RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 NUP160Q12769 1436 aa25.81■■□□□ 1.72
CNN2-212ENST00000607102 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
CNN2-212ENST00000607102 KIAA0586Q9BVV6 1533 aa25.79■■□□□ 1.72
CNN2-212ENST00000607102 IQGAP2Q13576 1575 aa25.78■■□□□ 1.72
CNN2-212ENST00000607102 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
CNN2-212ENST00000607102 CLIP1P30622 1438 aa25.75■■□□□ 1.71
CNN2-212ENST00000607102 EFCAB5A4FU69 1503 aa25.71■■□□□ 1.71
CNN2-212ENST00000607102 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
CNN2-212ENST00000607102 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
CNN2-212ENST00000607102 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
CNN2-212ENST00000607102 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
CNN2-212ENST00000607102 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
CNN2-212ENST00000607102 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
CNN2-212ENST00000607102 CARMIL2Q6F5E8 1435 aa25.56■■□□□ 1.68
CNN2-212ENST00000607102 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
CNN2-212ENST00000607102 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
CNN2-212ENST00000607102 KIAA0556O60303 1618 aa25.5■■□□□ 1.67
CNN2-212ENST00000607102 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
CNN2-212ENST00000607102 VPS8Q8N3P4 1428 aa25.47■■□□□ 1.67
CNN2-212ENST00000607102 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
CNN2-212ENST00000607102 DISP1Q96F81 1524 aa25.46■■□□□ 1.67
CNN2-212ENST00000607102 FHOD3Q2V2M9 1422 aa25.45■■□□□ 1.66
CNN2-212ENST00000607102 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
CNN2-212ENST00000607102 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
CNN2-212ENST00000607102 FYCO1Q9BQS8 1478 aa25.31■■□□□ 1.64
CNN2-212ENST00000607102 APLP2Q06481 763 aa25.3■■□□□ 1.64
CNN2-212ENST00000607102 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
CNN2-212ENST00000607102 PTPRGP23470 1445 aa25.27■■□□□ 1.64
CNN2-212ENST00000607102 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
CNN2-212ENST00000607102 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
CNN2-212ENST00000607102 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
CNN2-212ENST00000607102 RAPGEF6Q8TEU7 1601 aa25.21■■□□□ 1.63
CNN2-212ENST00000607102 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
CNN2-212ENST00000607102 MAP3K1Q13233 1512 aa25.18■■□□□ 1.62
CNN2-212ENST00000607102 CCDC18Q5T9S5 1454 aa25.17■■□□□ 1.62
CNN2-212ENST00000607102 ATP1B4Q9UN42 357 aaPredicted RBP25.17■■□□□ 1.62
CNN2-212ENST00000607102 ABCA8O94911 1581 aa25.15■■□□□ 1.62
CNN2-212ENST00000607102 ARHGEF11O15085 1522 aa25.13■■□□□ 1.61
CNN2-212ENST00000607102 UACAQ9BZF9 1416 aa25.12■■□□□ 1.61
CNN2-212ENST00000607102 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
CNN2-212ENST00000607102 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
CNN2-212ENST00000607102 TIAM1Q13009 1591 aa25.1■■□□□ 1.61
CNN2-212ENST00000607102 ABCC2Q92887 1545 aa25.08■■□□□ 1.61
CNN2-212ENST00000607102 UHRF1BP1LA0JNW5 1464 aa25.07■■□□□ 1.6
CNN2-212ENST00000607102 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
CNN2-212ENST00000607102 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
CNN2-212ENST00000607102 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
CNN2-212ENST00000607102 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
CNN2-212ENST00000607102 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
CNN2-212ENST00000607102 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
CNN2-212ENST00000607102 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
CNN2-212ENST00000607102 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
CNN2-212ENST00000607102 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
CNN2-212ENST00000607102 MTUS2Q5JR59 1369 aa24.96■■□□□ 1.59
CNN2-212ENST00000607102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
CNN2-212ENST00000607102 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
CNN2-212ENST00000607102 EHBP1L1Q8N3D4 1523 aa24.96■■□□□ 1.59
CNN2-212ENST00000607102 ATP10BO94823 1461 aa24.93■■□□□ 1.58
CNN2-212ENST00000607102 ADCY10Q96PN6 1610 aa24.93■■□□□ 1.58
CNN2-212ENST00000607102 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
CNN2-212ENST00000607102 ARID3CA6NKF2 412 aa24.89■■□□□ 1.58
CNN2-212ENST00000607102 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
CNN2-212ENST00000607102 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
CNN2-212ENST00000607102 PLEKHD1A6NEE1 506 aa24.87■■□□□ 1.57
CNN2-212ENST00000607102 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
CNN2-212ENST00000607102 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
CNN2-212ENST00000607102 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
CNN2-212ENST00000607102 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
CNN2-212ENST00000607102 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
CNN2-212ENST00000607102 MAGI3Q5TCQ9 1506 aa24.8■■□□□ 1.56
CNN2-212ENST00000607102 KIF14Q15058 1648 aa24.78■■□□□ 1.56
CNN2-212ENST00000607102 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
CNN2-212ENST00000607102 WDR7Q9Y4E6 1490 aa24.72■■□□□ 1.55
CNN2-212ENST00000607102 TRIM26Q12899 539 aaPredicted RBP24.71■■□□□ 1.55
CNN2-212ENST00000607102 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
CNN2-212ENST00000607102 MAPKBP1O60336 1514 aa24.68■■□□□ 1.54
CNN2-212ENST00000607102 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
CNN2-212ENST00000607102 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
CNN2-212ENST00000607102 MYOM3Q5VTT5 1437 aa24.66■■□□□ 1.54
CNN2-212ENST00000607102 ITSN2Q9NZM3 1697 aa24.66■■□□□ 1.54
CNN2-212ENST00000607102 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
CNN2-212ENST00000607102 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
CNN2-212ENST00000607102 MIA2Q96PC5 1412 aa24.61■■□□□ 1.53
CNN2-212ENST00000607102 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
CNN2-212ENST00000607102 FGD6Q6ZV73 1430 aa24.59■■□□□ 1.53
CNN2-212ENST00000607102 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
CNN2-212ENST00000607102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.522e-6■□□□□ 8.3
CNN2-212ENST00000607102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.521e-6■□□□□ 11.1
CNN2-212ENST00000607102 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
CNN2-212ENST00000607102 GPATCH8Q9UKJ3 1502 aaKnown RBP24.54■■□□□ 1.52
CNN2-212ENST00000607102 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
CNN2-212ENST00000607102 TTC37Q6PGP7 1564 aa24.53■■□□□ 1.52
CNN2-212ENST00000607102 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
CNN2-212ENST00000607102 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
CNN2-212ENST00000607102 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
CNN2-212ENST00000607102 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
CNN2-212ENST00000607102 ARAP3Q8WWN8 1544 aa24.5■■□□□ 1.51
CNN2-212ENST00000607102 TCOF1Q13428 1488 aaKnown RBP24.48■■□□□ 1.51
CNN2-212ENST00000607102 GLI2P10070 1586 aa24.46■■□□□ 1.51
CNN2-212ENST00000607102 PLCH2O75038 1416 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms