RNA–Protein interactions for RNA: ENST00000606525.5

NECAB3-218, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,010 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-218ENST00000606525 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
NECAB3-218ENST00000606525 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
NECAB3-218ENST00000606525 DHX57Q6P158 1386 aaKnown RBP27.71■■■□□ 2.03
NECAB3-218ENST00000606525 LRRC9Q6ZRR7 1453 aa27.71■■■□□ 2.03
NECAB3-218ENST00000606525 CLSPNQ9HAW4 1339 aa27.71■■■□□ 2.03
NECAB3-218ENST00000606525 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.03
NECAB3-218ENST00000606525 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.03
NECAB3-218ENST00000606525 CFAP43Q8NDM7 1665 aa27.69■■■□□ 2.02
NECAB3-218ENST00000606525 FHOD3Q2V2M9 1422 aa27.66■■■□□ 2.02
NECAB3-218ENST00000606525 P3H3Q8IVL6 736 aa27.65■■■□□ 2.02
NECAB3-218ENST00000606525 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
NECAB3-218ENST00000606525 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
NECAB3-218ENST00000606525 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
NECAB3-218ENST00000606525 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.014e-8■■■■■ 28.5
NECAB3-218ENST00000606525 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2.01
NECAB3-218ENST00000606525 PHLDB1Q86UU1 1377 aa27.56■■■□□ 2
NECAB3-218ENST00000606525 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
NECAB3-218ENST00000606525 ITGAEP38570 1179 aa27.51■■□□□ 1.99
NECAB3-218ENST00000606525 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
NECAB3-218ENST00000606525 SAMD9Q5K651 1589 aa27.5■■□□□ 1.99
NECAB3-218ENST00000606525 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
NECAB3-218ENST00000606525 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
NECAB3-218ENST00000606525 RAB3GAP2Q9H2M9 1393 aa27.44■■□□□ 1.98
NECAB3-218ENST00000606525 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
NECAB3-218ENST00000606525 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
NECAB3-218ENST00000606525 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
NECAB3-218ENST00000606525 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
NECAB3-218ENST00000606525 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
NECAB3-218ENST00000606525 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
NECAB3-218ENST00000606525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
NECAB3-218ENST00000606525 LRRIQ1Q96JM4 1722 aa27.34■■□□□ 1.97
NECAB3-218ENST00000606525 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
NECAB3-218ENST00000606525 MAPKBP1O60336 1514 aa27.32■■□□□ 1.96
NECAB3-218ENST00000606525 NEUROD1Q13562 356 aa27.31■■□□□ 1.96
NECAB3-218ENST00000606525 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
NECAB3-218ENST00000606525 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
NECAB3-218ENST00000606525 CENPBP07199 599 aaPredicted RBP27.27■■□□□ 1.96
NECAB3-218ENST00000606525 MTUS2Q5JR59 1369 aa27.25■■□□□ 1.95
NECAB3-218ENST00000606525 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
NECAB3-218ENST00000606525 MIER1Q8N108 512 aa27.24■■□□□ 1.95
NECAB3-218ENST00000606525 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
NECAB3-218ENST00000606525 WDR62O43379 1518 aa27.2■■□□□ 1.94
NECAB3-218ENST00000606525 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
NECAB3-218ENST00000606525 NCOA2Q15596 1464 aa27.16■■□□□ 1.94
NECAB3-218ENST00000606525 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
NECAB3-218ENST00000606525 SUPT6HQ7KZ85 1726 aaKnown RBP27.15■■□□□ 1.94
NECAB3-218ENST00000606525 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
NECAB3-218ENST00000606525 CCDC18Q5T9S5 1454 aa27.13■■□□□ 1.93
NECAB3-218ENST00000606525 MYOM3Q5VTT5 1437 aa27.12■■□□□ 1.93
NECAB3-218ENST00000606525 HECW1Q76N89 1606 aa27.1■■□□□ 1.93
NECAB3-218ENST00000606525 MAGI3Q5TCQ9 1506 aa27.09■■□□□ 1.93
NECAB3-218ENST00000606525 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
NECAB3-218ENST00000606525 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
NECAB3-218ENST00000606525 PTPRKQ15262 1439 aa27.06■■□□□ 1.92
NECAB3-218ENST00000606525 HFM1A2PYH4 1435 aa27.02■■□□□ 1.92
NECAB3-218ENST00000606525 EPRSP07814 1512 aaKnown RBP27.02■■□□□ 1.92
NECAB3-218ENST00000606525 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.91
NECAB3-218ENST00000606525 SIN3AQ96ST3 1273 aa27.01■■□□□ 1.91
NECAB3-218ENST00000606525 YTHDC1Q96MU7 727 aaKnown RBP27■■□□□ 1.91
NECAB3-218ENST00000606525 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
NECAB3-218ENST00000606525 KIAA0586Q9BVV6 1533 aa26.98■■□□□ 1.91
NECAB3-218ENST00000606525 GTF3C3Q9Y5Q9 886 aa26.97■■□□□ 1.91
NECAB3-218ENST00000606525 TIMELESSQ9UNS1 1208 aa26.97■■□□□ 1.91
NECAB3-218ENST00000606525 CDK13Q14004 1512 aaKnown RBP26.94■■□□□ 1.9
NECAB3-218ENST00000606525 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
NECAB3-218ENST00000606525 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
NECAB3-218ENST00000606525 TCOF1Q13428 1488 aaKnown RBP26.94■■□□□ 1.9
NECAB3-218ENST00000606525 NAIPQ13075 1403 aa26.94■■□□□ 1.9
NECAB3-218ENST00000606525 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
NECAB3-218ENST00000606525 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
NECAB3-218ENST00000606525 UACAQ9BZF9 1416 aa26.92■■□□□ 1.9
NECAB3-218ENST00000606525 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
NECAB3-218ENST00000606525 MIA2Q96PC5 1412 aa26.84■■□□□ 1.89
NECAB3-218ENST00000606525 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
NECAB3-218ENST00000606525 GCC2Q8IWJ2 1684 aa26.8■■□□□ 1.88
NECAB3-218ENST00000606525 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
NECAB3-218ENST00000606525 NUP153P49790 1475 aaKnown RBP26.79■■□□□ 1.88
NECAB3-218ENST00000606525 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
NECAB3-218ENST00000606525 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
NECAB3-218ENST00000606525 AKNAQ7Z591 1439 aa26.78■■□□□ 1.88
NECAB3-218ENST00000606525 CEP170Q5SW79 1584 aa26.77■■□□□ 1.88
NECAB3-218ENST00000606525 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
NECAB3-218ENST00000606525 RRP7BPQ9NSQ0 103 aa26.73■■□□□ 1.87
NECAB3-218ENST00000606525 TONSLQ96HA7 1378 aa26.72■■□□□ 1.87
NECAB3-218ENST00000606525 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
NECAB3-218ENST00000606525 KDM6BO15054 1643 aa26.67■■□□□ 1.86
NECAB3-218ENST00000606525 NUP160Q12769 1436 aa26.67■■□□□ 1.86
NECAB3-218ENST00000606525 CDK11AQ9UQ88 783 aaPredicted RBP26.65■■□□□ 1.86
NECAB3-218ENST00000606525 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.85
NECAB3-218ENST00000606525 DAPK1P53355 1430 aa26.62■■□□□ 1.85
NECAB3-218ENST00000606525 DNMT1P26358 1616 aaKnown RBP26.62■■□□□ 1.85
NECAB3-218ENST00000606525 FBLN2P98095 1184 aa26.61■■□□□ 1.85
NECAB3-218ENST00000606525 PLB1Q6P1J6 1458 aa26.61■■□□□ 1.85
NECAB3-218ENST00000606525 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
NECAB3-218ENST00000606525 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
NECAB3-218ENST00000606525 ROCK1Q13464 1354 aa26.59■■□□□ 1.85
NECAB3-218ENST00000606525 CARMIL2Q6F5E8 1435 aa26.59■■□□□ 1.85
NECAB3-218ENST00000606525 ABCC5O15440 1437 aa26.58■■□□□ 1.85
NECAB3-218ENST00000606525 DDX10Q13206 875 aaKnown RBP26.58■■□□□ 1.85
NECAB3-218ENST00000606525 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms