RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
VPS45-213ENST00000618148 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
VPS45-213ENST00000618148 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.42
VPS45-213ENST00000618148 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
VPS45-213ENST00000618148 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
VPS45-213ENST00000618148 FOXD1Q16676 465 aa16.5■□□□□ 0.23
VPS45-213ENST00000618148 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
VPS45-213ENST00000618148 MSH5O43196 834 aa15.7■□□□□ 0.1
VPS45-213ENST00000618148 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
VPS45-213ENST00000618148 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
VPS45-213ENST00000618148 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
VPS45-213ENST00000618148 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
VPS45-213ENST00000618148 ADRA2BP18089 450 aa14.97□□□□□ -0.01
VPS45-213ENST00000618148 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
VPS45-213ENST00000618148 ABCC9O60706 1549 aa14.76□□□□□ -0.05
VPS45-213ENST00000618148 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
VPS45-213ENST00000618148 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
VPS45-213ENST00000618148 NACADO15069 1562 aa14.51□□□□□ -0.09
VPS45-213ENST00000618148 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
VPS45-213ENST00000618148 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
VPS45-213ENST00000618148 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
VPS45-213ENST00000618148 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
VPS45-213ENST00000618148 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
VPS45-213ENST00000618148 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
VPS45-213ENST00000618148 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
VPS45-213ENST00000618148 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
VPS45-213ENST00000618148 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
VPS45-213ENST00000618148 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
VPS45-213ENST00000618148 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
VPS45-213ENST00000618148 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
VPS45-213ENST00000618148 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
VPS45-213ENST00000618148 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
VPS45-213ENST00000618148 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
VPS45-213ENST00000618148 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
VPS45-213ENST00000618148 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
VPS45-213ENST00000618148 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
VPS45-213ENST00000618148 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
VPS45-213ENST00000618148 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
VPS45-213ENST00000618148 WIZO95785 1651 aa13.43□□□□□ -0.26
VPS45-213ENST00000618148 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
VPS45-213ENST00000618148 NCAPD3P42695 1498 aa13.39□□□□□ -0.27
VPS45-213ENST00000618148 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
VPS45-213ENST00000618148 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
VPS45-213ENST00000618148 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
VPS45-213ENST00000618148 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
VPS45-213ENST00000618148 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
VPS45-213ENST00000618148 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
VPS45-213ENST00000618148 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
VPS45-213ENST00000618148 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
VPS45-213ENST00000618148 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
VPS45-213ENST00000618148 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
VPS45-213ENST00000618148 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
VPS45-213ENST00000618148 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
VPS45-213ENST00000618148 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
VPS45-213ENST00000618148 CFTRP13569 1480 aa13.01□□□□□ -0.33
VPS45-213ENST00000618148 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
VPS45-213ENST00000618148 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
VPS45-213ENST00000618148 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
VPS45-213ENST00000618148 NESP48681 1621 aa12.9□□□□□ -0.34
VPS45-213ENST00000618148 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
VPS45-213ENST00000618148 FANCD2Q9BXW9 1451 aa12.83□□□□□ -0.36
VPS45-213ENST00000618148 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
VPS45-213ENST00000618148 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
VPS45-213ENST00000618148 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
VPS45-213ENST00000618148 KIF21AQ7Z4S6 1674 aa12.76□□□□□ -0.37
VPS45-213ENST00000618148 CUX1P39880 1505 aa12.72□□□□□ -0.37
VPS45-213ENST00000618148 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
VPS45-213ENST00000618148 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
VPS45-213ENST00000618148 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
VPS45-213ENST00000618148 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
VPS45-213ENST00000618148 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
VPS45-213ENST00000618148 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
VPS45-213ENST00000618148 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
VPS45-213ENST00000618148 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
VPS45-213ENST00000618148 WDR62O43379 1518 aa12.67□□□□□ -0.38
VPS45-213ENST00000618148 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
VPS45-213ENST00000618148 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
VPS45-213ENST00000618148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPS45-213ENST00000618148 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
VPS45-213ENST00000618148 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
VPS45-213ENST00000618148 CUX2O14529 1486 aa12.55□□□□□ -0.4
VPS45-213ENST00000618148 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
VPS45-213ENST00000618148 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
VPS45-213ENST00000618148 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
VPS45-213ENST00000618148 WDR97A6NE52 1622 aa12.52□□□□□ -0.41
VPS45-213ENST00000618148 SOGA1O94964 1423 aa12.52□□□□□ -0.41
VPS45-213ENST00000618148 POTEHQ6S545 545 aa12.51□□□□□ -0.41
VPS45-213ENST00000618148 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
VPS45-213ENST00000618148 RAD54L2Q9Y4B4 1467 aa12.5□□□□□ -0.41
VPS45-213ENST00000618148 EEA1Q15075 1411 aa12.5□□□□□ -0.41
VPS45-213ENST00000618148 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
VPS45-213ENST00000618148 ABCA5Q8WWZ7 1642 aa12.45□□□□□ -0.42
VPS45-213ENST00000618148 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
VPS45-213ENST00000618148 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
VPS45-213ENST00000618148 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
VPS45-213ENST00000618148 TDRD9Q8NDG6 1382 aaKnown RBP12.39□□□□□ -0.43
VPS45-213ENST00000618148 ERICH3Q5RHP9 1530 aa12.38□□□□□ -0.43
VPS45-213ENST00000618148 IGF1RP08069 1367 aa12.38□□□□□ -0.43
VPS45-213ENST00000618148 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
VPS45-213ENST00000618148 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms