RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
CNN2-212ENST00000607102 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
CNN2-212ENST00000607102 ABCC9O60706 1549 aa31.44■■■□□ 2.62
CNN2-212ENST00000607102 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
CNN2-212ENST00000607102 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
CNN2-212ENST00000607102 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
CNN2-212ENST00000607102 MYO15BQ96JP2 1530 aa30.97■■■□□ 2.55
CNN2-212ENST00000607102 NACADO15069 1562 aa30.88■■■□□ 2.53
CNN2-212ENST00000607102 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
CNN2-212ENST00000607102 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
CNN2-212ENST00000607102 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
CNN2-212ENST00000607102 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
CNN2-212ENST00000607102 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
CNN2-212ENST00000607102 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
CNN2-212ENST00000607102 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
CNN2-212ENST00000607102 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
CNN2-212ENST00000607102 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
CNN2-212ENST00000607102 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
CNN2-212ENST00000607102 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
CNN2-212ENST00000607102 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
CNN2-212ENST00000607102 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
CNN2-212ENST00000607102 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
CNN2-212ENST00000607102 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
CNN2-212ENST00000607102 WIZO95785 1651 aa28.58■■■□□ 2.17
CNN2-212ENST00000607102 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
CNN2-212ENST00000607102 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
CNN2-212ENST00000607102 NCAPD3P42695 1498 aa28.42■■■□□ 2.14
CNN2-212ENST00000607102 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
CNN2-212ENST00000607102 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
CNN2-212ENST00000607102 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
CNN2-212ENST00000607102 CCDC88BA6NC98 1476 aa28.01■■■□□ 2.07
CNN2-212ENST00000607102 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
CNN2-212ENST00000607102 CFTRP13569 1480 aa27.64■■■□□ 2.02
CNN2-212ENST00000607102 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
CNN2-212ENST00000607102 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
CNN2-212ENST00000607102 PRDM2Q13029 1718 aa27.56■■■□□ 2
CNN2-212ENST00000607102 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
CNN2-212ENST00000607102 NESP48681 1621 aa27.4■■□□□ 1.98
CNN2-212ENST00000607102 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
CNN2-212ENST00000607102 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
CNN2-212ENST00000607102 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
CNN2-212ENST00000607102 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
CNN2-212ENST00000607102 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
CNN2-212ENST00000607102 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
CNN2-212ENST00000607102 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
CNN2-212ENST00000607102 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
CNN2-212ENST00000607102 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
CNN2-212ENST00000607102 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
CNN2-212ENST00000607102 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
CNN2-212ENST00000607102 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
CNN2-212ENST00000607102 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
CNN2-212ENST00000607102 CUX1P39880 1505 aa27.03■■□□□ 1.92
CNN2-212ENST00000607102 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
CNN2-212ENST00000607102 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
CNN2-212ENST00000607102 WDR62O43379 1518 aa26.9■■□□□ 1.9
CNN2-212ENST00000607102 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
CNN2-212ENST00000607102 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
CNN2-212ENST00000607102 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
CNN2-212ENST00000607102 EEA1Q15075 1411 aa26.73■■□□□ 1.87
CNN2-212ENST00000607102 SOGA1O94964 1423 aa26.71■■□□□ 1.87
CNN2-212ENST00000607102 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
CNN2-212ENST00000607102 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
CNN2-212ENST00000607102 KIF27Q86VH2 1401 aa26.63■■□□□ 1.85
CNN2-212ENST00000607102 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
CNN2-212ENST00000607102 CUX2O14529 1486 aa26.6■■□□□ 1.85
CNN2-212ENST00000607102 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
CNN2-212ENST00000607102 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
CNN2-212ENST00000607102 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
CNN2-212ENST00000607102 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
CNN2-212ENST00000607102 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.83
CNN2-212ENST00000607102 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.82
CNN2-212ENST00000607102 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
CNN2-212ENST00000607102 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
CNN2-212ENST00000607102 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
CNN2-212ENST00000607102 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
CNN2-212ENST00000607102 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
CNN2-212ENST00000607102 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
CNN2-212ENST00000607102 CUL7Q14999 1698 aa26.33■■□□□ 1.81
CNN2-212ENST00000607102 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
CNN2-212ENST00000607102 IGF1RP08069 1367 aa26.33■■□□□ 1.8
CNN2-212ENST00000607102 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.81e-6■■■□□ 18.2
CNN2-212ENST00000607102 KIF21BO75037 1637 aa26.31■■□□□ 1.8
CNN2-212ENST00000607102 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
CNN2-212ENST00000607102 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
CNN2-212ENST00000607102 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
CNN2-212ENST00000607102 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
CNN2-212ENST00000607102 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
CNN2-212ENST00000607102 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
CNN2-212ENST00000607102 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
CNN2-212ENST00000607102 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
CNN2-212ENST00000607102 LOC105371045A0A1W2PR82 267 aa26.07■■□□□ 1.76
CNN2-212ENST00000607102 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
CNN2-212ENST00000607102 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
CNN2-212ENST00000607102 TNIKQ9UKE5 1360 aa26.03■■□□□ 1.76
CNN2-212ENST00000607102 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
CNN2-212ENST00000607102 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
CNN2-212ENST00000607102 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CNN2-212ENST00000607102 CTTNBP2Q8WZ74 1663 aa25.92■■□□□ 1.74
CNN2-212ENST00000607102 FBLN2P98095 1184 aa25.9■■□□□ 1.74
CNN2-212ENST00000607102 CHD1O14646 1710 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms