RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
SEMA3B-210ENST00000611067 RANGAP1P46060 587 aaPredicted RBP28.65■■■□□ 2.18
SEMA3B-210ENST00000611067 IFT140Q96RY7 1462 aa28.63■■■□□ 2.17
SEMA3B-210ENST00000611067 ZNF316A6NFI3 1004 aaPredicted RBP28.54■■■□□ 2.16
SEMA3B-210ENST00000611067 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
SEMA3B-210ENST00000611067 VPS8Q8N3P4 1428 aa28.53■■■□□ 2.16
SEMA3B-210ENST00000611067 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.165e-8■■■■□ 25.4
SEMA3B-210ENST00000611067 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
SEMA3B-210ENST00000611067 ZNF608Q9ULD9 1512 aaPredicted RBP28.46■■■□□ 2.15
SEMA3B-210ENST00000611067 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
SEMA3B-210ENST00000611067 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
SEMA3B-210ENST00000611067 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
SEMA3B-210ENST00000611067 ARHGAP35Q9NRY4 1499 aa28.41■■■□□ 2.14
SEMA3B-210ENST00000611067 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
SEMA3B-210ENST00000611067 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.13
SEMA3B-210ENST00000611067 ADAMTS12P58397 1594 aa28.38■■■□□ 2.13
SEMA3B-210ENST00000611067 APLP2Q06481 763 aa28.32■■■□□ 2.12
SEMA3B-210ENST00000611067 SNAPC4Q5SXM2 1469 aa28.26■■■□□ 2.11
SEMA3B-210ENST00000611067 EFCAB5A4FU69 1503 aa28.25■■■□□ 2.11
SEMA3B-210ENST00000611067 YTHDC1Q96MU7 727 aaKnown RBP28.21■■■□□ 2.11
SEMA3B-210ENST00000611067 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
SEMA3B-210ENST00000611067 MIER1Q8N108 512 aa28.18■■■□□ 2.1
SEMA3B-210ENST00000611067 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
SEMA3B-210ENST00000611067 FHOD3Q2V2M9 1422 aa28.12■■■□□ 2.09
SEMA3B-210ENST00000611067 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
SEMA3B-210ENST00000611067 IQGAP2Q13576 1575 aa28.12■■■□□ 2.09
SEMA3B-210ENST00000611067 SAMD9Q5K651 1589 aa28.1■■■□□ 2.09
SEMA3B-210ENST00000611067 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
SEMA3B-210ENST00000611067 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
SEMA3B-210ENST00000611067 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
SEMA3B-210ENST00000611067 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
SEMA3B-210ENST00000611067 PCF11O94913 1555 aaKnown RBP28.02■■■□□ 2.08
SEMA3B-210ENST00000611067 KIAA0586Q9BVV6 1533 aa28.01■■■□□ 2.07
SEMA3B-210ENST00000611067 FBLN2P98095 1184 aa27.99■■■□□ 2.07
SEMA3B-210ENST00000611067 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
SEMA3B-210ENST00000611067 FYCO1Q9BQS8 1478 aa27.97■■■□□ 2.07
SEMA3B-210ENST00000611067 TIAM1Q13009 1591 aa27.95■■■□□ 2.07
SEMA3B-210ENST00000611067 CASKIN1Q8WXD9 1431 aa27.95■■■□□ 2.06
SEMA3B-210ENST00000611067 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
SEMA3B-210ENST00000611067 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
SEMA3B-210ENST00000611067 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
SEMA3B-210ENST00000611067 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
SEMA3B-210ENST00000611067 CFAP43Q8NDM7 1665 aa27.89■■■□□ 2.05
SEMA3B-210ENST00000611067 NUP160Q12769 1436 aa27.88■■■□□ 2.05
SEMA3B-210ENST00000611067 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
SEMA3B-210ENST00000611067 LRRC9Q6ZRR7 1453 aa27.82■■■□□ 2.04
SEMA3B-210ENST00000611067 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
SEMA3B-210ENST00000611067 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
SEMA3B-210ENST00000611067 CHD1O14646 1710 aa27.76■■■□□ 2.03
SEMA3B-210ENST00000611067 HECW1Q76N89 1606 aa27.72■■■□□ 2.03
SEMA3B-210ENST00000611067 JPH4Q96JJ6 628 aa27.7■■■□□ 2.02
SEMA3B-210ENST00000611067 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.02
SEMA3B-210ENST00000611067 CARMIL2Q6F5E8 1435 aa27.69■■■□□ 2.02
SEMA3B-210ENST00000611067 CCDC18Q5T9S5 1454 aa27.67■■■□□ 2.02
SEMA3B-210ENST00000611067 RRBP1Q9P2E9 1410 aaKnown RBP27.67■■■□□ 2.02
SEMA3B-210ENST00000611067 DHX57Q6P158 1386 aaKnown RBP27.67■■■□□ 2.02
SEMA3B-210ENST00000611067 MTUS2Q5JR59 1369 aa27.63■■■□□ 2.01
SEMA3B-210ENST00000611067 SUPT16HQ9Y5B9 1047 aaKnown RBP27.62■■■□□ 2.01
SEMA3B-210ENST00000611067 CCNB3Q8WWL7 1395 aa27.61■■■□□ 2.01
SEMA3B-210ENST00000611067 EPRSP07814 1512 aaKnown RBP27.58■■■□□ 2.01
SEMA3B-210ENST00000611067 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
SEMA3B-210ENST00000611067 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
SEMA3B-210ENST00000611067 EHBP1L1Q8N3D4 1523 aa27.56■■■□□ 2
SEMA3B-210ENST00000611067 PRG4Q92954 1404 aaPredicted RBP27.51■■■□□ 2
SEMA3B-210ENST00000611067 CDK13Q14004 1512 aaKnown RBP27.51■■■□□ 2
SEMA3B-210ENST00000611067 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
SEMA3B-210ENST00000611067 NUP153P49790 1475 aaKnown RBP27.49■■□□□ 1.99
SEMA3B-210ENST00000611067 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
SEMA3B-210ENST00000611067 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
SEMA3B-210ENST00000611067 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
SEMA3B-210ENST00000611067 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
SEMA3B-210ENST00000611067 NCOA2Q15596 1464 aa27.45■■□□□ 1.98
SEMA3B-210ENST00000611067 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
SEMA3B-210ENST00000611067 FAM50AQ14320 339 aaKnown RBP27.39■■□□□ 1.98
SEMA3B-210ENST00000611067 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
SEMA3B-210ENST00000611067 CDK11AQ9UQ88 783 aaPredicted RBP27.38■■□□□ 1.97
SEMA3B-210ENST00000611067 ITGAEP38570 1179 aa27.37■■□□□ 1.97
SEMA3B-210ENST00000611067 ABCA8O94911 1581 aa27.37■■□□□ 1.97
SEMA3B-210ENST00000611067 PTPRGP23470 1445 aa27.37■■□□□ 1.97
SEMA3B-210ENST00000611067 TSHZ2Q9NRE2 1034 aa27.36■■□□□ 1.97
SEMA3B-210ENST00000611067 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
SEMA3B-210ENST00000611067 MYOM3Q5VTT5 1437 aa27.36■■□□□ 1.97
SEMA3B-210ENST00000611067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
SEMA3B-210ENST00000611067 ERCC6L2Q5T890 1561 aa27.27■■□□□ 1.96
SEMA3B-210ENST00000611067 TROQ12816 1431 aaPredicted RBP27.24■■□□□ 1.95
SEMA3B-210ENST00000611067 PTPN23Q9H3S7 1636 aa27.22■■□□□ 1.95
SEMA3B-210ENST00000611067 ANP32EQ9BTT0 268 aa27.22■■□□□ 1.95
SEMA3B-210ENST00000611067 UACAQ9BZF9 1416 aa27.21■■□□□ 1.95
SEMA3B-210ENST00000611067 ATP10BO94823 1461 aa27.2■■□□□ 1.95
SEMA3B-210ENST00000611067 MIA2Q96PC5 1412 aa27.18■■□□□ 1.94
SEMA3B-210ENST00000611067 ADCY10Q96PN6 1610 aa27.16■■□□□ 1.94
SEMA3B-210ENST00000611067 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
SEMA3B-210ENST00000611067 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
SEMA3B-210ENST00000611067 ABCC2Q92887 1545 aa27.13■■□□□ 1.93
SEMA3B-210ENST00000611067 SETD5Q9C0A6 1442 aa27.12■■□□□ 1.93
SEMA3B-210ENST00000611067 MAPKBP1O60336 1514 aa27.12■■□□□ 1.93
SEMA3B-210ENST00000611067 KIF14Q15058 1648 aa27.11■■□□□ 1.93
SEMA3B-210ENST00000611067 RAB3GAP2Q9H2M9 1393 aa27.1■■□□□ 1.93
SEMA3B-210ENST00000611067 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
SEMA3B-210ENST00000611067 KCNH8Q96L42 1107 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms