RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
ATF3-211ENST00000613954 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
ATF3-211ENST00000613954 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
ATF3-211ENST00000613954 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
ATF3-211ENST00000613954 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.27
ATF3-211ENST00000613954 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.278e-7■□□□□ 9.1
ATF3-211ENST00000613954 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
ATF3-211ENST00000613954 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
ATF3-211ENST00000613954 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
ATF3-211ENST00000613954 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
ATF3-211ENST00000613954 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
ATF3-211ENST00000613954 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
ATF3-211ENST00000613954 FHAD1B1AJZ9 1412 aa16.71■□□□□ 0.27
ATF3-211ENST00000613954 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
ATF3-211ENST00000613954 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
ATF3-211ENST00000613954 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
ATF3-211ENST00000613954 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
ATF3-211ENST00000613954 APLP2Q06481 763 aa16.65■□□□□ 0.26
ATF3-211ENST00000613954 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
ATF3-211ENST00000613954 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
ATF3-211ENST00000613954 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
ATF3-211ENST00000613954 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
ATF3-211ENST00000613954 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
ATF3-211ENST00000613954 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
ATF3-211ENST00000613954 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
ATF3-211ENST00000613954 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
ATF3-211ENST00000613954 SYNJ2O15056 1496 aa16.52■□□□□ 0.24
ATF3-211ENST00000613954 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
ATF3-211ENST00000613954 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
ATF3-211ENST00000613954 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
ATF3-211ENST00000613954 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
ATF3-211ENST00000613954 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
ATF3-211ENST00000613954 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
ATF3-211ENST00000613954 CASKIN1Q8WXD9 1431 aa16.47■□□□□ 0.23
ATF3-211ENST00000613954 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
ATF3-211ENST00000613954 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
ATF3-211ENST00000613954 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
ATF3-211ENST00000613954 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
ATF3-211ENST00000613954 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
ATF3-211ENST00000613954 MIER1Q8N108 512 aa16.45■□□□□ 0.22
ATF3-211ENST00000613954 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
ATF3-211ENST00000613954 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
ATF3-211ENST00000613954 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
ATF3-211ENST00000613954 NUP160Q12769 1436 aa16.42■□□□□ 0.22
ATF3-211ENST00000613954 FBLN2P98095 1184 aa16.41■□□□□ 0.22
ATF3-211ENST00000613954 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
ATF3-211ENST00000613954 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
ATF3-211ENST00000613954 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
ATF3-211ENST00000613954 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
ATF3-211ENST00000613954 RRBP1Q9P2E9 1410 aaKnown RBP16.32■□□□□ 0.2
ATF3-211ENST00000613954 HECW1Q76N89 1606 aa16.31■□□□□ 0.2
ATF3-211ENST00000613954 CHD1O14646 1710 aa16.3■□□□□ 0.2
ATF3-211ENST00000613954 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
ATF3-211ENST00000613954 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
ATF3-211ENST00000613954 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
ATF3-211ENST00000613954 CARMIL2Q6F5E8 1435 aa16.29■□□□□ 0.2
ATF3-211ENST00000613954 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
ATF3-211ENST00000613954 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
ATF3-211ENST00000613954 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
ATF3-211ENST00000613954 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
ATF3-211ENST00000613954 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
ATF3-211ENST00000613954 EHBP1L1Q8N3D4 1523 aa16.23■□□□□ 0.19
ATF3-211ENST00000613954 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
ATF3-211ENST00000613954 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
ATF3-211ENST00000613954 SUPT6HQ7KZ85 1726 aaKnown RBP16.18■□□□□ 0.18
ATF3-211ENST00000613954 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
ATF3-211ENST00000613954 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
ATF3-211ENST00000613954 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
ATF3-211ENST00000613954 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
ATF3-211ENST00000613954 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
ATF3-211ENST00000613954 PLB1Q6P1J6 1458 aa16.14■□□□□ 0.17
ATF3-211ENST00000613954 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
ATF3-211ENST00000613954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.176e-7■□□□□ 11.3
ATF3-211ENST00000613954 CLASP1Q7Z460 1538 aa16.13■□□□□ 0.17
ATF3-211ENST00000613954 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
ATF3-211ENST00000613954 ABCA8O94911 1581 aa16.12■□□□□ 0.17
ATF3-211ENST00000613954 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
ATF3-211ENST00000613954 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
ATF3-211ENST00000613954 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
ATF3-211ENST00000613954 PTPRGP23470 1445 aa16.1■□□□□ 0.17
ATF3-211ENST00000613954 FAM50AQ14320 339 aaKnown RBP16.1■□□□□ 0.17
ATF3-211ENST00000613954 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
ATF3-211ENST00000613954 ITGAEP38570 1179 aa16.07■□□□□ 0.16
ATF3-211ENST00000613954 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
ATF3-211ENST00000613954 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
ATF3-211ENST00000613954 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
ATF3-211ENST00000613954 ATP10BO94823 1461 aa16.02■□□□□ 0.15
ATF3-211ENST00000613954 MIA2Q96PC5 1412 aa16.02■□□□□ 0.15
ATF3-211ENST00000613954 TCOF1Q13428 1488 aaKnown RBP16.01■□□□□ 0.15
ATF3-211ENST00000613954 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
ATF3-211ENST00000613954 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
ATF3-211ENST00000613954 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
ATF3-211ENST00000613954 RAB3GAP2Q9H2M9 1393 aa15.97■□□□□ 0.15
ATF3-211ENST00000613954 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
ATF3-211ENST00000613954 MAPKBP1O60336 1514 aa15.97■□□□□ 0.15
ATF3-211ENST00000613954 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
ATF3-211ENST00000613954 KIF14Q15058 1648 aa15.95■□□□□ 0.14
ATF3-211ENST00000613954 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
ATF3-211ENST00000613954 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
ATF3-211ENST00000613954 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms