RNA–Protein interactions for RNA: ENST00000613315.4

UBAP2L-220, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 2 BASIC

Gene UBAP2L, Length 3,451 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-220ENST00000613315 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
UBAP2L-220ENST00000613315 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
UBAP2L-220ENST00000613315 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
UBAP2L-220ENST00000613315 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
UBAP2L-220ENST00000613315 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.39
UBAP2L-220ENST00000613315 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
UBAP2L-220ENST00000613315 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
UBAP2L-220ENST00000613315 SETD5Q9C0A6 1442 aa12.53□□□□□ -0.4
UBAP2L-220ENST00000613315 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
UBAP2L-220ENST00000613315 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
UBAP2L-220ENST00000613315 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
UBAP2L-220ENST00000613315 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
UBAP2L-220ENST00000613315 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
UBAP2L-220ENST00000613315 ANP32CO43423 234 aa12.51□□□□□ -0.41
UBAP2L-220ENST00000613315 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
UBAP2L-220ENST00000613315 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
UBAP2L-220ENST00000613315 CDK11AQ9UQ88 783 aaPredicted RBP12.5□□□□□ -0.41
UBAP2L-220ENST00000613315 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
UBAP2L-220ENST00000613315 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
UBAP2L-220ENST00000613315 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
UBAP2L-220ENST00000613315 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
UBAP2L-220ENST00000613315 P3H3Q8IVL6 736 aa12.46□□□□□ -0.42
UBAP2L-220ENST00000613315 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
UBAP2L-220ENST00000613315 DEKP35659 375 aaKnown RBP12.41□□□□□ -0.42
UBAP2L-220ENST00000613315 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
UBAP2L-220ENST00000613315 KIF27Q86VH2 1401 aa12.41□□□□□ -0.42
UBAP2L-220ENST00000613315 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
UBAP2L-220ENST00000613315 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
UBAP2L-220ENST00000613315 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
UBAP2L-220ENST00000613315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■□□ 19.2
UBAP2L-220ENST00000613315 CUX1P39880 1505 aa12.36□□□□□ -0.43
UBAP2L-220ENST00000613315 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBAP2L-220ENST00000613315 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
UBAP2L-220ENST00000613315 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
UBAP2L-220ENST00000613315 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
UBAP2L-220ENST00000613315 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
UBAP2L-220ENST00000613315 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
UBAP2L-220ENST00000613315 UACAQ9BZF9 1416 aa12.27□□□□□ -0.44
UBAP2L-220ENST00000613315 PRDM2Q13029 1718 aa12.27□□□□□ -0.44
UBAP2L-220ENST00000613315 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
UBAP2L-220ENST00000613315 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
UBAP2L-220ENST00000613315 NBR1Q14596 966 aa12.25□□□□□ -0.45
UBAP2L-220ENST00000613315 CCDC18Q5T9S5 1454 aa12.25□□□□□ -0.45
UBAP2L-220ENST00000613315 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
UBAP2L-220ENST00000613315 IGF1RP08069 1367 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 CFTRP13569 1480 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
UBAP2L-220ENST00000613315 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
UBAP2L-220ENST00000613315 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
UBAP2L-220ENST00000613315 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.453e-7■■■■■ 28.7
UBAP2L-220ENST00000613315 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
UBAP2L-220ENST00000613315 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
UBAP2L-220ENST00000613315 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
UBAP2L-220ENST00000613315 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
UBAP2L-220ENST00000613315 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
UBAP2L-220ENST00000613315 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
UBAP2L-220ENST00000613315 POLR3GLQ9BT43 218 aa12.17□□□□□ -0.46
UBAP2L-220ENST00000613315 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
UBAP2L-220ENST00000613315 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
UBAP2L-220ENST00000613315 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
UBAP2L-220ENST00000613315 EFCAB5A4FU69 1503 aa12.17□□□□□ -0.46
UBAP2L-220ENST00000613315 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 NAIPQ13075 1403 aa12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
UBAP2L-220ENST00000613315 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
UBAP2L-220ENST00000613315 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
UBAP2L-220ENST00000613315 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
UBAP2L-220ENST00000613315 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
UBAP2L-220ENST00000613315 FOXD1Q16676 465 aa12.14□□□□□ -0.47
UBAP2L-220ENST00000613315 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
UBAP2L-220ENST00000613315 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
UBAP2L-220ENST00000613315 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBAP2L-220ENST00000613315 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
UBAP2L-220ENST00000613315 FMN1Q68DA7 1419 aa12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
UBAP2L-220ENST00000613315 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
UBAP2L-220ENST00000613315 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
UBAP2L-220ENST00000613315 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
UBAP2L-220ENST00000613315 GCC2Q8IWJ2 1684 aa12.09□□□□□ -0.47
UBAP2L-220ENST00000613315 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
UBAP2L-220ENST00000613315 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.47
UBAP2L-220ENST00000613315 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
UBAP2L-220ENST00000613315 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
UBAP2L-220ENST00000613315 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
UBAP2L-220ENST00000613315 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
UBAP2L-220ENST00000613315 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
UBAP2L-220ENST00000613315 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
UBAP2L-220ENST00000613315 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms