnown RBP14.88□□□□□ -0.03
SOX13-210ENST00000618875 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
SOX13-210ENST00000618875 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
SOX13-210ENST00000618875 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
SOX13-210ENST00000618875 HIRIP3Q9BW71 556 aaPredicted RBP14.87□□□□□ -0.03
SOX13-210ENST00000618875 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
SOX13-210ENST00000618875 CCDC136Q96JN2 1154 aa14.87□□□□□ -0.03
SOX13-210ENST00000618875 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
SOX13-210ENST00000618875 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
SOX13-210ENST00000618875 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
SOX13-210ENST00000618875 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
SOX13-210ENST00000618875 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
SOX13-210ENST00000618875 DEKP35659 375 aaKnown RBP14.84□□□□□ -0.03
SOX13-210ENST00000618875 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
SOX13-210ENST00000618875 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
SOX13-210ENST00000618875 MSH5O43196 834 aa14.78□□□□□ -0.04
SOX13-210ENST00000618875 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.04
SOX13-210ENST00000618875 CNGB1Q14028 1251 aaPredicted RBP14.77□□□□□ -0.04
SOX13-210ENST00000618875 FMN1Q68DA7 1419 aa14.77□□□□□ -0.05
SOX13-210ENST00000618875 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
SOX13-210ENST00000618875 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
SOX13-210ENST00000618875 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
SOX13-210ENST00000618875 UGGT2Q9NYU1 1516 aa14.74□□□□□ -0.05
SOX13-210ENST00000618875 EIF5BO60841 1220 aaKnown RBP14.74□□□□□ -0.05
SOX13-210ENST00000618875 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
SOX13-210ENST00000618875 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
SOX13-210ENST00000618875 DISP1Q96F81 1524 aa14.72□□□□□ -0.05
SOX13-210ENST00000618875 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.06
SOX13-210ENST00000618875 MAGI1Q96QZ7 1491 aaPredicted RBP14.7□□□□□ -0.06
SOX13-210ENST00000618875 KIAA0556O60303 1618 aa14.7□□□□□ -0.06
SOX13-210ENST00000618875 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
SOX13-210ENST00000618875 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
SOX13-210ENST00000618875 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
SOX13-210ENST00000618875 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
SOX13-210ENST00000618875 ANP32CO43423 234 aa14.65□□□□□ -0.06
SOX13-210ENST00000618875 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
SOX13-210ENST00000618875 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
SOX13-210ENST00000618875 CDK13Q14004 1512 aaKnown RBP14.64□□□□□ -0.07
SOX13-210ENST00000618875 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
SOX13-210ENST00000618875 EPRSP07814 1512 aaKnown RBP14.63□□□□□ -0.07
SOX13-210ENST00000618875 NUP160Q12769 1436 aa14.63□□□□□ -0.07
SOX13-210ENST00000618875 NCOA2Q15596 1464 aa14.62□□□□□ -0.07
SOX13-210ENST00000618875 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
SOX13-210ENST00000618875 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
SOX13-210ENST00000618875 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
SOX13-210ENST00000618875 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
SOX13-210ENST00000618875 NPM2Q86SE8 214 aaKnown RBP14.59□□□□□ -0.07
SOX13-210ENST00000618875 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SOX13-210ENST00000618875 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
SOX13-210ENST00000618875 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
SOX13-210ENST00000618875 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
SOX13-210ENST00000618875 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.07
SOX13-210ENST00000618875 MAPKBP1O60336 1514 aa14.57□□□□□ -0.08
SOX13-210ENST00000618875 B4GALNT3Q6L9W6 998 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms