RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.43
VPS45-213ENST00000618148 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
VPS45-213ENST00000618148 PRXQ9BXM0 1461 aa12.36□□□□□ -0.43
VPS45-213ENST00000618148 PBRM1Q86U86 1689 aa12.34□□□□□ -0.43
VPS45-213ENST00000618148 KIF21BO75037 1637 aa12.33□□□□□ -0.44
VPS45-213ENST00000618148 CUL7Q14999 1698 aa12.33□□□□□ -0.44
VPS45-213ENST00000618148 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
VPS45-213ENST00000618148 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
VPS45-213ENST00000618148 DSG3P32926 999 aa12.29□□□□□ -0.44
VPS45-213ENST00000618148 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
VPS45-213ENST00000618148 CARMIL1Q5VZK9 1371 aa12.29□□□□□ -0.44
VPS45-213ENST00000618148 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
VPS45-213ENST00000618148 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
VPS45-213ENST00000618148 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
VPS45-213ENST00000618148 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.44
VPS45-213ENST00000618148 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
VPS45-213ENST00000618148 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
VPS45-213ENST00000618148 CAPN15O75808 1086 aa12.26□□□□□ -0.45
VPS45-213ENST00000618148 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
VPS45-213ENST00000618148 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
VPS45-213ENST00000618148 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
VPS45-213ENST00000618148 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
VPS45-213ENST00000618148 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
VPS45-213ENST00000618148 NUP160Q12769 1436 aa12.16□□□□□ -0.46
VPS45-213ENST00000618148 CHD1O14646 1710 aa12.13□□□□□ -0.47
VPS45-213ENST00000618148 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
VPS45-213ENST00000618148 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
VPS45-213ENST00000618148 CEP170Q5SW79 1584 aa12.12□□□□□ -0.47
VPS45-213ENST00000618148 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
VPS45-213ENST00000618148 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
VPS45-213ENST00000618148 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
VPS45-213ENST00000618148 CEP162Q5TB80 1403 aa12.08□□□□□ -0.48
VPS45-213ENST00000618148 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
VPS45-213ENST00000618148 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
VPS45-213ENST00000618148 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
VPS45-213ENST00000618148 FBLN2P98095 1184 aa12.06□□□□□ -0.48
VPS45-213ENST00000618148 CLIP1P30622 1438 aa12.04□□□□□ -0.48
VPS45-213ENST00000618148 EFCAB5A4FU69 1503 aa12.04□□□□□ -0.48
VPS45-213ENST00000618148 SAMD9Q5K651 1589 aa12.03□□□□□ -0.48
VPS45-213ENST00000618148 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
VPS45-213ENST00000618148 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
VPS45-213ENST00000618148 APLP2Q06481 763 aa12□□□□□ -0.49
VPS45-213ENST00000618148 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
VPS45-213ENST00000618148 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
VPS45-213ENST00000618148 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
VPS45-213ENST00000618148 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
VPS45-213ENST00000618148 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
VPS45-213ENST00000618148 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
VPS45-213ENST00000618148 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
VPS45-213ENST00000618148 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
VPS45-213ENST00000618148 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
VPS45-213ENST00000618148 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
VPS45-213ENST00000618148 FHOD3Q2V2M9 1422 aa11.92□□□□□ -0.5
VPS45-213ENST00000618148 FMN1Q68DA7 1419 aa11.9□□□□□ -0.5
VPS45-213ENST00000618148 ABCB7O75027 752 aa11.9□□□□□ -0.5
VPS45-213ENST00000618148 RANGAP1P46060 587 aaPredicted RBP11.89□□□□□ -0.51
VPS45-213ENST00000618148 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
VPS45-213ENST00000618148 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
VPS45-213ENST00000618148 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
VPS45-213ENST00000618148 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
VPS45-213ENST00000618148 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
VPS45-213ENST00000618148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
VPS45-213ENST00000618148 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
VPS45-213ENST00000618148 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
VPS45-213ENST00000618148 ABCA8O94911 1581 aa11.83□□□□□ -0.52
VPS45-213ENST00000618148 PTPRGP23470 1445 aa11.83□□□□□ -0.52
VPS45-213ENST00000618148 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
VPS45-213ENST00000618148 MAP3K1Q13233 1512 aa11.82□□□□□ -0.52
VPS45-213ENST00000618148 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
VPS45-213ENST00000618148 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
VPS45-213ENST00000618148 RAPGEF6Q8TEU7 1601 aa11.8□□□□□ -0.52
VPS45-213ENST00000618148 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
VPS45-213ENST00000618148 UHRF1BP1LA0JNW5 1464 aa11.79□□□□□ -0.52
VPS45-213ENST00000618148 NUP153P49790 1475 aaKnown RBP11.79□□□□□ -0.52
VPS45-213ENST00000618148 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
VPS45-213ENST00000618148 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
VPS45-213ENST00000618148 CFAP43Q8NDM7 1665 aa11.77□□□□□ -0.53
VPS45-213ENST00000618148 RIMBP3CA6NJZ7 1639 aa11.77□□□□□ -0.53
VPS45-213ENST00000618148 RIMBP3BA6NNM3 1639 aa11.77□□□□□ -0.53
VPS45-213ENST00000618148 RIMBP3Q9UFD9 1639 aa11.77□□□□□ -0.53
VPS45-213ENST00000618148 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
VPS45-213ENST00000618148 TIAM1Q13009 1591 aa11.76□□□□□ -0.53
VPS45-213ENST00000618148 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
VPS45-213ENST00000618148 LRRIQ1Q96JM4 1722 aa11.76□□□□□ -0.53
VPS45-213ENST00000618148 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
VPS45-213ENST00000618148 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
VPS45-213ENST00000618148 KDM5BQ9UGL1 1544 aa11.72□□□□□ -0.53
VPS45-213ENST00000618148 ATP10BO94823 1461 aa11.71□□□□□ -0.53
VPS45-213ENST00000618148 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
VPS45-213ENST00000618148 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.54
VPS45-213ENST00000618148 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
VPS45-213ENST00000618148 TTBK1Q5TCY1 1321 aaPredicted RBP11.68□□□□□ -0.54
VPS45-213ENST00000618148 MAGI3Q5TCQ9 1506 aa11.68□□□□□ -0.54
VPS45-213ENST00000618148 EHBP1L1Q8N3D4 1523 aa11.67□□□□□ -0.54
VPS45-213ENST00000618148 ZCCHC11Q5TAX3 1644 aaKnown RBP11.66□□□□□ -0.54
VPS45-213ENST00000618148 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
VPS45-213ENST00000618148 TROQ12816 1431 aaPredicted RBP11.65□□□□□ -0.55
VPS45-213ENST00000618148 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.55
VPS45-213ENST00000618148 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
VPS45-213ENST00000618148 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms