RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-213ENST00000611963 FBLN2P98095 1184 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
TARDBP-213ENST00000611963 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
TARDBP-213ENST00000611963 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
TARDBP-213ENST00000611963 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
TARDBP-213ENST00000611963 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
TARDBP-213ENST00000611963 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
TARDBP-213ENST00000611963 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-213ENST00000611963 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
TARDBP-213ENST00000611963 KIF21BO75037 1637 aa13.14□□□□□ -0.31
TARDBP-213ENST00000611963 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
TARDBP-213ENST00000611963 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
TARDBP-213ENST00000611963 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
TARDBP-213ENST00000611963 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
TARDBP-213ENST00000611963 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
TARDBP-213ENST00000611963 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
TARDBP-213ENST00000611963 IGF1RP08069 1367 aa13.09□□□□□ -0.31
TARDBP-213ENST00000611963 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
TARDBP-213ENST00000611963 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
TARDBP-213ENST00000611963 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
TARDBP-213ENST00000611963 NUP160Q12769 1436 aa13.07□□□□□ -0.32
TARDBP-213ENST00000611963 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
TARDBP-213ENST00000611963 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
TARDBP-213ENST00000611963 CUL7Q14999 1698 aa13.04□□□□□ -0.32
TARDBP-213ENST00000611963 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
TARDBP-213ENST00000611963 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
TARDBP-213ENST00000611963 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
TARDBP-213ENST00000611963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.332e-9■■□□□ 12.6
TARDBP-213ENST00000611963 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
TARDBP-213ENST00000611963 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
TARDBP-213ENST00000611963 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
TARDBP-213ENST00000611963 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
TARDBP-213ENST00000611963 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
TARDBP-213ENST00000611963 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
TARDBP-213ENST00000611963 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-213ENST00000611963 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
TARDBP-213ENST00000611963 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-213ENST00000611963 CLIP1P30622 1438 aa12.89□□□□□ -0.35
TARDBP-213ENST00000611963 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
TARDBP-213ENST00000611963 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
TARDBP-213ENST00000611963 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
TARDBP-213ENST00000611963 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-213ENST00000611963 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-213ENST00000611963 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
TARDBP-213ENST00000611963 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
TARDBP-213ENST00000611963 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
TARDBP-213ENST00000611963 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
TARDBP-213ENST00000611963 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
TARDBP-213ENST00000611963 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
TARDBP-213ENST00000611963 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
TARDBP-213ENST00000611963 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
TARDBP-213ENST00000611963 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
TARDBP-213ENST00000611963 PTPRGP23470 1445 aa12.71□□□□□ -0.37
TARDBP-213ENST00000611963 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.37
TARDBP-213ENST00000611963 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
TARDBP-213ENST00000611963 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
TARDBP-213ENST00000611963 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
TARDBP-213ENST00000611963 ZBTB22O15209 634 aa12.69□□□□□ -0.38
TARDBP-213ENST00000611963 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
TARDBP-213ENST00000611963 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
TARDBP-213ENST00000611963 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
TARDBP-213ENST00000611963 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-213ENST00000611963 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
TARDBP-213ENST00000611963 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
TARDBP-213ENST00000611963 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
TARDBP-213ENST00000611963 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
TARDBP-213ENST00000611963 UACAQ9BZF9 1416 aa12.63□□□□□ -0.39
TARDBP-213ENST00000611963 ABCC2Q92887 1545 aa12.63□□□□□ -0.39
TARDBP-213ENST00000611963 FAM69CQ0P6D2 419 aa12.61□□□□□ -0.39
TARDBP-213ENST00000611963 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
TARDBP-213ENST00000611963 LRRIQ1Q96JM4 1722 aa12.59□□□□□ -0.39
TARDBP-213ENST00000611963 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
TARDBP-213ENST00000611963 KDM5BQ9UGL1 1544 aa12.59□□□□□ -0.39
TARDBP-213ENST00000611963 APLP2Q06481 763 aa12.59□□□□□ -0.39
TARDBP-213ENST00000611963 CASKIN1Q8WXD9 1431 aa12.59□□□□□ -0.39
TARDBP-213ENST00000611963 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.4
TARDBP-213ENST00000611963 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
TARDBP-213ENST00000611963 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-213ENST00000611963 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
TARDBP-213ENST00000611963 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-213ENST00000611963 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
TARDBP-213ENST00000611963 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
TARDBP-213ENST00000611963 ABCA8O94911 1581 aa12.56□□□□□ -0.4
TARDBP-213ENST00000611963 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
TARDBP-213ENST00000611963 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
TARDBP-213ENST00000611963 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
TARDBP-213ENST00000611963 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
TARDBP-213ENST00000611963 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
TARDBP-213ENST00000611963 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-213ENST00000611963 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-213ENST00000611963 GLI2P10070 1586 aa12.52□□□□□ -0.4
TARDBP-213ENST00000611963 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
TARDBP-213ENST00000611963 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
TARDBP-213ENST00000611963 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
TARDBP-213ENST00000611963 CDK13Q14004 1512 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms