RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
SNX9-202ENST00000614703 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
SNX9-202ENST00000614703 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
SNX9-202ENST00000614703 DIP2BQ9P265 1576 aa17.31■□□□□ 0.36
SNX9-202ENST00000614703 KDM6BO15054 1643 aa17.29■□□□□ 0.36
SNX9-202ENST00000614703 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
SNX9-202ENST00000614703 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
SNX9-202ENST00000614703 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
SNX9-202ENST00000614703 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
SNX9-202ENST00000614703 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
SNX9-202ENST00000614703 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
SNX9-202ENST00000614703 CUL7Q14999 1698 aa17.14■□□□□ 0.33
SNX9-202ENST00000614703 PTPRGP23470 1445 aa17.12■□□□□ 0.33
SNX9-202ENST00000614703 ILDR1Q86SU0 546 aaPredicted RBP17.11■□□□□ 0.33
SNX9-202ENST00000614703 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
SNX9-202ENST00000614703 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
SNX9-202ENST00000614703 PLB1Q6P1J6 1458 aa17.09■□□□□ 0.33
SNX9-202ENST00000614703 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
SNX9-202ENST00000614703 GLI2P10070 1586 aa17.07■□□□□ 0.32
SNX9-202ENST00000614703 IGF1RP08069 1367 aa17.07■□□□□ 0.32
SNX9-202ENST00000614703 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
SNX9-202ENST00000614703 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
SNX9-202ENST00000614703 ADGRL1O94910 1474 aa17.03■□□□□ 0.32
SNX9-202ENST00000614703 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
SNX9-202ENST00000614703 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
SNX9-202ENST00000614703 TTBK1Q5TCY1 1321 aaPredicted RBP17■□□□□ 0.31
SNX9-202ENST00000614703 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
SNX9-202ENST00000614703 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
SNX9-202ENST00000614703 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
SNX9-202ENST00000614703 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
SNX9-202ENST00000614703 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
SNX9-202ENST00000614703 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
SNX9-202ENST00000614703 KDM5BQ9UGL1 1544 aa16.92■□□□□ 0.3
SNX9-202ENST00000614703 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
SNX9-202ENST00000614703 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
SNX9-202ENST00000614703 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
SNX9-202ENST00000614703 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
SNX9-202ENST00000614703 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
SNX9-202ENST00000614703 WDR7Q9Y4E6 1490 aa16.83■□□□□ 0.28
SNX9-202ENST00000614703 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
SNX9-202ENST00000614703 CFAP43Q8NDM7 1665 aa16.8■□□□□ 0.28
SNX9-202ENST00000614703 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
SNX9-202ENST00000614703 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
SNX9-202ENST00000614703 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
SNX9-202ENST00000614703 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
SNX9-202ENST00000614703 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
SNX9-202ENST00000614703 FBXO41Q8TF61 875 aa16.73■□□□□ 0.27
SNX9-202ENST00000614703 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
SNX9-202ENST00000614703 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
SNX9-202ENST00000614703 KIF21BO75037 1637 aa16.68■□□□□ 0.26
SNX9-202ENST00000614703 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
SNX9-202ENST00000614703 ARAP3Q8WWN8 1544 aa16.67■□□□□ 0.26
SNX9-202ENST00000614703 ABCA8O94911 1581 aa16.67■□□□□ 0.26
SNX9-202ENST00000614703 PTPRMP28827 1452 aa16.6■□□□□ 0.25
SNX9-202ENST00000614703 ADAMTSL3P82987 1691 aa16.59■□□□□ 0.25
SNX9-202ENST00000614703 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
SNX9-202ENST00000614703 NEO1Q92859 1461 aa16.55■□□□□ 0.24
SNX9-202ENST00000614703 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
SNX9-202ENST00000614703 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
SNX9-202ENST00000614703 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.24
SNX9-202ENST00000614703 ATP10BO94823 1461 aa16.52■□□□□ 0.23
SNX9-202ENST00000614703 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
SNX9-202ENST00000614703 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
SNX9-202ENST00000614703 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
SNX9-202ENST00000614703 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
SNX9-202ENST00000614703 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
SNX9-202ENST00000614703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
SNX9-202ENST00000614703 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
SNX9-202ENST00000614703 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
SNX9-202ENST00000614703 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
SNX9-202ENST00000614703 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
SNX9-202ENST00000614703 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
SNX9-202ENST00000614703 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
SNX9-202ENST00000614703 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
SNX9-202ENST00000614703 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
SNX9-202ENST00000614703 DENND4BO75064 1496 aaPredicted RBP16.42■□□□□ 0.22
SNX9-202ENST00000614703 SAMD9Q5K651 1589 aa16.4■□□□□ 0.22
SNX9-202ENST00000614703 FANCAO15360 1455 aa16.4■□□□□ 0.22
SNX9-202ENST00000614703 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
SNX9-202ENST00000614703 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
SNX9-202ENST00000614703 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
SNX9-202ENST00000614703 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
SNX9-202ENST00000614703 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
SNX9-202ENST00000614703 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
SNX9-202ENST00000614703 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
SNX9-202ENST00000614703 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
SNX9-202ENST00000614703 ZMYM4Q5VZL5 1548 aa16.34■□□□□ 0.21
SNX9-202ENST00000614703 HSPA2P54652 639 aa16.33■□□□□ 0.2
SNX9-202ENST00000614703 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
SNX9-202ENST00000614703 FER1L4A9Z1Z3 1794 aa16.31■□□□□ 0.2
SNX9-202ENST00000614703 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
SNX9-202ENST00000614703 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
SNX9-202ENST00000614703 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
SNX9-202ENST00000614703 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
SNX9-202ENST00000614703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.21e-12■■■■□ 25.5
SNX9-202ENST00000614703 PREX1Q8TCU6 1659 aa16.26■□□□□ 0.19
SNX9-202ENST00000614703 MLECQ14165 292 aa16.25■□□□□ 0.19
SNX9-202ENST00000614703 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
SNX9-202ENST00000614703 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
SNX9-202ENST00000614703 DISP3Q9P2K9 1392 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms