RNA–Protein interactions for RNA: ENST00000613315.4

UBAP2L-220, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 2 BASIC

Gene UBAP2L, Length 3,451 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-220ENST00000613315 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
UBAP2L-220ENST00000613315 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
UBAP2L-220ENST00000613315 HRCP23327 699 aa15.14■□□□□ 0.01
UBAP2L-220ENST00000613315 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
UBAP2L-220ENST00000613315 PPARGC1BQ86YN6 1023 aaKnown RBP14.84□□□□□ -0.03
UBAP2L-220ENST00000613315 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
UBAP2L-220ENST00000613315 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
UBAP2L-220ENST00000613315 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
UBAP2L-220ENST00000613315 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
UBAP2L-220ENST00000613315 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
UBAP2L-220ENST00000613315 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
UBAP2L-220ENST00000613315 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
UBAP2L-220ENST00000613315 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
UBAP2L-220ENST00000613315 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
UBAP2L-220ENST00000613315 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
UBAP2L-220ENST00000613315 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
UBAP2L-220ENST00000613315 ZEB1P37275 1124 aaPredicted RBP14.31□□□□□ -0.12
UBAP2L-220ENST00000613315 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
UBAP2L-220ENST00000613315 MYT1Q01538 1121 aa14.14□□□□□ -0.15
UBAP2L-220ENST00000613315 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
UBAP2L-220ENST00000613315 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
UBAP2L-220ENST00000613315 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
UBAP2L-220ENST00000613315 ABCC9O60706 1549 aa13.88□□□□□ -0.19
UBAP2L-220ENST00000613315 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
UBAP2L-220ENST00000613315 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
UBAP2L-220ENST00000613315 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
UBAP2L-220ENST00000613315 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
UBAP2L-220ENST00000613315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
UBAP2L-220ENST00000613315 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
UBAP2L-220ENST00000613315 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
UBAP2L-220ENST00000613315 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
UBAP2L-220ENST00000613315 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
UBAP2L-220ENST00000613315 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
UBAP2L-220ENST00000613315 NACADO15069 1562 aa13.59□□□□□ -0.23
UBAP2L-220ENST00000613315 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
UBAP2L-220ENST00000613315 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.26
UBAP2L-220ENST00000613315 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
UBAP2L-220ENST00000613315 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
UBAP2L-220ENST00000613315 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
UBAP2L-220ENST00000613315 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
UBAP2L-220ENST00000613315 RANGAP1P46060 587 aaPredicted RBP13.3□□□□□ -0.28
UBAP2L-220ENST00000613315 MIER1Q8N108 512 aa13.3□□□□□ -0.28
UBAP2L-220ENST00000613315 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
UBAP2L-220ENST00000613315 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
UBAP2L-220ENST00000613315 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
UBAP2L-220ENST00000613315 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.28
UBAP2L-220ENST00000613315 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.28
UBAP2L-220ENST00000613315 WIZO95785 1651 aa13.26□□□□□ -0.29
UBAP2L-220ENST00000613315 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
UBAP2L-220ENST00000613315 EEA1Q15075 1411 aa13.19□□□□□ -0.3
UBAP2L-220ENST00000613315 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
UBAP2L-220ENST00000613315 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
UBAP2L-220ENST00000613315 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
UBAP2L-220ENST00000613315 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
UBAP2L-220ENST00000613315 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
UBAP2L-220ENST00000613315 SOGA1O94964 1423 aa13.1□□□□□ -0.31
UBAP2L-220ENST00000613315 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
UBAP2L-220ENST00000613315 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
UBAP2L-220ENST00000613315 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
UBAP2L-220ENST00000613315 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
UBAP2L-220ENST00000613315 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
UBAP2L-220ENST00000613315 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
UBAP2L-220ENST00000613315 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
UBAP2L-220ENST00000613315 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
UBAP2L-220ENST00000613315 KIF21BO75037 1637 aa13□□□□□ -0.33
UBAP2L-220ENST00000613315 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
UBAP2L-220ENST00000613315 BCANQ96GW7 911 aa12.97□□□□□ -0.33
UBAP2L-220ENST00000613315 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
UBAP2L-220ENST00000613315 CLIP1P30622 1438 aa12.95□□□□□ -0.34
UBAP2L-220ENST00000613315 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
UBAP2L-220ENST00000613315 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
UBAP2L-220ENST00000613315 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
UBAP2L-220ENST00000613315 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
UBAP2L-220ENST00000613315 ITGAEP38570 1179 aa12.87□□□□□ -0.35
UBAP2L-220ENST00000613315 CUX2O14529 1486 aa12.85□□□□□ -0.35
UBAP2L-220ENST00000613315 APLP2Q06481 763 aa12.82□□□□□ -0.36
UBAP2L-220ENST00000613315 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
UBAP2L-220ENST00000613315 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
UBAP2L-220ENST00000613315 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
UBAP2L-220ENST00000613315 RBM19Q9Y4C8 960 aaKnown RBP12.78□□□□□ -0.36
UBAP2L-220ENST00000613315 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
UBAP2L-220ENST00000613315 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.36
UBAP2L-220ENST00000613315 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
UBAP2L-220ENST00000613315 FKBP8Q14318 412 aa12.74□□□□□ -0.37
UBAP2L-220ENST00000613315 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
UBAP2L-220ENST00000613315 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
UBAP2L-220ENST00000613315 MAPKBP1O60336 1514 aa12.68□□□□□ -0.38
UBAP2L-220ENST00000613315 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
UBAP2L-220ENST00000613315 NEFLP07196 543 aa12.67□□□□□ -0.38
UBAP2L-220ENST00000613315 MSH5O43196 834 aa12.66□□□□□ -0.38
UBAP2L-220ENST00000613315 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
UBAP2L-220ENST00000613315 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
UBAP2L-220ENST00000613315 KANK4Q5T7N3 995 aaPredicted RBP12.64□□□□□ -0.39
UBAP2L-220ENST00000613315 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
UBAP2L-220ENST00000613315 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
UBAP2L-220ENST00000613315 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
UBAP2L-220ENST00000613315 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
UBAP2L-220ENST00000613315 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
UBAP2L-220ENST00000613315 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
UBAP2L-220ENST00000613315 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms