RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
PRDM16-210ENST00000607632 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
PRDM16-210ENST00000607632 ABCC9O60706 1549 aa30.82■■■□□ 2.52
PRDM16-210ENST00000607632 RB1CC1Q8TDY2 1594 aa29.67■■■□□ 2.34
PRDM16-210ENST00000607632 NACADO15069 1562 aa29.64■■■□□ 2.33
PRDM16-210ENST00000607632 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
PRDM16-210ENST00000607632 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
PRDM16-210ENST00000607632 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
PRDM16-210ENST00000607632 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
PRDM16-210ENST00000607632 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
PRDM16-210ENST00000607632 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
PRDM16-210ENST00000607632 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
PRDM16-210ENST00000607632 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
PRDM16-210ENST00000607632 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
PRDM16-210ENST00000607632 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
PRDM16-210ENST00000607632 EIF4G1Q04637 1599 aaKnown RBP28.04■■■□□ 2.08
PRDM16-210ENST00000607632 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
PRDM16-210ENST00000607632 CECR2Q9BXF3 1484 aa27.73■■■□□ 2.03
PRDM16-210ENST00000607632 SMARCA4P51532 1647 aa27.45■■□□□ 1.98
PRDM16-210ENST00000607632 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
PRDM16-210ENST00000607632 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
PRDM16-210ENST00000607632 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
PRDM16-210ENST00000607632 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
PRDM16-210ENST00000607632 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
PRDM16-210ENST00000607632 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
PRDM16-210ENST00000607632 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
PRDM16-210ENST00000607632 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
PRDM16-210ENST00000607632 WIZO95785 1651 aa26.89■■□□□ 1.9
PRDM16-210ENST00000607632 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
PRDM16-210ENST00000607632 NESP48681 1621 aa26.65■■□□□ 1.86
PRDM16-210ENST00000607632 LAMC3Q9Y6N6 1575 aa26.65■■□□□ 1.86
PRDM16-210ENST00000607632 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
PRDM16-210ENST00000607632 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
PRDM16-210ENST00000607632 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
PRDM16-210ENST00000607632 CUX2O14529 1486 aa26.43■■□□□ 1.82
PRDM16-210ENST00000607632 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
PRDM16-210ENST00000607632 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
PRDM16-210ENST00000607632 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
PRDM16-210ENST00000607632 CFTRP13569 1480 aa26.36■■□□□ 1.81
PRDM16-210ENST00000607632 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
PRDM16-210ENST00000607632 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
PRDM16-210ENST00000607632 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
PRDM16-210ENST00000607632 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
PRDM16-210ENST00000607632 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
PRDM16-210ENST00000607632 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
PRDM16-210ENST00000607632 WDR62O43379 1518 aa26.14■■□□□ 1.77
PRDM16-210ENST00000607632 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
PRDM16-210ENST00000607632 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
PRDM16-210ENST00000607632 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
PRDM16-210ENST00000607632 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
PRDM16-210ENST00000607632 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
PRDM16-210ENST00000607632 IFT140Q96RY7 1462 aa25.64■■□□□ 1.69
PRDM16-210ENST00000607632 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
PRDM16-210ENST00000607632 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
PRDM16-210ENST00000607632 CUX1P39880 1505 aa25.53■■□□□ 1.68
PRDM16-210ENST00000607632 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
PRDM16-210ENST00000607632 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
PRDM16-210ENST00000607632 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
PRDM16-210ENST00000607632 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.65
PRDM16-210ENST00000607632 SOGA1O94964 1423 aa25.38■■□□□ 1.65
PRDM16-210ENST00000607632 WDR97A6NE52 1622 aa25.38■■□□□ 1.65
PRDM16-210ENST00000607632 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
PRDM16-210ENST00000607632 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.64
PRDM16-210ENST00000607632 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
PRDM16-210ENST00000607632 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
PRDM16-210ENST00000607632 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
PRDM16-210ENST00000607632 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
PRDM16-210ENST00000607632 TDRD9Q8NDG6 1382 aaKnown RBP25.23■■□□□ 1.63
PRDM16-210ENST00000607632 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
PRDM16-210ENST00000607632 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
PRDM16-210ENST00000607632 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
PRDM16-210ENST00000607632 CHD1O14646 1710 aa25.13■■□□□ 1.61
PRDM16-210ENST00000607632 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
PRDM16-210ENST00000607632 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
PRDM16-210ENST00000607632 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
PRDM16-210ENST00000607632 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
PRDM16-210ENST00000607632 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
PRDM16-210ENST00000607632 SYNJ2O15056 1496 aa25■■□□□ 1.59
PRDM16-210ENST00000607632 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
PRDM16-210ENST00000607632 FBLN2P98095 1184 aa24.91■■□□□ 1.58
PRDM16-210ENST00000607632 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
PRDM16-210ENST00000607632 CLASP1Q7Z460 1538 aa24.91■■□□□ 1.58
PRDM16-210ENST00000607632 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
PRDM16-210ENST00000607632 RIMBP3CA6NJZ7 1639 aa24.89■■□□□ 1.57
PRDM16-210ENST00000607632 RIMBP3BA6NNM3 1639 aa24.89■■□□□ 1.57
PRDM16-210ENST00000607632 RIMBP3Q9UFD9 1639 aa24.89■■□□□ 1.57
PRDM16-210ENST00000607632 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
PRDM16-210ENST00000607632 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
PRDM16-210ENST00000607632 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
PRDM16-210ENST00000607632 NUP160Q12769 1436 aa24.76■■□□□ 1.55
PRDM16-210ENST00000607632 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
PRDM16-210ENST00000607632 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
PRDM16-210ENST00000607632 IGF1RP08069 1367 aa24.69■■□□□ 1.54
PRDM16-210ENST00000607632 CUL7Q14999 1698 aa24.68■■□□□ 1.54
PRDM16-210ENST00000607632 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
PRDM16-210ENST00000607632 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
PRDM16-210ENST00000607632 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
PRDM16-210ENST00000607632 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
PRDM16-210ENST00000607632 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
PRDM16-210ENST00000607632 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms