RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NPM1P06748 294 aaKnown RBP eCLIP31.77■■■□□ 2.68
TRAPPC3-209ENST00000616395 TOP2BQ02880 1626 aa31.76■■■□□ 2.68
TRAPPC3-209ENST00000616395 BIVM-ERCC5R4GMW8 1640 aa31.76■■■□□ 2.67
TRAPPC3-209ENST00000616395 MAPKBP1O60336 1514 aa31.75■■■□□ 2.67
TRAPPC3-209ENST00000616395 DIP2BQ9P265 1576 aa31.74■■■□□ 2.67
TRAPPC3-209ENST00000616395 KDM6BO15054 1643 aa31.68■■■□□ 2.66
TRAPPC3-209ENST00000616395 ILDR1Q86SU0 546 aaPredicted RBP31.67■■■□□ 2.66
TRAPPC3-209ENST00000616395 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
TRAPPC3-209ENST00000616395 ADCY10Q96PN6 1610 aa31.66■■■□□ 2.66
TRAPPC3-209ENST00000616395 TSPOAP1O95153 1857 aa31.53■■■□□ 2.64
TRAPPC3-209ENST00000616395 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
TRAPPC3-209ENST00000616395 KIAA0586Q9BVV6 1533 aa31.42■■■□□ 2.62
TRAPPC3-209ENST00000616395 PTPRGP23470 1445 aa31.31■■■□□ 2.6
TRAPPC3-209ENST00000616395 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
TRAPPC3-209ENST00000616395 TTBK1Q5TCY1 1321 aaPredicted RBP31.28■■■□□ 2.6
TRAPPC3-209ENST00000616395 IGF1RP08069 1367 aa31.27■■■□□ 2.6
TRAPPC3-209ENST00000616395 PPRC1Q5VV67 1664 aaKnown RBP31.24■■■□□ 2.59
TRAPPC3-209ENST00000616395 ABCC2Q92887 1545 aa31.24■■■□□ 2.59
TRAPPC3-209ENST00000616395 ASXL2Q76L83 1435 aa31.23■■■□□ 2.59
TRAPPC3-209ENST00000616395 GLI2P10070 1586 aa31.21■■■□□ 2.59
TRAPPC3-209ENST00000616395 PLB1Q6P1J6 1458 aa31.19■■■□□ 2.58
TRAPPC3-209ENST00000616395 CUL7Q14999 1698 aa31.18■■■□□ 2.58
TRAPPC3-209ENST00000616395 TNIKQ9UKE5 1360 aa31.17■■■□□ 2.58
TRAPPC3-209ENST00000616395 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
TRAPPC3-209ENST00000616395 KIF27Q86VH2 1401 aa31.14■■■□□ 2.58
TRAPPC3-209ENST00000616395 HECW2Q9P2P5 1572 aa31.14■■■□□ 2.57
TRAPPC3-209ENST00000616395 CARMIL2Q6F5E8 1435 aa31.12■■■□□ 2.57
TRAPPC3-209ENST00000616395 UHRF1BP1LA0JNW5 1464 aa31.08■■■□□ 2.57
TRAPPC3-209ENST00000616395 EPRSP07814 1512 aaKnown RBP31.03■■■□□ 2.56
TRAPPC3-209ENST00000616395 UACAQ9BZF9 1416 aa31.03■■■□□ 2.56
TRAPPC3-209ENST00000616395 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
TRAPPC3-209ENST00000616395 MAP3K4Q9Y6R4 1608 aa31.02■■■□□ 2.56
TRAPPC3-209ENST00000616395 IQGAP2Q13576 1575 aa30.99■■■□□ 2.55
TRAPPC3-209ENST00000616395 TEX14Q8IWB6 1497 aa30.98■■■□□ 2.55
TRAPPC3-209ENST00000616395 KDM5BQ9UGL1 1544 aa30.95■■■□□ 2.55
TRAPPC3-209ENST00000616395 DISP1Q96F81 1524 aa30.93■■■□□ 2.54
TRAPPC3-209ENST00000616395 ZCCHC11Q5TAX3 1644 aaKnown RBP30.87■■■□□ 2.53
TRAPPC3-209ENST00000616395 WDR7Q9Y4E6 1490 aa30.78■■■□□ 2.52
TRAPPC3-209ENST00000616395 UGGT2Q9NYU1 1516 aa30.76■■■□□ 2.51
TRAPPC3-209ENST00000616395 FBXO41Q8TF61 875 aa30.73■■■□□ 2.51
TRAPPC3-209ENST00000616395 KIAA0556O60303 1618 aa30.71■■■□□ 2.51
TRAPPC3-209ENST00000616395 CD109Q6YHK3 1445 aa30.69■■■□□ 2.5
TRAPPC3-209ENST00000616395 MAGI3Q5TCQ9 1506 aa30.68■■■□□ 2.5
TRAPPC3-209ENST00000616395 KCNH8Q96L42 1107 aa30.64■■■□□ 2.5
TRAPPC3-209ENST00000616395 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
TRAPPC3-209ENST00000616395 KIF21BO75037 1637 aa30.62■■■□□ 2.49
TRAPPC3-209ENST00000616395 CFAP43Q8NDM7 1665 aa30.62■■■□□ 2.49
TRAPPC3-209ENST00000616395 ABCA8O94911 1581 aa30.5■■■□□ 2.47
TRAPPC3-209ENST00000616395 PTPRMP28827 1452 aa30.47■■■□□ 2.47
TRAPPC3-209ENST00000616395 ARAP3Q8WWN8 1544 aa30.47■■■□□ 2.47
TRAPPC3-209ENST00000616395 GOLGA3Q08378 1498 aa30.43■■■□□ 2.46
TRAPPC3-209ENST00000616395 ADAMTSL3P82987 1691 aa30.41■■■□□ 2.46
TRAPPC3-209ENST00000616395 CTTNBP2Q8WZ74 1663 aa30.38■■■□□ 2.45
TRAPPC3-209ENST00000616395 ARID3CA6NKF2 412 aa30.34■■■□□ 2.45
TRAPPC3-209ENST00000616395 RAPGEF3O95398 923 aa30.32■■■□□ 2.44
TRAPPC3-209ENST00000616395 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
TRAPPC3-209ENST00000616395 PHLDB1Q86UU1 1377 aa30.29■■■□□ 2.44
TRAPPC3-209ENST00000616395 LMTK3Q96Q04 1460 aa30.28■■■□□ 2.44
TRAPPC3-209ENST00000616395 ATP10BO94823 1461 aa30.27■■■□□ 2.44
TRAPPC3-209ENST00000616395 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
TRAPPC3-209ENST00000616395 ABCA9Q8IUA7 1624 aa30.25■■■□□ 2.43
TRAPPC3-209ENST00000616395 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
TRAPPC3-209ENST00000616395 ARID4BQ4LE39 1312 aaPredicted RBP30.24■■■□□ 2.43
TRAPPC3-209ENST00000616395 NEO1Q92859 1461 aa30.19■■■□□ 2.42
TRAPPC3-209ENST00000616395 FRMPD1Q5SYB0 1578 aa30.19■■■□□ 2.42
TRAPPC3-209ENST00000616395 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
TRAPPC3-209ENST00000616395 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
TRAPPC3-209ENST00000616395 HSPA2P54652 639 aa30.13■■■□□ 2.41
TRAPPC3-209ENST00000616395 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
TRAPPC3-209ENST00000616395 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
TRAPPC3-209ENST00000616395 ARHGEF40Q8TER5 1519 aa30.06■■■□□ 2.4
TRAPPC3-209ENST00000616395 PLPPR3Q6T4P5 718 aa30.05■■■□□ 2.4
TRAPPC3-209ENST00000616395 CERKQ8TCT0 537 aa30.04■■■□□ 2.4
TRAPPC3-209ENST00000616395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
TRAPPC3-209ENST00000616395 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
TRAPPC3-209ENST00000616395 RAPGEF6Q8TEU7 1601 aa30■■■□□ 2.39
TRAPPC3-209ENST00000616395 DENND4BO75064 1496 aaPredicted RBP29.99■■■□□ 2.39
TRAPPC3-209ENST00000616395 RICTORQ6R327 1708 aa29.96■■■□□ 2.39
TRAPPC3-209ENST00000616395 SAMD9Q5K651 1589 aa29.94■■■□□ 2.38
TRAPPC3-209ENST00000616395 POGZQ7Z3K3 1410 aa29.94■■■□□ 2.38
TRAPPC3-209ENST00000616395 FHOD3Q2V2M9 1422 aa29.93■■■□□ 2.38
TRAPPC3-209ENST00000616395 NUP153P49790 1475 aaKnown RBP29.92■■■□□ 2.38
TRAPPC3-209ENST00000616395 AKNAQ7Z591 1439 aa29.92■■■□□ 2.38
TRAPPC3-209ENST00000616395 FANCAO15360 1455 aa29.91■■■□□ 2.38
TRAPPC3-209ENST00000616395 SIGLEC1Q9BZZ2 1709 aa29.89■■■□□ 2.38
TRAPPC3-209ENST00000616395 ILDR2Q71H61 639 aa29.89■■■□□ 2.38
TRAPPC3-209ENST00000616395 YEATS2Q9ULM3 1422 aa29.87■■■□□ 2.37
TRAPPC3-209ENST00000616395 DISP3Q9P2K9 1392 aa29.86■■■□□ 2.37
TRAPPC3-209ENST00000616395 ZMYM4Q5VZL5 1548 aa29.86■■■□□ 2.37
TRAPPC3-209ENST00000616395 ZFYVE16Q7Z3T8 1539 aa29.86■■■□□ 2.37
TRAPPC3-209ENST00000616395 MLECQ14165 292 aa29.85■■■□□ 2.37
TRAPPC3-209ENST00000616395 PLEKHD1A6NEE1 506 aa29.84■■■□□ 2.37
TRAPPC3-209ENST00000616395 CFAP74Q9C0B2 1584 aa29.83■■■□□ 2.37
TRAPPC3-209ENST00000616395 EFCAB5A4FU69 1503 aa29.82■■■□□ 2.36
TRAPPC3-209ENST00000616395 SOCS7O14512 581 aa29.81■■■□□ 2.36
TRAPPC3-209ENST00000616395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.36
TRAPPC3-209ENST00000616395 TTC37Q6PGP7 1564 aa29.79■■■□□ 2.36
TRAPPC3-209ENST00000616395 MAGI2Q86UL8 1455 aa29.78■■■□□ 2.36
TRAPPC3-209ENST00000616395 FER1L4A9Z1Z3 1794 aa29.78■■■□□ 2.36
TRAPPC3-209ENST00000616395 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms