RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
MUC1-225ENST00000612778 CTTNBP2Q8WZ74 1663 aa21.86■■□□□ 1.09
MUC1-225ENST00000612778 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
MUC1-225ENST00000612778 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
MUC1-225ENST00000612778 NUP160Q12769 1436 aa21.78■■□□□ 1.08
MUC1-225ENST00000612778 CEP170Q5SW79 1584 aa21.77■■□□□ 1.08
MUC1-225ENST00000612778 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
MUC1-225ENST00000612778 IQGAP2Q13576 1575 aa21.76■■□□□ 1.07
MUC1-225ENST00000612778 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
MUC1-225ENST00000612778 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
MUC1-225ENST00000612778 CHD1O14646 1710 aa21.72■■□□□ 1.07
MUC1-225ENST00000612778 EFCAB5A4FU69 1503 aa21.71■■□□□ 1.07
MUC1-225ENST00000612778 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
MUC1-225ENST00000612778 FHOD3Q2V2M9 1422 aa21.67■■□□□ 1.06
MUC1-225ENST00000612778 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
MUC1-225ENST00000612778 UGGT2Q9NYU1 1516 aa21.66■■□□□ 1.06
MUC1-225ENST00000612778 JPH4Q96JJ6 628 aa21.64■■□□□ 1.06
MUC1-225ENST00000612778 DISP1Q96F81 1524 aa21.59■■□□□ 1.05
MUC1-225ENST00000612778 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
MUC1-225ENST00000612778 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
MUC1-225ENST00000612778 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
MUC1-225ENST00000612778 APLP2Q06481 763 aa21.52■■□□□ 1.04
MUC1-225ENST00000612778 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
MUC1-225ENST00000612778 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
MUC1-225ENST00000612778 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
MUC1-225ENST00000612778 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
MUC1-225ENST00000612778 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
MUC1-225ENST00000612778 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
MUC1-225ENST00000612778 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
MUC1-225ENST00000612778 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
MUC1-225ENST00000612778 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
MUC1-225ENST00000612778 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
MUC1-225ENST00000612778 KANK4Q5T7N3 995 aaPredicted RBP21.39■■□□□ 1.01
MUC1-225ENST00000612778 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
MUC1-225ENST00000612778 MAP3K1Q13233 1512 aa21.37■■□□□ 1.01
MUC1-225ENST00000612778 PTPRGP23470 1445 aa21.35■■□□□ 1.01
MUC1-225ENST00000612778 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
MUC1-225ENST00000612778 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
MUC1-225ENST00000612778 PLB1Q6P1J6 1458 aa21.33■■□□□ 1.01
MUC1-225ENST00000612778 HECW1Q76N89 1606 aa21.31■■□□□ 1
MUC1-225ENST00000612778 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
MUC1-225ENST00000612778 ARID3CA6NKF2 412 aa21.28■■□□□ 1
MUC1-225ENST00000612778 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
MUC1-225ENST00000612778 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
MUC1-225ENST00000612778 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
MUC1-225ENST00000612778 LRRC9Q6ZRR7 1453 aa21.28■■□□□ 1
MUC1-225ENST00000612778 EPRSP07814 1512 aaKnown RBP21.27■■□□□ 1
MUC1-225ENST00000612778 LRRIQ1Q96JM4 1722 aa21.27■■□□□ 1
MUC1-225ENST00000612778 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
MUC1-225ENST00000612778 ABCA8O94911 1581 aa21.26■□□□□ 0.99
MUC1-225ENST00000612778 CDK13Q14004 1512 aaKnown RBP21.23■□□□□ 0.99
MUC1-225ENST00000612778 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
MUC1-225ENST00000612778 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
MUC1-225ENST00000612778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
MUC1-225ENST00000612778 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
MUC1-225ENST00000612778 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
MUC1-225ENST00000612778 ATP10BO94823 1461 aa21.15■□□□□ 0.98
MUC1-225ENST00000612778 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
MUC1-225ENST00000612778 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
MUC1-225ENST00000612778 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
MUC1-225ENST00000612778 UHRF1BP1LA0JNW5 1464 aa21.1■□□□□ 0.97
MUC1-225ENST00000612778 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
MUC1-225ENST00000612778 ARHGEF11O15085 1522 aa21.08■□□□□ 0.97
MUC1-225ENST00000612778 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
MUC1-225ENST00000612778 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
MUC1-225ENST00000612778 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
MUC1-225ENST00000612778 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
MUC1-225ENST00000612778 SUPT6HQ7KZ85 1726 aaKnown RBP21.03■□□□□ 0.96
MUC1-225ENST00000612778 KDM5BQ9UGL1 1544 aa21.02■□□□□ 0.95
MUC1-225ENST00000612778 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
MUC1-225ENST00000612778 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
MUC1-225ENST00000612778 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
MUC1-225ENST00000612778 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
MUC1-225ENST00000612778 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
MUC1-225ENST00000612778 MYOM3Q5VTT5 1437 aa20.97■□□□□ 0.95
MUC1-225ENST00000612778 ZCCHC11Q5TAX3 1644 aaKnown RBP20.96■□□□□ 0.95
MUC1-225ENST00000612778 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
MUC1-225ENST00000612778 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
MUC1-225ENST00000612778 KIF14Q15058 1648 aa20.93■□□□□ 0.94
MUC1-225ENST00000612778 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
MUC1-225ENST00000612778 NPM1P06748 294 aaKnown RBP eCLIP20.9■□□□□ 0.94
MUC1-225ENST00000612778 ABCC10Q5T3U5 1492 aa20.88■□□□□ 0.93
MUC1-225ENST00000612778 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
MUC1-225ENST00000612778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.87■□□□□ 0.93
MUC1-225ENST00000612778 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
MUC1-225ENST00000612778 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
MUC1-225ENST00000612778 ITGAEP38570 1179 aa20.85■□□□□ 0.93
MUC1-225ENST00000612778 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.92
MUC1-225ENST00000612778 ASXL2Q76L83 1435 aa20.83■□□□□ 0.92
MUC1-225ENST00000612778 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.92
MUC1-225ENST00000612778 PTPN23Q9H3S7 1636 aa20.82■□□□□ 0.92
MUC1-225ENST00000612778 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
MUC1-225ENST00000612778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.8■□□□□ 0.92
MUC1-225ENST00000612778 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
MUC1-225ENST00000612778 TTC37Q6PGP7 1564 aa20.77■□□□□ 0.92
MUC1-225ENST00000612778 ITSN2Q9NZM3 1697 aa20.77■□□□□ 0.91
MUC1-225ENST00000612778 ZNF777Q9ULD5 760 aaPredicted RBP20.76■□□□□ 0.91
MUC1-225ENST00000612778 CDC42BPAQ5VT25 1732 aa20.75■□□□□ 0.91
MUC1-225ENST00000612778 PTPRKQ15262 1439 aa20.72■□□□□ 0.91
MUC1-225ENST00000612778 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms