RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
SLIRP-212ENST00000613856 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
SLIRP-212ENST00000613856 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
SLIRP-212ENST00000613856 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
SLIRP-212ENST00000613856 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
SLIRP-212ENST00000613856 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
SLIRP-212ENST00000613856 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
SLIRP-212ENST00000613856 KDM4FA0A1W2PPD8 638 aa19.13■□□□□ 0.65
SLIRP-212ENST00000613856 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
SLIRP-212ENST00000613856 KDM6BO15054 1643 aa19.1■□□□□ 0.65
SLIRP-212ENST00000613856 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
SLIRP-212ENST00000613856 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
SLIRP-212ENST00000613856 EEA1Q15075 1411 aa18.98■□□□□ 0.63
SLIRP-212ENST00000613856 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
SLIRP-212ENST00000613856 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
SLIRP-212ENST00000613856 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
SLIRP-212ENST00000613856 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
SLIRP-212ENST00000613856 IGF1RP08069 1367 aa18.88■□□□□ 0.61
SLIRP-212ENST00000613856 CUL7Q14999 1698 aa18.87■□□□□ 0.61
SLIRP-212ENST00000613856 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
SLIRP-212ENST00000613856 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
SLIRP-212ENST00000613856 PTPRGP23470 1445 aa18.83■□□□□ 0.61
SLIRP-212ENST00000613856 ASXL2Q76L83 1435 aa18.83■□□□□ 0.61
SLIRP-212ENST00000613856 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
SLIRP-212ENST00000613856 GLI2P10070 1586 aa18.79■□□□□ 0.6
SLIRP-212ENST00000613856 KIF21BO75037 1637 aa18.78■□□□□ 0.6
SLIRP-212ENST00000613856 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.6
SLIRP-212ENST00000613856 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
SLIRP-212ENST00000613856 FAM9AQ8IZU1 332 aaPredicted RBP18.75■□□□□ 0.59
SLIRP-212ENST00000613856 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
SLIRP-212ENST00000613856 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
SLIRP-212ENST00000613856 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
SLIRP-212ENST00000613856 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
SLIRP-212ENST00000613856 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
SLIRP-212ENST00000613856 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
SLIRP-212ENST00000613856 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
SLIRP-212ENST00000613856 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
SLIRP-212ENST00000613856 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
SLIRP-212ENST00000613856 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.58
SLIRP-212ENST00000613856 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
SLIRP-212ENST00000613856 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
SLIRP-212ENST00000613856 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
SLIRP-212ENST00000613856 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
SLIRP-212ENST00000613856 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
SLIRP-212ENST00000613856 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
SLIRP-212ENST00000613856 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
SLIRP-212ENST00000613856 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.57
SLIRP-212ENST00000613856 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
SLIRP-212ENST00000613856 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
SLIRP-212ENST00000613856 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
SLIRP-212ENST00000613856 CTTNBP2Q8WZ74 1663 aa18.49■□□□□ 0.55
SLIRP-212ENST00000613856 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
SLIRP-212ENST00000613856 CD109Q6YHK3 1445 aa18.47■□□□□ 0.55
SLIRP-212ENST00000613856 ABCA8O94911 1581 aa18.47■□□□□ 0.55
SLIRP-212ENST00000613856 KCNH8Q96L42 1107 aa18.45■□□□□ 0.54
SLIRP-212ENST00000613856 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
SLIRP-212ENST00000613856 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
SLIRP-212ENST00000613856 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
SLIRP-212ENST00000613856 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
SLIRP-212ENST00000613856 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
SLIRP-212ENST00000613856 FBXO41Q8TF61 875 aa18.35■□□□□ 0.53
SLIRP-212ENST00000613856 PTPRMP28827 1452 aa18.34■□□□□ 0.53
SLIRP-212ENST00000613856 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
SLIRP-212ENST00000613856 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
SLIRP-212ENST00000613856 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
SLIRP-212ENST00000613856 CLIP1P30622 1438 aa18.3■□□□□ 0.52
SLIRP-212ENST00000613856 ATP10BO94823 1461 aa18.29■□□□□ 0.52
SLIRP-212ENST00000613856 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
SLIRP-212ENST00000613856 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
SLIRP-212ENST00000613856 EFCAB5A4FU69 1503 aa18.28■□□□□ 0.52
SLIRP-212ENST00000613856 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
SLIRP-212ENST00000613856 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
SLIRP-212ENST00000613856 SAMD9Q5K651 1589 aa18.26■□□□□ 0.51
SLIRP-212ENST00000613856 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
SLIRP-212ENST00000613856 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
SLIRP-212ENST00000613856 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
SLIRP-212ENST00000613856 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
SLIRP-212ENST00000613856 SIGLEC1Q9BZZ2 1709 aa18.22■□□□□ 0.51
SLIRP-212ENST00000613856 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
SLIRP-212ENST00000613856 NEO1Q92859 1461 aa18.16■□□□□ 0.5
SLIRP-212ENST00000613856 RICTORQ6R327 1708 aa18.16■□□□□ 0.5
SLIRP-212ENST00000613856 HSPA2P54652 639 aa18.16■□□□□ 0.5
SLIRP-212ENST00000613856 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
SLIRP-212ENST00000613856 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
SLIRP-212ENST00000613856 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
SLIRP-212ENST00000613856 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
SLIRP-212ENST00000613856 NUP153P49790 1475 aaKnown RBP18.12■□□□□ 0.49
SLIRP-212ENST00000613856 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
SLIRP-212ENST00000613856 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
SLIRP-212ENST00000613856 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
SLIRP-212ENST00000613856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
SLIRP-212ENST00000613856 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
SLIRP-212ENST00000613856 YEATS2Q9ULM3 1422 aa18.07■□□□□ 0.48
SLIRP-212ENST00000613856 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
SLIRP-212ENST00000613856 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
SLIRP-212ENST00000613856 DENND4BO75064 1496 aaPredicted RBP18.05■□□□□ 0.48
SLIRP-212ENST00000613856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.48
SLIRP-212ENST00000613856 FER1L4A9Z1Z3 1794 aa18.04■□□□□ 0.48
SLIRP-212ENST00000613856 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
SLIRP-212ENST00000613856 FANCAO15360 1455 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms