RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
TSKU-205ENST00000612930 ANP32CO43423 234 aa23.32■■□□□ 1.32
TSKU-205ENST00000612930 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
TSKU-205ENST00000612930 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
TSKU-205ENST00000612930 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
TSKU-205ENST00000612930 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
TSKU-205ENST00000612930 TIMELESSQ9UNS1 1208 aa23.24■■□□□ 1.31
TSKU-205ENST00000612930 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
TSKU-205ENST00000612930 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
TSKU-205ENST00000612930 TIAM1Q13009 1591 aa23.2■■□□□ 1.3
TSKU-205ENST00000612930 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
TSKU-205ENST00000612930 MAP3K1Q13233 1512 aa23.16■■□□□ 1.3
TSKU-205ENST00000612930 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
TSKU-205ENST00000612930 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
TSKU-205ENST00000612930 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
TSKU-205ENST00000612930 CUX1P39880 1505 aa23.1■■□□□ 1.29
TSKU-205ENST00000612930 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
TSKU-205ENST00000612930 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
TSKU-205ENST00000612930 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
TSKU-205ENST00000612930 DEKP35659 375 aaKnown RBP23.05■■□□□ 1.28
TSKU-205ENST00000612930 ERICH6BQ5W0A0 696 aa23.01■■□□□ 1.27
TSKU-205ENST00000612930 PPP4R2Q9NY27 417 aa23■■□□□ 1.27
TSKU-205ENST00000612930 TONSLQ96HA7 1378 aa22.97■■□□□ 1.27
TSKU-205ENST00000612930 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
TSKU-205ENST00000612930 PRKCSHP14314 528 aaPredicted RBP22.95■■□□□ 1.26
TSKU-205ENST00000612930 IGF1RP08069 1367 aa22.88■■□□□ 1.25
TSKU-205ENST00000612930 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
TSKU-205ENST00000612930 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
TSKU-205ENST00000612930 PCF11O94913 1555 aaKnown RBP22.87■■□□□ 1.25
TSKU-205ENST00000612930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.254e-6■■■■■ 30.2
TSKU-205ENST00000612930 KDM5BQ9UGL1 1544 aa22.85■■□□□ 1.25
TSKU-205ENST00000612930 NOP58Q9Y2X3 529 aaKnown RBP22.85■■□□□ 1.25
TSKU-205ENST00000612930 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
TSKU-205ENST00000612930 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
TSKU-205ENST00000612930 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.24
TSKU-205ENST00000612930 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
TSKU-205ENST00000612930 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
TSKU-205ENST00000612930 NBR1Q14596 966 aa22.8■■□□□ 1.24
TSKU-205ENST00000612930 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
TSKU-205ENST00000612930 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
TSKU-205ENST00000612930 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
TSKU-205ENST00000612930 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
TSKU-205ENST00000612930 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
TSKU-205ENST00000612930 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
TSKU-205ENST00000612930 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
TSKU-205ENST00000612930 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
TSKU-205ENST00000612930 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
TSKU-205ENST00000612930 CFTRP13569 1480 aa22.72■■□□□ 1.23
TSKU-205ENST00000612930 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
TSKU-205ENST00000612930 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
TSKU-205ENST00000612930 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
TSKU-205ENST00000612930 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
TSKU-205ENST00000612930 FYCO1Q9BQS8 1478 aa22.69■■□□□ 1.22
TSKU-205ENST00000612930 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
TSKU-205ENST00000612930 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
TSKU-205ENST00000612930 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
TSKU-205ENST00000612930 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
TSKU-205ENST00000612930 NAIPQ13075 1403 aa22.66■■□□□ 1.22
TSKU-205ENST00000612930 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
TSKU-205ENST00000612930 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
TSKU-205ENST00000612930 MRS2Q9HD23 443 aa22.64■■□□□ 1.21
TSKU-205ENST00000612930 NCAPD3P42695 1498 aa22.64■■□□□ 1.21
TSKU-205ENST00000612930 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
TSKU-205ENST00000612930 EIF4G2P78344 907 aaKnown RBP eCLIP22.62■■□□□ 1.21
TSKU-205ENST00000612930 IPO9Q96P70 1041 aaKnown RBP22.61■■□□□ 1.21
TSKU-205ENST00000612930 CCDC7Q96M83 1385 aa22.58■■□□□ 1.2
TSKU-205ENST00000612930 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
TSKU-205ENST00000612930 ANP32AP39687 249 aaKnown RBP22.56■■□□□ 1.2
TSKU-205ENST00000612930 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
TSKU-205ENST00000612930 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
TSKU-205ENST00000612930 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
TSKU-205ENST00000612930 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
TSKU-205ENST00000612930 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
TSKU-205ENST00000612930 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
TSKU-205ENST00000612930 SMG6Q86US8 1419 aaKnown RBP22.53■■□□□ 1.2
TSKU-205ENST00000612930 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
TSKU-205ENST00000612930 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
TSKU-205ENST00000612930 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
TSKU-205ENST00000612930 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
TSKU-205ENST00000612930 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
TSKU-205ENST00000612930 IL27Q8NEV9 243 aa22.49■■□□□ 1.19
TSKU-205ENST00000612930 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
TSKU-205ENST00000612930 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
TSKU-205ENST00000612930 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
TSKU-205ENST00000612930 L3MBTL2Q969R5 705 aa22.46■■□□□ 1.19
TSKU-205ENST00000612930 NUDCQ9Y266 331 aa22.45■■□□□ 1.19
TSKU-205ENST00000612930 LRRIQ1Q96JM4 1722 aa22.44■■□□□ 1.18
TSKU-205ENST00000612930 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
TSKU-205ENST00000612930 KIF7Q2M1P5 1343 aa22.42■■□□□ 1.18
TSKU-205ENST00000612930 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
TSKU-205ENST00000612930 GCC2Q8IWJ2 1684 aa22.4■■□□□ 1.18
TSKU-205ENST00000612930 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
TSKU-205ENST00000612930 KDM6BO15054 1643 aa22.4■■□□□ 1.18
TSKU-205ENST00000612930 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.17
TSKU-205ENST00000612930 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
TSKU-205ENST00000612930 SUPT6HQ7KZ85 1726 aaKnown RBP22.37■■□□□ 1.17
TSKU-205ENST00000612930 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
TSKU-205ENST00000612930 RTN4Q9NQC3 1192 aaKnown RBP22.36■■□□□ 1.17
TSKU-205ENST00000612930 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
TSKU-205ENST00000612930 MPHOSPH9Q99550 1183 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms