RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 JPH4Q96JJ6 628 aa30.89■■■□□ 2.54
CSNK1E-215ENST00000612795 ABCC10Q5T3U5 1492 aa30.83■■■□□ 2.53
CSNK1E-215ENST00000612795 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
CSNK1E-215ENST00000612795 MAPKBP1O60336 1514 aa30.83■■■□□ 2.53
CSNK1E-215ENST00000612795 NPM1P06748 294 aaKnown RBP eCLIP30.8■■■□□ 2.52
CSNK1E-215ENST00000612795 FAM69CQ0P6D2 419 aa30.8■■■□□ 2.52
CSNK1E-215ENST00000612795 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
CSNK1E-215ENST00000612795 TSPOAP1O95153 1857 aa30.73■■■□□ 2.51
CSNK1E-215ENST00000612795 KDM6BO15054 1643 aa30.73■■■□□ 2.51
CSNK1E-215ENST00000612795 CUL7Q14999 1698 aa30.66■■■□□ 2.5
CSNK1E-215ENST00000612795 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
CSNK1E-215ENST00000612795 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
CSNK1E-215ENST00000612795 IGF1RP08069 1367 aa30.49■■■□□ 2.47
CSNK1E-215ENST00000612795 KDM4FA0A1W2PPD8 638 aa30.46■■■□□ 2.47
CSNK1E-215ENST00000612795 PTPRGP23470 1445 aa30.44■■■□□ 2.46
CSNK1E-215ENST00000612795 TTBK1Q5TCY1 1321 aaPredicted RBP30.42■■■□□ 2.46
CSNK1E-215ENST00000612795 ABCC2Q92887 1545 aa30.39■■■□□ 2.46
CSNK1E-215ENST00000612795 CARMIL2Q6F5E8 1435 aa30.39■■■□□ 2.45
CSNK1E-215ENST00000612795 PPRC1Q5VV67 1664 aaKnown RBP30.37■■■□□ 2.45
CSNK1E-215ENST00000612795 IQGAP2Q13576 1575 aa30.36■■■□□ 2.45
CSNK1E-215ENST00000612795 TNIKQ9UKE5 1360 aa30.35■■■□□ 2.45
CSNK1E-215ENST00000612795 GLI2P10070 1586 aa30.33■■■□□ 2.45
CSNK1E-215ENST00000612795 ASXL2Q76L83 1435 aa30.33■■■□□ 2.45
CSNK1E-215ENST00000612795 PLB1Q6P1J6 1458 aa30.32■■■□□ 2.44
CSNK1E-215ENST00000612795 CARMIL1Q5VZK9 1371 aa30.32■■■□□ 2.44
CSNK1E-215ENST00000612795 UHRF1BP1LA0JNW5 1464 aa30.25■■■□□ 2.43
CSNK1E-215ENST00000612795 ADGRL1O94910 1474 aa30.22■■■□□ 2.43
CSNK1E-215ENST00000612795 MAP3K4Q9Y6R4 1608 aa30.21■■■□□ 2.43
CSNK1E-215ENST00000612795 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
CSNK1E-215ENST00000612795 DISP1Q96F81 1524 aa30.17■■■□□ 2.42
CSNK1E-215ENST00000612795 ZCCHC11Q5TAX3 1644 aaKnown RBP30.17■■■□□ 2.42
CSNK1E-215ENST00000612795 EPRSP07814 1512 aaKnown RBP30.15■■■□□ 2.42
CSNK1E-215ENST00000612795 TEX14Q8IWB6 1497 aa30.12■■■□□ 2.41
CSNK1E-215ENST00000612795 KDM5BQ9UGL1 1544 aa30.12■■■□□ 2.41
CSNK1E-215ENST00000612795 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
CSNK1E-215ENST00000612795 ILDR1Q86SU0 546 aaPredicted RBP30.09■■■□□ 2.41
CSNK1E-215ENST00000612795 UGGT2Q9NYU1 1516 aa30.09■■■□□ 2.41
CSNK1E-215ENST00000612795 COL17A1Q9UMD9 1497 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-215ENST00000612795 RAPGEF2Q9Y4G8 1499 aa30.03■■■□□ 2.4
CSNK1E-215ENST00000612795 HECW2Q9P2P5 1572 aa30.01■■■□□ 2.39
CSNK1E-215ENST00000612795 CTTNBP2Q8WZ74 1663 aa29.99■■■□□ 2.39
CSNK1E-215ENST00000612795 WDR7Q9Y4E6 1490 aa29.98■■■□□ 2.39
CSNK1E-215ENST00000612795 CFAP43Q8NDM7 1665 aa29.93■■■□□ 2.38
CSNK1E-215ENST00000612795 MAGI3Q5TCQ9 1506 aa29.82■■■□□ 2.36
CSNK1E-215ENST00000612795 GOLGA3Q08378 1498 aa29.82■■■□□ 2.36
CSNK1E-215ENST00000612795 CD109Q6YHK3 1445 aa29.81■■■□□ 2.36
CSNK1E-215ENST00000612795 ABCA8O94911 1581 aa29.81■■■□□ 2.36
CSNK1E-215ENST00000612795 KIF21BO75037 1637 aa29.78■■■□□ 2.36
CSNK1E-215ENST00000612795 KCNH8Q96L42 1107 aa29.74■■■□□ 2.35
CSNK1E-215ENST00000612795 ARAP3Q8WWN8 1544 aa29.61■■■□□ 2.33
CSNK1E-215ENST00000612795 ABCA9Q8IUA7 1624 aa29.56■■■□□ 2.32
CSNK1E-215ENST00000612795 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
CSNK1E-215ENST00000612795 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
CSNK1E-215ENST00000612795 ARID3CA6NKF2 412 aa29.53■■■□□ 2.32
CSNK1E-215ENST00000612795 ADAMTSL3P82987 1691 aa29.5■■■□□ 2.31
CSNK1E-215ENST00000612795 ATP10BO94823 1461 aa29.49■■■□□ 2.31
CSNK1E-215ENST00000612795 PHLDB1Q86UU1 1377 aa29.46■■■□□ 2.31
CSNK1E-215ENST00000612795 PTPRMP28827 1452 aa29.46■■■□□ 2.31
CSNK1E-215ENST00000612795 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.3
CSNK1E-215ENST00000612795 P3H3Q8IVL6 736 aa29.44■■■□□ 2.3
CSNK1E-215ENST00000612795 SAMD9Q5K651 1589 aa29.43■■■□□ 2.3
CSNK1E-215ENST00000612795 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
CSNK1E-215ENST00000612795 NEO1Q92859 1461 aa29.41■■■□□ 2.3
CSNK1E-215ENST00000612795 MADDQ8WXG6 1647 aa29.39■■■□□ 2.3
CSNK1E-215ENST00000612795 FBXO41Q8TF61 875 aa29.39■■■□□ 2.3
CSNK1E-215ENST00000612795 FRMPD1Q5SYB0 1578 aa29.39■■■□□ 2.29
CSNK1E-215ENST00000612795 RAPGEF3O95398 923 aa29.36■■■□□ 2.29
CSNK1E-215ENST00000612795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.33■■■□□ 2.29
CSNK1E-215ENST00000612795 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
CSNK1E-215ENST00000612795 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
CSNK1E-215ENST00000612795 ARID4BQ4LE39 1312 aaPredicted RBP29.31■■■□□ 2.28
CSNK1E-215ENST00000612795 RIMS1Q86UR5 1692 aaKnown RBP29.31■■■□□ 2.28
CSNK1E-215ENST00000612795 ARHGEF40Q8TER5 1519 aa29.3■■■□□ 2.28
CSNK1E-215ENST00000612795 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
CSNK1E-215ENST00000612795 CFAP74Q9C0B2 1584 aa29.26■■■□□ 2.27
CSNK1E-215ENST00000612795 NUP153P49790 1475 aaKnown RBP29.25■■■□□ 2.27
CSNK1E-215ENST00000612795 LMTK3Q96Q04 1460 aa29.24■■■□□ 2.27
CSNK1E-215ENST00000612795 DENND4BO75064 1496 aaPredicted RBP29.19■■■□□ 2.26
CSNK1E-215ENST00000612795 FHOD3Q2V2M9 1422 aa29.16■■■□□ 2.26
CSNK1E-215ENST00000612795 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
CSNK1E-215ENST00000612795 FANCAO15360 1455 aa29.15■■■□□ 2.26
CSNK1E-215ENST00000612795 AKNAQ7Z591 1439 aa29.13■■■□□ 2.25
CSNK1E-215ENST00000612795 RANGAP1P46060 587 aaPredicted RBP29.13■■■□□ 2.25
CSNK1E-215ENST00000612795 ZMYM4Q5VZL5 1548 aa29.12■■■□□ 2.25
CSNK1E-215ENST00000612795 TTC37Q6PGP7 1564 aa29.12■■■□□ 2.25
CSNK1E-215ENST00000612795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
CSNK1E-215ENST00000612795 POGZQ7Z3K3 1410 aa29.11■■■□□ 2.25
CSNK1E-215ENST00000612795 EFCAB5A4FU69 1503 aa29.1■■■□□ 2.25
CSNK1E-215ENST00000612795 PLEKHD1A6NEE1 506 aa29.1■■■□□ 2.25
CSNK1E-215ENST00000612795 ZFYVE16Q7Z3T8 1539 aa29.1■■■□□ 2.25
CSNK1E-215ENST00000612795 FER1L4A9Z1Z3 1794 aa29.09■■■□□ 2.25
CSNK1E-215ENST00000612795 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
CSNK1E-215ENST00000612795 PLPPR3Q6T4P5 718 aa29.07■■■□□ 2.24
CSNK1E-215ENST00000612795 HSPA2P54652 639 aa29.02■■■□□ 2.24
CSNK1E-215ENST00000612795 EEA1Q15075 1411 aa29.01■■■□□ 2.23
CSNK1E-215ENST00000612795 YEATS2Q9ULM3 1422 aa29.01■■■□□ 2.23
CSNK1E-215ENST00000612795 HECW1Q76N89 1606 aa29.01■■■□□ 2.23
CSNK1E-215ENST00000612795 MAGI2Q86UL8 1455 aa28.99■■■□□ 2.23
CSNK1E-215ENST00000612795 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-215ENST00000612795 MLECQ14165 292 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms