RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
CBX5-206ENST00000618078 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
CBX5-206ENST00000618078 FHOD3Q2V2M9 1422 aa23.12■■□□□ 1.29
CBX5-206ENST00000618078 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
CBX5-206ENST00000618078 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
CBX5-206ENST00000618078 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
CBX5-206ENST00000618078 EFCAB5A4FU69 1503 aa23.07■■□□□ 1.28
CBX5-206ENST00000618078 PCF11O94913 1555 aaKnown RBP23.07■■□□□ 1.28
CBX5-206ENST00000618078 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
CBX5-206ENST00000618078 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
CBX5-206ENST00000618078 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
CBX5-206ENST00000618078 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
CBX5-206ENST00000618078 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
CBX5-206ENST00000618078 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
CBX5-206ENST00000618078 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
CBX5-206ENST00000618078 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
CBX5-206ENST00000618078 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
CBX5-206ENST00000618078 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
CBX5-206ENST00000618078 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
CBX5-206ENST00000618078 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
CBX5-206ENST00000618078 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
CBX5-206ENST00000618078 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
CBX5-206ENST00000618078 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
CBX5-206ENST00000618078 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
CBX5-206ENST00000618078 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
CBX5-206ENST00000618078 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
CBX5-206ENST00000618078 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
CBX5-206ENST00000618078 LRRIQ1Q96JM4 1722 aa22.84■■□□□ 1.25
CBX5-206ENST00000618078 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
CBX5-206ENST00000618078 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CBX5-206ENST00000618078 ITGAEP38570 1179 aa22.76■■□□□ 1.23
CBX5-206ENST00000618078 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
CBX5-206ENST00000618078 UGGT2Q9NYU1 1516 aa22.73■■□□□ 1.23
CBX5-206ENST00000618078 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
CBX5-206ENST00000618078 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
CBX5-206ENST00000618078 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
CBX5-206ENST00000618078 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
CBX5-206ENST00000618078 FBLN2P98095 1184 aa22.67■■□□□ 1.22
CBX5-206ENST00000618078 MTUS2Q5JR59 1369 aa22.67■■□□□ 1.22
CBX5-206ENST00000618078 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
CBX5-206ENST00000618078 KIAA0556O60303 1618 aa22.65■■□□□ 1.22
CBX5-206ENST00000618078 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
CBX5-206ENST00000618078 HECW1Q76N89 1606 aa22.63■■□□□ 1.21
CBX5-206ENST00000618078 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
CBX5-206ENST00000618078 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
CBX5-206ENST00000618078 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
CBX5-206ENST00000618078 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
CBX5-206ENST00000618078 ARID3CA6NKF2 412 aa22.59■■□□□ 1.21
CBX5-206ENST00000618078 CCDC18Q5T9S5 1454 aa22.58■■□□□ 1.21
CBX5-206ENST00000618078 NCOA2Q15596 1464 aa22.58■■□□□ 1.21
CBX5-206ENST00000618078 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.2
CBX5-206ENST00000618078 NUP160Q12769 1436 aa22.56■■□□□ 1.2
CBX5-206ENST00000618078 FGD6Q6ZV73 1430 aa22.56■■□□□ 1.2
CBX5-206ENST00000618078 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
CBX5-206ENST00000618078 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
CBX5-206ENST00000618078 MYOM3Q5VTT5 1437 aa22.49■■□□□ 1.19
CBX5-206ENST00000618078 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
CBX5-206ENST00000618078 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
CBX5-206ENST00000618078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.48■■□□□ 1.192e-12■□□□□ 8.8
CBX5-206ENST00000618078 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
CBX5-206ENST00000618078 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
CBX5-206ENST00000618078 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
CBX5-206ENST00000618078 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
CBX5-206ENST00000618078 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
CBX5-206ENST00000618078 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
CBX5-206ENST00000618078 CHD1O14646 1710 aa22.42■■□□□ 1.18
CBX5-206ENST00000618078 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
CBX5-206ENST00000618078 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.18
CBX5-206ENST00000618078 MAPKBP1O60336 1514 aa22.37■■□□□ 1.17
CBX5-206ENST00000618078 TCOF1Q13428 1488 aaKnown RBP22.32■■□□□ 1.16
CBX5-206ENST00000618078 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
CBX5-206ENST00000618078 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
CBX5-206ENST00000618078 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
CBX5-206ENST00000618078 ABCA8O94911 1581 aa22.27■■□□□ 1.16
CBX5-206ENST00000618078 MIA2Q96PC5 1412 aa22.26■■□□□ 1.15
CBX5-206ENST00000618078 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
CBX5-206ENST00000618078 TROQ12816 1431 aaPredicted RBP22.25■■□□□ 1.15
CBX5-206ENST00000618078 NAIPQ13075 1403 aa22.25■■□□□ 1.15
CBX5-206ENST00000618078 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
CBX5-206ENST00000618078 KIF14Q15058 1648 aa22.23■■□□□ 1.15
CBX5-206ENST00000618078 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
CBX5-206ENST00000618078 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
CBX5-206ENST00000618078 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
CBX5-206ENST00000618078 ZNF644Q9H582 1327 aaPredicted RBP22.19■■□□□ 1.14
CBX5-206ENST00000618078 ATP10BO94823 1461 aa22.18■■□□□ 1.14
CBX5-206ENST00000618078 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
CBX5-206ENST00000618078 PTPRGP23470 1445 aa22.18■■□□□ 1.14
CBX5-206ENST00000618078 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
CBX5-206ENST00000618078 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
CBX5-206ENST00000618078 GCC2Q8IWJ2 1684 aa22.15■■□□□ 1.14
CBX5-206ENST00000618078 KDM6BO15054 1643 aa22.13■■□□□ 1.13
CBX5-206ENST00000618078 UACAQ9BZF9 1416 aa22.13■■□□□ 1.13
CBX5-206ENST00000618078 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
CBX5-206ENST00000618078 DAPK1P53355 1430 aa22.12■■□□□ 1.13
CBX5-206ENST00000618078 GPATCH8Q9UKJ3 1502 aaKnown RBP22.12■■□□□ 1.13
CBX5-206ENST00000618078 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
CBX5-206ENST00000618078 ITSN2Q9NZM3 1697 aa22.11■■□□□ 1.13
CBX5-206ENST00000618078 ABCC5O15440 1437 aa22.1■■□□□ 1.13
CBX5-206ENST00000618078 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
CBX5-206ENST00000618078 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms