RNA–Protein interactions for RNA: ENST00000611786.4

ATRAID-208, Transcript of all-trans retinoic acid induced differentiation factor, human

TSL 1 (best) BASIC

Gene ATRAID, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRAID-208	ENST00000611786	PRX	Q9BXM0	1461 aa		33.94	■■■■□ 3.02
ATRAID-208	ENST00000611786	CSRNP3	Q8WYN3	585 aa		33.93	■■■■□ 3.02
ATRAID-208	ENST00000611786	KIAA0586	Q9BVV6	1533 aa		33.93	■■■■□ 3.02
ATRAID-208	ENST00000611786	JPH4	Q96JJ6	628 aa		33.87	■■■■□ 3.01
ATRAID-208	ENST00000611786	ARAP1	Q96P48	1450 aa		33.84	■■■■□ 3.01
ATRAID-208	ENST00000611786	ERCC6L2	Q5T890	1561 aa		33.79	■■■■□ 3
ATRAID-208	ENST00000611786	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.78	■■■■□ 3
ATRAID-208	ENST00000611786	CYB5RL	Q6IPT4	315 aa		33.77	■■■■□ 3
ATRAID-208	ENST00000611786	PRG4	Q92954	1404 aa	Predicted RBP	33.77	■■■■□ 3
ATRAID-208	ENST00000611786	IQGAP2	Q13576	1575 aa		33.74	■■■□□ 2.99
ATRAID-208	ENST00000611786	CTTNBP2	Q8WZ74	1663 aa		33.68	■■■□□ 2.98
ATRAID-208	ENST00000611786	KIF21B	O75037	1637 aa		33.64	■■■□□ 2.98
ATRAID-208	ENST00000611786	UGGT2	Q9NYU1	1516 aa		33.58	■■■□□ 2.97
ATRAID-208	ENST00000611786	CARMIL2	Q6F5E8	1435 aa		33.55	■■■□□ 2.96
ATRAID-208	ENST00000611786	DISP1	Q96F81	1524 aa		33.51	■■■□□ 2.95
ATRAID-208	ENST00000611786	TNIK	Q9UKE5	1360 aa		33.43	■■■□□ 2.94
ATRAID-208	ENST00000611786	GOLGA3	Q08378	1498 aa		33.43	■■■□□ 2.94
ATRAID-208	ENST00000611786	KIAA0556	O60303	1618 aa		33.42	■■■□□ 2.94
ATRAID-208	ENST00000611786	PTPRG	P23470	1445 aa		33.39	■■■□□ 2.94
ATRAID-208	ENST00000611786	UBTF	P17480	764 aa	Known RBP	33.31	■■■□□ 2.92
ATRAID-208	ENST00000611786	EHMT2	Q96KQ7	1210 aa		33.3	■■■□□ 2.92
ATRAID-208	ENST00000611786	SAMD9	Q5K651	1589 aa		33.27	■■■□□ 2.92
ATRAID-208	ENST00000611786	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.26	■■■□□ 2.91
ATRAID-208	ENST00000611786	ADCY10	Q96PN6	1610 aa		33.25	■■■□□ 2.91
ATRAID-208	ENST00000611786	UACA	Q9BZF9	1416 aa		33.19	■■■□□ 2.9
ATRAID-208	ENST00000611786	UHRF1BP1L	A0JNW5	1464 aa		33.17	■■■□□ 2.9
ATRAID-208	ENST00000611786	RANGAP1	P46060	587 aa	Predicted RBP	33.15	■■■□□ 2.9
ATRAID-208	ENST00000611786	P3H3	Q8IVL6	736 aa		33.15	■■■□□ 2.9
ATRAID-208	ENST00000611786	EFCAB5	A4FU69	1503 aa		33.14	■■■□□ 2.9
ATRAID-208	ENST00000611786	NPM1	P06748	294 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
ATRAID-208	ENST00000611786	ABCC2	Q92887	1545 aa		33.12	■■■□□ 2.89
ATRAID-208	ENST00000611786	PLB1	Q6P1J6	1458 aa		33.06	■■■□□ 2.88
ATRAID-208	ENST00000611786	ABCA8	O94911	1581 aa		33.06	■■■□□ 2.88
ATRAID-208	ENST00000611786	MAPKBP1	O60336	1514 aa		33.03	■■■□□ 2.88
ATRAID-208	ENST00000611786	FHOD3	Q2V2M9	1422 aa		33.02	■■■□□ 2.88
ATRAID-208	ENST00000611786	TRH	P20396	242 aa	Predicted RBP	33.01	■■■□□ 2.87
ATRAID-208	ENST00000611786	KDM5B	Q9UGL1	1544 aa		33	■■■□□ 2.87
ATRAID-208	ENST00000611786	ARHGAP35	Q9NRY4	1499 aa		32.99	■■■□□ 2.87
ATRAID-208	ENST00000611786	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.92	■■■□□ 2.86
ATRAID-208	ENST00000611786	RAPGEF6	Q8TEU7	1601 aa		32.91	■■■□□ 2.86
ATRAID-208	ENST00000611786	ASXL2	Q76L83	1435 aa		32.85	■■■□□ 2.85
ATRAID-208	ENST00000611786	ABCC10	Q5T3U5	1492 aa		32.85	■■■□□ 2.85
ATRAID-208	ENST00000611786	FMN1	Q68DA7	1419 aa		32.84	■■■□□ 2.85
ATRAID-208	ENST00000611786	KIF13A	Q9H1H9	1805 aa		32.84	■■■□□ 2.85
ATRAID-208	ENST00000611786	LOC105371045	A0A1W2PR82	267 aa		32.83	■■■□□ 2.85
ATRAID-208	ENST00000611786	CLIP1	P30622	1438 aa		32.83	■■■□□ 2.85
ATRAID-208	ENST00000611786	DIP2B	Q9P265	1576 aa		32.79	■■■□□ 2.84
ATRAID-208	ENST00000611786	ATP10B	O94823	1461 aa		32.79	■■■□□ 2.84
ATRAID-208	ENST00000611786	NUP153	P49790	1475 aa	Known RBP	32.79	■■■□□ 2.84
ATRAID-208	ENST00000611786	FAM69C	Q0P6D2	419 aa		32.75	■■■□□ 2.83
ATRAID-208	ENST00000611786	CEP162	Q5TB80	1403 aa		32.71	■■■□□ 2.83
ATRAID-208	ENST00000611786	ARID3C	A6NKF2	412 aa		32.71	■■■□□ 2.83
ATRAID-208	ENST00000611786	WDR7	Q9Y4E6	1490 aa		32.71	■■■□□ 2.83
ATRAID-208	ENST00000611786	GLI2	P10070	1586 aa		32.67	■■■□□ 2.82
ATRAID-208	ENST00000611786	EPRS	P07814	1512 aa	Known RBP	32.67	■■■□□ 2.82
ATRAID-208	ENST00000611786	HECW1	Q76N89	1606 aa		32.65	■■■□□ 2.82
ATRAID-208	ENST00000611786	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.61	■■■□□ 2.81
ATRAID-208	ENST00000611786	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.61	■■■□□ 2.81
ATRAID-208	ENST00000611786	CASKIN1	Q8WXD9	1431 aa		32.6	■■■□□ 2.81
ATRAID-208	ENST00000611786	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.57	■■■□□ 2.8
ATRAID-208	ENST00000611786	PCF11	O94913	1555 aa	Known RBP	32.56	■■■□□ 2.8
ATRAID-208	ENST00000611786	KCNH8	Q96L42	1107 aa		32.54	■■■□□ 2.8
ATRAID-208	ENST00000611786	CDK13	Q14004	1512 aa	Known RBP	32.54	■■■□□ 2.8
ATRAID-208	ENST00000611786	MAP3K4	Q9Y6R4	1608 aa		32.52	■■■□□ 2.8
ATRAID-208	ENST00000611786	PLEKHD1	A6NEE1	506 aa		32.52	■■■□□ 2.8
ATRAID-208	ENST00000611786	FYCO1	Q9BQS8	1478 aa		32.52	■■■□□ 2.8
ATRAID-208	ENST00000611786	LRRIQ1	Q96JM4	1722 aa		32.51	■■■□□ 2.79
ATRAID-208	ENST00000611786	TSPOAP1	O95153	1857 aa		32.5	■■■□□ 2.79
ATRAID-208	ENST00000611786	CFAP43	Q8NDM7	1665 aa		32.46	■■■□□ 2.79
ATRAID-208	ENST00000611786	CCDC18	Q5T9S5	1454 aa		32.45	■■■□□ 2.79
ATRAID-208	ENST00000611786	PPRC1	Q5VV67	1664 aa	Known RBP	32.44	■■■□□ 2.78
ATRAID-208	ENST00000611786	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.43	■■■□□ 2.78
ATRAID-208	ENST00000611786	ABCA9	Q8IUA7	1624 aa		32.4	■■■□□ 2.78
ATRAID-208	ENST00000611786	CD109	Q6YHK3	1445 aa		32.4	■■■□□ 2.78
ATRAID-208	ENST00000611786	MAGI3	Q5TCQ9	1506 aa		32.35	■■■□□ 2.77
ATRAID-208	ENST00000611786	TEX14	Q8IWB6	1497 aa		32.35	■■■□□ 2.77
ATRAID-208	ENST00000611786	VPS8	Q8N3P4	1428 aa		32.32	■■■□□ 2.76
ATRAID-208	ENST00000611786	TRO	Q12816	1431 aa	Predicted RBP	32.31	■■■□□ 2.76
ATRAID-208	ENST00000611786	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
ATRAID-208	ENST00000611786	TTC37	Q6PGP7	1564 aa		32.23	■■■□□ 2.75
ATRAID-208	ENST00000611786	KIF14	Q15058	1648 aa		32.22	■■■□□ 2.75
ATRAID-208	ENST00000611786	KDM6B	O15054	1643 aa		32.22	■■■□□ 2.75
ATRAID-208	ENST00000611786	PHLDB1	Q86UU1	1377 aa		32.14	■■■□□ 2.74
ATRAID-208	ENST00000611786	NEO1	Q92859	1461 aa		32.13	■■■□□ 2.73
ATRAID-208	ENST00000611786	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.11	■■■□□ 2.73
ATRAID-208	ENST00000611786	PLCH2	O75038	1416 aa		32.11	■■■□□ 2.73
ATRAID-208	ENST00000611786	MTUS2	Q5JR59	1369 aa		32.1	■■■□□ 2.73
ATRAID-208	ENST00000611786	MYO5C	Q9NQX4	1742 aa		32.1	■■■□□ 2.73
ATRAID-208	ENST00000611786	TIAM1	Q13009	1591 aa		32.1	■■■□□ 2.73
ATRAID-208	ENST00000611786	MAP3K1	Q13233	1512 aa		32.07	■■■□□ 2.72
ATRAID-208	ENST00000611786	ARAP3	Q8WWN8	1544 aa		32.07	■■■□□ 2.72
ATRAID-208	ENST00000611786	CFAP74	Q9C0B2	1584 aa		32.07	■■■□□ 2.72
ATRAID-208	ENST00000611786	FANCA	O15360	1455 aa		32.06	■■■□□ 2.72
ATRAID-208	ENST00000611786	EHBP1L1	Q8N3D4	1523 aa		32.05	■■■□□ 2.72
ATRAID-208	ENST00000611786	AKNA	Q7Z591	1439 aa		32	■■■□□ 2.71
ATRAID-208	ENST00000611786	CDC42BPB	Q9Y5S2	1711 aa		31.98	■■■□□ 2.71
ATRAID-208	ENST00000611786	PREX2	Q70Z35	1606 aa		31.97	■■■□□ 2.71
ATRAID-208	ENST00000611786	EFCAB2	Q5VUJ9	269 aa		31.97	■■■□□ 2.71
ATRAID-208	ENST00000611786	CDC42BPA	Q5VT25	1732 aa		31.97	■■■□□ 2.71
ATRAID-208	ENST00000611786	LRRC9	Q6ZRR7	1453 aa		31.97	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms