RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
TARDBP-213ENST00000611963 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
TARDBP-213ENST00000611963 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
TARDBP-213ENST00000611963 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
TARDBP-213ENST00000611963 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-213ENST00000611963 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
TARDBP-213ENST00000611963 FOXD1Q16676 465 aa16.41■□□□□ 0.22
TARDBP-213ENST00000611963 ABCC9O60706 1549 aa16.4■□□□□ 0.22
TARDBP-213ENST00000611963 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
TARDBP-213ENST00000611963 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
TARDBP-213ENST00000611963 ADRA2BP18089 450 aa15.68■□□□□ 0.1
TARDBP-213ENST00000611963 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
TARDBP-213ENST00000611963 NACADO15069 1562 aa15.62■□□□□ 0.09
TARDBP-213ENST00000611963 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
TARDBP-213ENST00000611963 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
TARDBP-213ENST00000611963 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
TARDBP-213ENST00000611963 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
TARDBP-213ENST00000611963 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
TARDBP-213ENST00000611963 UNC13AQ9UPW8 1703 aa15.34■□□□□ 0.05
TARDBP-213ENST00000611963 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
TARDBP-213ENST00000611963 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
TARDBP-213ENST00000611963 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
TARDBP-213ENST00000611963 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
TARDBP-213ENST00000611963 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
TARDBP-213ENST00000611963 MSH5O43196 834 aa15.04■□□□□ -0
TARDBP-213ENST00000611963 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
TARDBP-213ENST00000611963 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
TARDBP-213ENST00000611963 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
TARDBP-213ENST00000611963 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
TARDBP-213ENST00000611963 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
TARDBP-213ENST00000611963 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
TARDBP-213ENST00000611963 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
TARDBP-213ENST00000611963 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
TARDBP-213ENST00000611963 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
TARDBP-213ENST00000611963 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
TARDBP-213ENST00000611963 SMARCA2P51531 1590 aa14.36□□□□□ -0.11
TARDBP-213ENST00000611963 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
TARDBP-213ENST00000611963 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
TARDBP-213ENST00000611963 PEG3Q9GZU2 1588 aa14.31□□□□□ -0.12
TARDBP-213ENST00000611963 WIZO95785 1651 aa14.3□□□□□ -0.12
TARDBP-213ENST00000611963 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
TARDBP-213ENST00000611963 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
TARDBP-213ENST00000611963 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
TARDBP-213ENST00000611963 NESP48681 1621 aa14.16□□□□□ -0.14
TARDBP-213ENST00000611963 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
TARDBP-213ENST00000611963 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
TARDBP-213ENST00000611963 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
TARDBP-213ENST00000611963 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
TARDBP-213ENST00000611963 CUX2O14529 1486 aa14.04□□□□□ -0.16
TARDBP-213ENST00000611963 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
TARDBP-213ENST00000611963 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
TARDBP-213ENST00000611963 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
TARDBP-213ENST00000611963 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
TARDBP-213ENST00000611963 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
TARDBP-213ENST00000611963 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
TARDBP-213ENST00000611963 CFTRP13569 1480 aa13.89□□□□□ -0.19
TARDBP-213ENST00000611963 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
TARDBP-213ENST00000611963 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
TARDBP-213ENST00000611963 CEP164Q9UPV0 1460 aa13.82□□□□□ -0.2
TARDBP-213ENST00000611963 WDR62O43379 1518 aa13.82□□□□□ -0.2
TARDBP-213ENST00000611963 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
TARDBP-213ENST00000611963 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
TARDBP-213ENST00000611963 KCNA4P22459 653 aa13.74□□□□□ -0.21
TARDBP-213ENST00000611963 URB2Q14146 1524 aaKnown RBP13.73□□□□□ -0.21
TARDBP-213ENST00000611963 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
TARDBP-213ENST00000611963 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
TARDBP-213ENST00000611963 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
TARDBP-213ENST00000611963 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
TARDBP-213ENST00000611963 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
TARDBP-213ENST00000611963 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
TARDBP-213ENST00000611963 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-213ENST00000611963 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
TARDBP-213ENST00000611963 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
TARDBP-213ENST00000611963 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
TARDBP-213ENST00000611963 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
TARDBP-213ENST00000611963 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-213ENST00000611963 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
TARDBP-213ENST00000611963 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
TARDBP-213ENST00000611963 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-213ENST00000611963 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
TARDBP-213ENST00000611963 CUX1P39880 1505 aa13.48□□□□□ -0.25
TARDBP-213ENST00000611963 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
TARDBP-213ENST00000611963 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
TARDBP-213ENST00000611963 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
TARDBP-213ENST00000611963 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
TARDBP-213ENST00000611963 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.265e-11■■□□□ 14.4
TARDBP-213ENST00000611963 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
TARDBP-213ENST00000611963 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
TARDBP-213ENST00000611963 SOGA1O94964 1423 aa13.4□□□□□ -0.26
TARDBP-213ENST00000611963 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-213ENST00000611963 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
TARDBP-213ENST00000611963 RUSC2Q8N2Y8 1516 aa13.33□□□□□ -0.28
TARDBP-213ENST00000611963 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
TARDBP-213ENST00000611963 CHD1O14646 1710 aa13.3□□□□□ -0.28
TARDBP-213ENST00000611963 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
TARDBP-213ENST00000611963 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
TARDBP-213ENST00000611963 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
TARDBP-213ENST00000611963 GRIN2BQ13224 1484 aa13.27□□□□□ -0.29
TARDBP-213ENST00000611963 EEA1Q15075 1411 aa13.26□□□□□ -0.29
TARDBP-213ENST00000611963 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms