RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
PRDM16-210ENST00000607632 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
PRDM16-210ENST00000607632 PRG4Q92954 1404 aaPredicted RBP24.38■■□□□ 1.49
PRDM16-210ENST00000607632 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
PRDM16-210ENST00000607632 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
PRDM16-210ENST00000607632 IQGAP2Q13576 1575 aa24.29■■□□□ 1.48
PRDM16-210ENST00000607632 EEA1Q15075 1411 aa24.24■■□□□ 1.47
PRDM16-210ENST00000607632 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.46
PRDM16-210ENST00000607632 CTTNBP2Q8WZ74 1663 aa24.19■■□□□ 1.46
PRDM16-210ENST00000607632 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
PRDM16-210ENST00000607632 DISP1Q96F81 1524 aa24.15■■□□□ 1.46
PRDM16-210ENST00000607632 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
PRDM16-210ENST00000607632 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
PRDM16-210ENST00000607632 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
PRDM16-210ENST00000607632 ADCY10Q96PN6 1610 aa24.1■■□□□ 1.45
PRDM16-210ENST00000607632 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
PRDM16-210ENST00000607632 PTPRGP23470 1445 aa24.07■■□□□ 1.44
PRDM16-210ENST00000607632 KIF21BO75037 1637 aa24.02■■□□□ 1.44
PRDM16-210ENST00000607632 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
PRDM16-210ENST00000607632 MAPKBP1O60336 1514 aa24■■□□□ 1.43
PRDM16-210ENST00000607632 UHRF1BP1LA0JNW5 1464 aa23.99■■□□□ 1.43
PRDM16-210ENST00000607632 GOLGA3Q08378 1498 aa23.99■■□□□ 1.43
PRDM16-210ENST00000607632 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
PRDM16-210ENST00000607632 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
PRDM16-210ENST00000607632 KIF13AQ9H1H9 1805 aa23.92■■□□□ 1.42
PRDM16-210ENST00000607632 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
PRDM16-210ENST00000607632 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
PRDM16-210ENST00000607632 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
PRDM16-210ENST00000607632 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
PRDM16-210ENST00000607632 KDM5BQ9UGL1 1544 aa23.87■■□□□ 1.41
PRDM16-210ENST00000607632 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
PRDM16-210ENST00000607632 ABCA8O94911 1581 aa23.85■■□□□ 1.41
PRDM16-210ENST00000607632 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
PRDM16-210ENST00000607632 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
PRDM16-210ENST00000607632 ZCCHC11Q5TAX3 1644 aaKnown RBP23.78■■□□□ 1.4
PRDM16-210ENST00000607632 ASXL2Q76L83 1435 aa23.76■■□□□ 1.39
PRDM16-210ENST00000607632 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
PRDM16-210ENST00000607632 GLI2P10070 1586 aa23.72■■□□□ 1.39
PRDM16-210ENST00000607632 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
PRDM16-210ENST00000607632 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
PRDM16-210ENST00000607632 RAPGEF6Q8TEU7 1601 aa23.66■■□□□ 1.38
PRDM16-210ENST00000607632 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
PRDM16-210ENST00000607632 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.38
PRDM16-210ENST00000607632 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
PRDM16-210ENST00000607632 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
PRDM16-210ENST00000607632 ATP10BO94823 1461 aa23.61■■□□□ 1.37
PRDM16-210ENST00000607632 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
PRDM16-210ENST00000607632 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
PRDM16-210ENST00000607632 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
PRDM16-210ENST00000607632 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
PRDM16-210ENST00000607632 TSPOAP1O95153 1857 aa23.56■■□□□ 1.36
PRDM16-210ENST00000607632 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
PRDM16-210ENST00000607632 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
PRDM16-210ENST00000607632 CFAP43Q8NDM7 1665 aa23.5■■□□□ 1.35
PRDM16-210ENST00000607632 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
PRDM16-210ENST00000607632 KDM6BO15054 1643 aa23.46■■□□□ 1.35
PRDM16-210ENST00000607632 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
PRDM16-210ENST00000607632 MAGI3Q5TCQ9 1506 aa23.44■■□□□ 1.34
PRDM16-210ENST00000607632 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
PRDM16-210ENST00000607632 ABCA9Q8IUA7 1624 aa23.42■■□□□ 1.34
PRDM16-210ENST00000607632 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
PRDM16-210ENST00000607632 ARID3CA6NKF2 412 aa23.4■■□□□ 1.34
PRDM16-210ENST00000607632 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
PRDM16-210ENST00000607632 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
PRDM16-210ENST00000607632 CDK13Q14004 1512 aaKnown RBP23.35■■□□□ 1.33
PRDM16-210ENST00000607632 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
PRDM16-210ENST00000607632 CLIP1P30622 1438 aa23.33■■□□□ 1.33
PRDM16-210ENST00000607632 LRRIQ1Q96JM4 1722 aa23.32■■□□□ 1.32
PRDM16-210ENST00000607632 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
PRDM16-210ENST00000607632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
PRDM16-210ENST00000607632 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
PRDM16-210ENST00000607632 CASKIN1Q8WXD9 1431 aa23.3■■□□□ 1.32
PRDM16-210ENST00000607632 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
PRDM16-210ENST00000607632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.26■■□□□ 1.31
PRDM16-210ENST00000607632 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
PRDM16-210ENST00000607632 ARAP3Q8WWN8 1544 aa23.24■■□□□ 1.31
PRDM16-210ENST00000607632 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
PRDM16-210ENST00000607632 CCDC18Q5T9S5 1454 aa23.23■■□□□ 1.31
PRDM16-210ENST00000607632 NEO1Q92859 1461 aa23.23■■□□□ 1.31
PRDM16-210ENST00000607632 TTC37Q6PGP7 1564 aa23.22■■□□□ 1.31
PRDM16-210ENST00000607632 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
PRDM16-210ENST00000607632 TROQ12816 1431 aaPredicted RBP23.19■■□□□ 1.3
PRDM16-210ENST00000607632 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
PRDM16-210ENST00000607632 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
PRDM16-210ENST00000607632 KIF14Q15058 1648 aa23.15■■□□□ 1.3
PRDM16-210ENST00000607632 CFAP74Q9C0B2 1584 aa23.14■■□□□ 1.3
PRDM16-210ENST00000607632 PLCH2O75038 1416 aa23.11■■□□□ 1.29
PRDM16-210ENST00000607632 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
PRDM16-210ENST00000607632 MYO5CQ9NQX4 1742 aa23.1■■□□□ 1.29
PRDM16-210ENST00000607632 FANCAO15360 1455 aa23.1■■□□□ 1.29
PRDM16-210ENST00000607632 FRMPD1Q5SYB0 1578 aa23.09■■□□□ 1.29
PRDM16-210ENST00000607632 AKNAQ7Z591 1439 aa23.07■■□□□ 1.28
PRDM16-210ENST00000607632 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
PRDM16-210ENST00000607632 DENND4BO75064 1496 aaPredicted RBP23.01■■□□□ 1.27
PRDM16-210ENST00000607632 CDC42BPBQ9Y5S2 1711 aa23■■□□□ 1.27
PRDM16-210ENST00000607632 PREX2Q70Z35 1606 aa23■■□□□ 1.27
PRDM16-210ENST00000607632 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
PRDM16-210ENST00000607632 RAPGEF3O95398 923 aa22.98■■□□□ 1.27
PRDM16-210ENST00000607632 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
PRDM16-210ENST00000607632 ADGRL1O94910 1474 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms