RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 ARHGAP35Q9NRY4 1499 aa34.78■■■■□ 3.16
USF2-216ENST00000607959 ARAP1Q96P48 1450 aa34.75■■■■□ 3.15
USF2-216ENST00000607959 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
USF2-216ENST00000607959 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
USF2-216ENST00000607959 FBLN2P98095 1184 aa34.65■■■■□ 3.14
USF2-216ENST00000607959 IQGAP2Q13576 1575 aa34.63■■■■□ 3.13
USF2-216ENST00000607959 VPS8Q8N3P4 1428 aa34.63■■■■□ 3.13
USF2-216ENST00000607959 NUP160Q12769 1436 aa34.61■■■■□ 3.13
USF2-216ENST00000607959 KIAA0586Q9BVV6 1533 aa34.6■■■■□ 3.13
USF2-216ENST00000607959 CHD1O14646 1710 aa34.6■■■■□ 3.13
USF2-216ENST00000607959 EFCAB5A4FU69 1503 aa34.57■■■■□ 3.12
USF2-216ENST00000607959 SAMD9Q5K651 1589 aa34.56■■■■□ 3.12
USF2-216ENST00000607959 P3H3Q8IVL6 736 aa34.5■■■■□ 3.11
USF2-216ENST00000607959 UGGT2Q9NYU1 1516 aa34.49■■■■□ 3.11
USF2-216ENST00000607959 FHOD3Q2V2M9 1422 aa34.48■■■■□ 3.11
USF2-216ENST00000607959 DISP1Q96F81 1524 aa34.37■■■■□ 3.09
USF2-216ENST00000607959 PPARGC1BQ86YN6 1023 aaKnown RBP34.35■■■■□ 3.09
USF2-216ENST00000607959 KIAA0556O60303 1618 aa34.31■■■■□ 3.08
USF2-216ENST00000607959 JPH4Q96JJ6 628 aa34.29■■■■□ 3.08
USF2-216ENST00000607959 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
USF2-216ENST00000607959 FMN1Q68DA7 1419 aa34.24■■■■□ 3.07
USF2-216ENST00000607959 CLASP1Q7Z460 1538 aa34.22■■■■□ 3.07
USF2-216ENST00000607959 CASKIN1Q8WXD9 1431 aa34.19■■■■□ 3.06
USF2-216ENST00000607959 SHROOM2Q13796 1616 aa34.19■■■■□ 3.06
USF2-216ENST00000607959 FYCO1Q9BQS8 1478 aa34.16■■■■□ 3.06
USF2-216ENST00000607959 PRG4Q92954 1404 aaPredicted RBP34.11■■■■□ 3.05
USF2-216ENST00000607959 CARMIL2Q6F5E8 1435 aa34.1■■■■□ 3.05
USF2-216ENST00000607959 APLP2Q06481 763 aa34.1■■■■□ 3.05
USF2-216ENST00000607959 TTBK1Q5TCY1 1321 aaPredicted RBP34.09■■■■□ 3.05
USF2-216ENST00000607959 KANK4Q5T7N3 995 aaPredicted RBP34.07■■■■□ 3.04
USF2-216ENST00000607959 TIAM1Q13009 1591 aa34.07■■■■□ 3.04
USF2-216ENST00000607959 MAP3K1Q13233 1512 aa34.07■■■■□ 3.04
USF2-216ENST00000607959 LRRIQ1Q96JM4 1722 aa34.06■■■■□ 3.04
USF2-216ENST00000607959 CFAP43Q8NDM7 1665 aa34.03■■■■□ 3.04
USF2-216ENST00000607959 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
USF2-216ENST00000607959 TRIM26Q12899 539 aaPredicted RBP34.02■■■■□ 3.04
USF2-216ENST00000607959 ATP1B4Q9UN42 357 aaPredicted RBP34■■■■□ 3.03
USF2-216ENST00000607959 PCGF6Q9BYE7 350 aa33.96■■■■□ 3.03
USF2-216ENST00000607959 HECW1Q76N89 1606 aa33.94■■■■□ 3.02
USF2-216ENST00000607959 RAPGEF6Q8TEU7 1601 aa33.92■■■■□ 3.02
USF2-216ENST00000607959 OSCARQ8IYS5 282 aa33.92■■■■□ 3.02
USF2-216ENST00000607959 PLB1Q6P1J6 1458 aa33.91■■■■□ 3.02
USF2-216ENST00000607959 LRRC9Q6ZRR7 1453 aa33.91■■■■□ 3.02
USF2-216ENST00000607959 NUP153P49790 1475 aaKnown RBP33.88■■■■□ 3.01
USF2-216ENST00000607959 EPRSP07814 1512 aaKnown RBP33.86■■■■□ 3.01
USF2-216ENST00000607959 ABCA8O94911 1581 aa33.85■■■■□ 3.01
USF2-216ENST00000607959 PTPRGP23470 1445 aa33.84■■■■□ 3.01
USF2-216ENST00000607959 CCDC18Q5T9S5 1454 aa33.82■■■■□ 3
USF2-216ENST00000607959 CDK13Q14004 1512 aaKnown RBP33.82■■■■□ 3
USF2-216ENST00000607959 MAGI3Q5TCQ9 1506 aa33.77■■■■□ 3
USF2-216ENST00000607959 ARID3CA6NKF2 412 aa33.75■■■□□ 2.99
USF2-216ENST00000607959 MTUS2Q5JR59 1369 aa33.66■■■□□ 2.98
USF2-216ENST00000607959 UACAQ9BZF9 1416 aa33.66■■■□□ 2.98
USF2-216ENST00000607959 EHBP1L1Q8N3D4 1523 aa33.65■■■□□ 2.98
USF2-216ENST00000607959 PHLDB1Q86UU1 1377 aa33.62■■■□□ 2.97
USF2-216ENST00000607959 ATP10BO94823 1461 aa33.61■■■□□ 2.97
USF2-216ENST00000607959 ABCC2Q92887 1545 aa33.58■■■□□ 2.97
USF2-216ENST00000607959 RRBP1Q9P2E9 1410 aaKnown RBP33.57■■■□□ 2.96
USF2-216ENST00000607959 ARHGEF11O15085 1522 aa33.55■■■□□ 2.96
USF2-216ENST00000607959 NCOA2Q15596 1464 aa33.54■■■□□ 2.96
USF2-216ENST00000607959 SUPT6HQ7KZ85 1726 aaKnown RBP33.54■■■□□ 2.96
USF2-216ENST00000607959 UHRF1BP1LA0JNW5 1464 aa33.52■■■□□ 2.96
USF2-216ENST00000607959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.51■■■□□ 2.95
USF2-216ENST00000607959 HNRNPUL2Q1KMD3 747 aaKnown RBP33.51■■■□□ 2.95
USF2-216ENST00000607959 TROQ12816 1431 aaPredicted RBP33.47■■■□□ 2.95
USF2-216ENST00000607959 CDK11AQ9UQ88 783 aaPredicted RBP33.44■■■□□ 2.94
USF2-216ENST00000607959 ADCY10Q96PN6 1610 aa33.44■■■□□ 2.94
USF2-216ENST00000607959 CCNB3Q8WWL7 1395 aa33.44■■■□□ 2.94
USF2-216ENST00000607959 KDM5BQ9UGL1 1544 aa33.4■■■□□ 2.94
USF2-216ENST00000607959 KIF14Q15058 1648 aa33.38■■■□□ 2.93
USF2-216ENST00000607959 MYOM3Q5VTT5 1437 aa33.38■■■□□ 2.93
USF2-216ENST00000607959 ZCCHC11Q5TAX3 1644 aaKnown RBP33.37■■■□□ 2.93
USF2-216ENST00000607959 FGD6Q6ZV73 1430 aa33.36■■■□□ 2.93
USF2-216ENST00000607959 PLEKHD1A6NEE1 506 aa33.34■■■□□ 2.93
USF2-216ENST00000607959 RIMBP3CA6NJZ7 1639 aa33.29■■■□□ 2.92
USF2-216ENST00000607959 RIMBP3BA6NNM3 1639 aa33.29■■■□□ 2.92
USF2-216ENST00000607959 RIMBP3Q9UFD9 1639 aa33.29■■■□□ 2.92
USF2-216ENST00000607959 ABCC10Q5T3U5 1492 aa33.26■■■□□ 2.91
USF2-216ENST00000607959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.23■■■□□ 2.91
USF2-216ENST00000607959 PTPN23Q9H3S7 1636 aa33.21■■■□□ 2.91
USF2-216ENST00000607959 FAM50AQ14320 339 aaKnown RBP33.2■■■□□ 2.91
USF2-216ENST00000607959 GPATCH8Q9UKJ3 1502 aaKnown RBP33.19■■■□□ 2.9
USF2-216ENST00000607959 MIA2Q96PC5 1412 aa33.19■■■□□ 2.9
USF2-216ENST00000607959 TCOF1Q13428 1488 aaKnown RBP33.18■■■□□ 2.9
USF2-216ENST00000607959 CDC42BPAQ5VT25 1732 aa33.14■■■□□ 2.9
USF2-216ENST00000607959 ITSN2Q9NZM3 1697 aa33.11■■■□□ 2.89
USF2-216ENST00000607959 ITGAEP38570 1179 aa33.11■■■□□ 2.89
USF2-216ENST00000607959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.1■■■□□ 2.895e-6■□□□□ 9.5
USF2-216ENST00000607959 TTC37Q6PGP7 1564 aa33.1■■■□□ 2.89
USF2-216ENST00000607959 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
USF2-216ENST00000607959 WDR7Q9Y4E6 1490 aa33.06■■■□□ 2.88
USF2-216ENST00000607959 ZNF644Q9H582 1327 aaPredicted RBP33.05■■■□□ 2.88
USF2-216ENST00000607959 PTPRKQ15262 1439 aa33.05■■■□□ 2.88
USF2-216ENST00000607959 KCNH8Q96L42 1107 aa33.04■■■□□ 2.88
USF2-216ENST00000607959 ASXL2Q76L83 1435 aa33.04■■■□□ 2.88
USF2-216ENST00000607959 CFDP1Q9UEE9 299 aaPredicted RBP33.02■■■□□ 2.88
USF2-216ENST00000607959 CDC42BPBQ9Y5S2 1711 aa33.01■■■□□ 2.87
USF2-216ENST00000607959 PREX2Q70Z35 1606 aa33■■■□□ 2.87
USF2-216ENST00000607959 CAMSAP2Q08AD1 1489 aa32.98■■■□□ 2.87
USF2-216ENST00000607959 NPM1P06748 294 aaKnown RBP eCLIP32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms