RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
TSKU-205ENST00000612930 HRCP23327 699 aa28.09■■■□□ 2.09
TSKU-205ENST00000612930 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
TSKU-205ENST00000612930 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
TSKU-205ENST00000612930 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
TSKU-205ENST00000612930 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
TSKU-205ENST00000612930 PPARGC1BQ86YN6 1023 aaKnown RBP27.47■■□□□ 1.99
TSKU-205ENST00000612930 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
TSKU-205ENST00000612930 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
TSKU-205ENST00000612930 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
TSKU-205ENST00000612930 PELP1Q8IZL8 1130 aaKnown RBP26.84■■□□□ 1.89
TSKU-205ENST00000612930 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
TSKU-205ENST00000612930 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.87
TSKU-205ENST00000612930 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
TSKU-205ENST00000612930 SCAF1Q9H7N4 1312 aaKnown RBP26.49■■□□□ 1.83
TSKU-205ENST00000612930 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
TSKU-205ENST00000612930 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
TSKU-205ENST00000612930 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
TSKU-205ENST00000612930 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
TSKU-205ENST00000612930 ABCC9O60706 1549 aa25.77■■□□□ 1.72
TSKU-205ENST00000612930 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
TSKU-205ENST00000612930 MYT1Q01538 1121 aa25.74■■□□□ 1.71
TSKU-205ENST00000612930 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
TSKU-205ENST00000612930 GTF3C3Q9Y5Q9 886 aa25.63■■□□□ 1.69
TSKU-205ENST00000612930 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
TSKU-205ENST00000612930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
TSKU-205ENST00000612930 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
TSKU-205ENST00000612930 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
TSKU-205ENST00000612930 CENPBP07199 599 aaPredicted RBP25.5■■□□□ 1.67
TSKU-205ENST00000612930 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
TSKU-205ENST00000612930 CCER1Q8TC90 406 aaPredicted RBP25.47■■□□□ 1.67
TSKU-205ENST00000612930 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
TSKU-205ENST00000612930 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
TSKU-205ENST00000612930 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
TSKU-205ENST00000612930 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
TSKU-205ENST00000612930 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
TSKU-205ENST00000612930 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
TSKU-205ENST00000612930 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
TSKU-205ENST00000612930 MIER1Q8N108 512 aa24.86■■□□□ 1.57
TSKU-205ENST00000612930 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
TSKU-205ENST00000612930 WIZO95785 1651 aa24.84■■□□□ 1.57
TSKU-205ENST00000612930 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
TSKU-205ENST00000612930 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
TSKU-205ENST00000612930 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
TSKU-205ENST00000612930 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
TSKU-205ENST00000612930 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
TSKU-205ENST00000612930 SOGA1O94964 1423 aa24.55■■□□□ 1.52
TSKU-205ENST00000612930 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
TSKU-205ENST00000612930 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
TSKU-205ENST00000612930 NACADO15069 1562 aa24.44■■□□□ 1.5
TSKU-205ENST00000612930 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
TSKU-205ENST00000612930 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
TSKU-205ENST00000612930 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
TSKU-205ENST00000612930 CLSPNQ9HAW4 1339 aa24.42■■□□□ 1.5
TSKU-205ENST00000612930 EEA1Q15075 1411 aa24.4■■□□□ 1.5
TSKU-205ENST00000612930 GOLGA3Q08378 1498 aa24.35■■□□□ 1.49
TSKU-205ENST00000612930 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
TSKU-205ENST00000612930 TSHZ2Q9NRE2 1034 aa24.33■■□□□ 1.48
TSKU-205ENST00000612930 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
TSKU-205ENST00000612930 ANP32EQ9BTT0 268 aa24.29■■□□□ 1.48
TSKU-205ENST00000612930 CLIP1P30622 1438 aa24.14■■□□□ 1.45
TSKU-205ENST00000612930 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
TSKU-205ENST00000612930 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
TSKU-205ENST00000612930 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
TSKU-205ENST00000612930 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
TSKU-205ENST00000612930 KIF21BO75037 1637 aa24.09■■□□□ 1.45
TSKU-205ENST00000612930 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
TSKU-205ENST00000612930 APLP2Q06481 763 aa24.02■■□□□ 1.44
TSKU-205ENST00000612930 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
TSKU-205ENST00000612930 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
TSKU-205ENST00000612930 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
TSKU-205ENST00000612930 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.41
TSKU-205ENST00000612930 BCANQ96GW7 911 aa23.88■■□□□ 1.41
TSKU-205ENST00000612930 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
TSKU-205ENST00000612930 FKBP8Q14318 412 aa23.8■■□□□ 1.4
TSKU-205ENST00000612930 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
TSKU-205ENST00000612930 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
TSKU-205ENST00000612930 CUX2O14529 1486 aa23.72■■□□□ 1.39
TSKU-205ENST00000612930 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
TSKU-205ENST00000612930 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
TSKU-205ENST00000612930 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
TSKU-205ENST00000612930 MAPKBP1O60336 1514 aa23.58■■□□□ 1.37
TSKU-205ENST00000612930 DDX10Q13206 875 aaKnown RBP23.57■■□□□ 1.36
TSKU-205ENST00000612930 MSH5O43196 834 aa23.56■■□□□ 1.36
TSKU-205ENST00000612930 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
TSKU-205ENST00000612930 NEFLP07196 543 aa23.56■■□□□ 1.36
TSKU-205ENST00000612930 ITGAEP38570 1179 aa23.54■■□□□ 1.36
TSKU-205ENST00000612930 PEG3Q9GZU2 1588 aa23.54■■□□□ 1.36
TSKU-205ENST00000612930 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
TSKU-205ENST00000612930 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
TSKU-205ENST00000612930 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
TSKU-205ENST00000612930 PPP1R15AO75807 674 aaPredicted RBP23.49■■□□□ 1.35
TSKU-205ENST00000612930 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
TSKU-205ENST00000612930 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
TSKU-205ENST00000612930 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
TSKU-205ENST00000612930 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
TSKU-205ENST00000612930 SIN3AQ96ST3 1273 aa23.38■■□□□ 1.33
TSKU-205ENST00000612930 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
TSKU-205ENST00000612930 FANCIQ9NVI1 1328 aa23.36■■□□□ 1.33
TSKU-205ENST00000612930 SETD5Q9C0A6 1442 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms