RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 TIAM1Q13009 1591 aa37.79■■■■□ 3.64
CDH24-206ENST00000610348 CLSPNQ9HAW4 1339 aa37.76■■■■□ 3.63
CDH24-206ENST00000610348 EFCAB5A4FU69 1503 aa37.73■■■■□ 3.63
CDH24-206ENST00000610348 DIEXFQ68CQ4 756 aaKnown RBP37.71■■■■□ 3.63
CDH24-206ENST00000610348 CCNB3Q8WWL7 1395 aa37.7■■■■□ 3.63
CDH24-206ENST00000610348 CTTNBP2Q8WZ74 1663 aa37.69■■■■□ 3.62
CDH24-206ENST00000610348 ZNF316A6NFI3 1004 aaPredicted RBP37.66■■■■□ 3.62
CDH24-206ENST00000610348 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
CDH24-206ENST00000610348 ABCA5Q8WWZ7 1642 aa37.64■■■■□ 3.62
CDH24-206ENST00000610348 CFAP43Q8NDM7 1665 aa37.63■■■■□ 3.61
CDH24-206ENST00000610348 LRRC9Q6ZRR7 1453 aa37.6■■■■□ 3.61
CDH24-206ENST00000610348 PCF11O94913 1555 aaKnown RBP37.56■■■■□ 3.6
CDH24-206ENST00000610348 AQRO60306 1485 aaKnown RBP eCLIP37.55■■■■□ 3.62e-6■■■■■ 35.2
CDH24-206ENST00000610348 DHX57Q6P158 1386 aaKnown RBP37.55■■■■□ 3.6
CDH24-206ENST00000610348 FYCO1Q9BQS8 1478 aa37.54■■■■□ 3.6
CDH24-206ENST00000610348 GAPVD1Q14C86 1478 aa37.5■■■■□ 3.59
CDH24-206ENST00000610348 TDRD9Q8NDG6 1382 aaKnown RBP37.48■■■■□ 3.59
CDH24-206ENST00000610348 CASKIN1Q8WXD9 1431 aa37.47■■■■□ 3.59
CDH24-206ENST00000610348 IFT140Q96RY7 1462 aa37.46■■■■□ 3.59
CDH24-206ENST00000610348 FHOD3Q2V2M9 1422 aa37.45■■■■□ 3.59
CDH24-206ENST00000610348 FMN1Q68DA7 1419 aa37.41■■■■□ 3.58
CDH24-206ENST00000610348 ZNF608Q9ULD9 1512 aaPredicted RBP37.36■■■■□ 3.57
CDH24-206ENST00000610348 P3H3Q8IVL6 736 aa37.36■■■■□ 3.57
CDH24-206ENST00000610348 SAMD9Q5K651 1589 aa37.35■■■■□ 3.57
CDH24-206ENST00000610348 PHLDB1Q86UU1 1377 aa37.31■■■■□ 3.56
CDH24-206ENST00000610348 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
CDH24-206ENST00000610348 SNAPC4Q5SXM2 1469 aa37.24■■■■□ 3.55
CDH24-206ENST00000610348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.23■■■■□ 3.559e-9■■■■■ 49.5
CDH24-206ENST00000610348 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
CDH24-206ENST00000610348 ATP1B4Q9UN42 357 aaPredicted RBP37.19■■■■□ 3.54
CDH24-206ENST00000610348 RAB3GAP2Q9H2M9 1393 aa37.18■■■■□ 3.54
CDH24-206ENST00000610348 SETD5Q9C0A6 1442 aa37.18■■■■□ 3.54
CDH24-206ENST00000610348 ITGAEP38570 1179 aa37.17■■■■□ 3.54
CDH24-206ENST00000610348 CENPBP07199 599 aaPredicted RBP37.14■■■■□ 3.54
CDH24-206ENST00000610348 ACIN1Q9UKV3 1341 aaKnown RBP37.1■■■■□ 3.53
CDH24-206ENST00000610348 GRIN2BQ13224 1484 aa37.1■■■■□ 3.53
CDH24-206ENST00000610348 SCAF1Q9H7N4 1312 aaKnown RBP37.07■■■■□ 3.53
CDH24-206ENST00000610348 FAM50AQ14320 339 aaKnown RBP37.07■■■■□ 3.53
CDH24-206ENST00000610348 ADAMTS12P58397 1594 aa37.06■■■■□ 3.52
CDH24-206ENST00000610348 MTUS2Q5JR59 1369 aa37■■■■□ 3.51
CDH24-206ENST00000610348 MAPKBP1O60336 1514 aa36.99■■■■□ 3.51
CDH24-206ENST00000610348 LRRIQ1Q96JM4 1722 aa36.99■■■■□ 3.51
CDH24-206ENST00000610348 FGD6Q6ZV73 1430 aa36.98■■■■□ 3.51
CDH24-206ENST00000610348 IQGAP2Q13576 1575 aa36.97■■■■□ 3.51
CDH24-206ENST00000610348 EHBP1L1Q8N3D4 1523 aa36.94■■■■□ 3.5
CDH24-206ENST00000610348 CCDC18Q5T9S5 1454 aa36.93■■■■□ 3.5
CDH24-206ENST00000610348 NEUROD1Q13562 356 aa36.92■■■■□ 3.5
CDH24-206ENST00000610348 SUPT6HQ7KZ85 1726 aaKnown RBP36.92■■■■□ 3.5
CDH24-206ENST00000610348 HECW1Q76N89 1606 aa36.86■■■■□ 3.49
CDH24-206ENST00000610348 MIER1Q8N108 512 aa36.85■■■■□ 3.49
CDH24-206ENST00000610348 NCOA2Q15596 1464 aa36.85■■■■□ 3.49
CDH24-206ENST00000610348 MYOM3Q5VTT5 1437 aa36.83■■■■□ 3.49
CDH24-206ENST00000610348 MAGI1Q96QZ7 1491 aaPredicted RBP36.83■■■■□ 3.49
CDH24-206ENST00000610348 UGGT2Q9NYU1 1516 aa36.8■■■■□ 3.48
CDH24-206ENST00000610348 ARHGEF11O15085 1522 aa36.78■■■■□ 3.48
CDH24-206ENST00000610348 TIMELESSQ9UNS1 1208 aa36.76■■■■□ 3.47
CDH24-206ENST00000610348 HFM1A2PYH4 1435 aa36.71■■■■□ 3.47
CDH24-206ENST00000610348 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
CDH24-206ENST00000610348 GRIN2AQ12879 1464 aa36.68■■■■□ 3.46
CDH24-206ENST00000610348 PTPN23Q9H3S7 1636 aa36.67■■■■□ 3.46
CDH24-206ENST00000610348 KIAA0586Q9BVV6 1533 aa36.67■■■■□ 3.46
CDH24-206ENST00000610348 EPRSP07814 1512 aaKnown RBP36.66■■■■□ 3.46
CDH24-206ENST00000610348 MAGI3Q5TCQ9 1506 aa36.65■■■■□ 3.46
CDH24-206ENST00000610348 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
CDH24-206ENST00000610348 TCOF1Q13428 1488 aaKnown RBP36.61■■■■□ 3.45
CDH24-206ENST00000610348 FBLN2P98095 1184 aa36.59■■■■□ 3.45
CDH24-206ENST00000610348 PTPRKQ15262 1439 aa36.59■■■■□ 3.45
CDH24-206ENST00000610348 CHD1O14646 1710 aa36.57■■■■□ 3.44
CDH24-206ENST00000610348 UACAQ9BZF9 1416 aa36.57■■■■□ 3.44
CDH24-206ENST00000610348 KIAA0556O60303 1618 aa36.56■■■■□ 3.44
CDH24-206ENST00000610348 NAIPQ13075 1403 aa36.53■■■■□ 3.44
CDH24-206ENST00000610348 CEP170Q5SW79 1584 aa36.53■■■■□ 3.44
CDH24-206ENST00000610348 MIA2Q96PC5 1412 aa36.52■■■■□ 3.44
CDH24-206ENST00000610348 GTF3C3Q9Y5Q9 886 aa36.51■■■■□ 3.43
CDH24-206ENST00000610348 DISP1Q96F81 1524 aa36.5■■■■□ 3.43
CDH24-206ENST00000610348 YTHDC1Q96MU7 727 aaKnown RBP36.49■■■■□ 3.43
CDH24-206ENST00000610348 SIN3AQ96ST3 1273 aa36.49■■■■□ 3.43
CDH24-206ENST00000610348 CDK13Q14004 1512 aaKnown RBP36.48■■■■□ 3.43
CDH24-206ENST00000610348 AKNAQ7Z591 1439 aa36.47■■■■□ 3.43
CDH24-206ENST00000610348 GCC2Q8IWJ2 1684 aa36.43■■■■□ 3.42
CDH24-206ENST00000610348 NUP160Q12769 1436 aa36.43■■■■□ 3.42
CDH24-206ENST00000610348 RAPGEF6Q8TEU7 1601 aa36.39■■■■□ 3.42
CDH24-206ENST00000610348 PPP1R15AO75807 674 aaPredicted RBP36.35■■■■□ 3.41
CDH24-206ENST00000610348 NUP153P49790 1475 aaKnown RBP36.32■■■■□ 3.41
CDH24-206ENST00000610348 TONSLQ96HA7 1378 aa36.3■■■■□ 3.4
CDH24-206ENST00000610348 CDK11AQ9UQ88 783 aaPredicted RBP36.28■■■■□ 3.4
CDH24-206ENST00000610348 PELP1Q8IZL8 1130 aaKnown RBP36.19■■■■□ 3.38
CDH24-206ENST00000610348 CARMIL2Q6F5E8 1435 aa36.18■■■■□ 3.38
CDH24-206ENST00000610348 ROCK1Q13464 1354 aa36.18■■■■□ 3.38
CDH24-206ENST00000610348 RRP7BPQ9NSQ0 103 aa36.17■■■■□ 3.38
CDH24-206ENST00000610348 DNMT1P26358 1616 aaKnown RBP36.16■■■■□ 3.38
CDH24-206ENST00000610348 ARID3CA6NKF2 412 aa36.13■■■■□ 3.37
CDH24-206ENST00000610348 JPH4Q96JJ6 628 aa36.13■■■■□ 3.37
CDH24-206ENST00000610348 CHIC2Q9UKJ5 165 aa36.13■■■■□ 3.37
CDH24-206ENST00000610348 DAPK1P53355 1430 aa36.13■■■■□ 3.37
CDH24-206ENST00000610348 TROQ12816 1431 aaPredicted RBP36.13■■■■□ 3.37
CDH24-206ENST00000610348 ITSN2Q9NZM3 1697 aa36.09■■■■□ 3.37
CDH24-206ENST00000610348 ADCY10Q96PN6 1610 aa36.09■■■■□ 3.37
CDH24-206ENST00000610348 KDM6BO15054 1643 aa36.06■■■■□ 3.36
CDH24-206ENST00000610348 CLASP1Q7Z460 1538 aa36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms