RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 EEA1Q15075 1411 aa23.88■■□□□ 1.41
TUBE1-211ENST00000605457 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
TUBE1-211ENST00000605457 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
TUBE1-211ENST00000605457 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
TUBE1-211ENST00000605457 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
TUBE1-211ENST00000605457 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
TUBE1-211ENST00000605457 IQGAP2Q13576 1575 aa23.79■■□□□ 1.4
TUBE1-211ENST00000605457 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
TUBE1-211ENST00000605457 JPH4Q96JJ6 628 aa23.77■■□□□ 1.4
TUBE1-211ENST00000605457 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
TUBE1-211ENST00000605457 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
TUBE1-211ENST00000605457 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.39
TUBE1-211ENST00000605457 KIF21BO75037 1637 aa23.7■■□□□ 1.38
TUBE1-211ENST00000605457 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
TUBE1-211ENST00000605457 DISP1Q96F81 1524 aa23.6■■□□□ 1.37
TUBE1-211ENST00000605457 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
TUBE1-211ENST00000605457 KIAA0556O60303 1618 aa23.58■■□□□ 1.37
TUBE1-211ENST00000605457 GOLGA3Q08378 1498 aa23.51■■□□□ 1.35
TUBE1-211ENST00000605457 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
TUBE1-211ENST00000605457 ADCY10Q96PN6 1610 aa23.48■■□□□ 1.35
TUBE1-211ENST00000605457 PTPRGP23470 1445 aa23.47■■□□□ 1.35
TUBE1-211ENST00000605457 SAMD9Q5K651 1589 aa23.46■■□□□ 1.35
TUBE1-211ENST00000605457 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
TUBE1-211ENST00000605457 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
TUBE1-211ENST00000605457 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
TUBE1-211ENST00000605457 ABCC2Q92887 1545 aa23.35■■□□□ 1.33
TUBE1-211ENST00000605457 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
TUBE1-211ENST00000605457 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
TUBE1-211ENST00000605457 EFCAB5A4FU69 1503 aa23.34■■□□□ 1.33
TUBE1-211ENST00000605457 ABCA8O94911 1581 aa23.3■■□□□ 1.32
TUBE1-211ENST00000605457 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
TUBE1-211ENST00000605457 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
TUBE1-211ENST00000605457 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
TUBE1-211ENST00000605457 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
TUBE1-211ENST00000605457 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
TUBE1-211ENST00000605457 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
TUBE1-211ENST00000605457 KDM5BQ9UGL1 1544 aa23.24■■□□□ 1.31
TUBE1-211ENST00000605457 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
TUBE1-211ENST00000605457 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
TUBE1-211ENST00000605457 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
TUBE1-211ENST00000605457 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
TUBE1-211ENST00000605457 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
TUBE1-211ENST00000605457 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
TUBE1-211ENST00000605457 ABCC10Q5T3U5 1492 aa23.15■■□□□ 1.3
TUBE1-211ENST00000605457 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
TUBE1-211ENST00000605457 NUP153P49790 1475 aaKnown RBP23.09■■□□□ 1.29
TUBE1-211ENST00000605457 FMN1Q68DA7 1419 aa23.08■■□□□ 1.28
TUBE1-211ENST00000605457 CLIP1P30622 1438 aa23.07■■□□□ 1.28
TUBE1-211ENST00000605457 ATP10BO94823 1461 aa23.07■■□□□ 1.28
TUBE1-211ENST00000605457 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
TUBE1-211ENST00000605457 GLI2P10070 1586 aa23.02■■□□□ 1.28
TUBE1-211ENST00000605457 FAM69CQ0P6D2 419 aa23.02■■□□□ 1.28
TUBE1-211ENST00000605457 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
TUBE1-211ENST00000605457 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
TUBE1-211ENST00000605457 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
TUBE1-211ENST00000605457 TSPOAP1O95153 1857 aa23■■□□□ 1.27
TUBE1-211ENST00000605457 CEP162Q5TB80 1403 aa23■■□□□ 1.27
TUBE1-211ENST00000605457 ARID3CA6NKF2 412 aa23■■□□□ 1.27
TUBE1-211ENST00000605457 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
TUBE1-211ENST00000605457 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
TUBE1-211ENST00000605457 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
TUBE1-211ENST00000605457 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
TUBE1-211ENST00000605457 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
TUBE1-211ENST00000605457 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
TUBE1-211ENST00000605457 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
TUBE1-211ENST00000605457 FYCO1Q9BQS8 1478 aa22.89■■□□□ 1.25
TUBE1-211ENST00000605457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
TUBE1-211ENST00000605457 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
TUBE1-211ENST00000605457 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
TUBE1-211ENST00000605457 KCNH8Q96L42 1107 aa22.85■■□□□ 1.25
TUBE1-211ENST00000605457 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
TUBE1-211ENST00000605457 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
TUBE1-211ENST00000605457 PLEKHD1A6NEE1 506 aa22.8■■□□□ 1.24
TUBE1-211ENST00000605457 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
TUBE1-211ENST00000605457 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
TUBE1-211ENST00000605457 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
TUBE1-211ENST00000605457 KDM6BO15054 1643 aa22.76■■□□□ 1.23
TUBE1-211ENST00000605457 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
TUBE1-211ENST00000605457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.76■■□□□ 1.23
TUBE1-211ENST00000605457 KIF14Q15058 1648 aa22.73■■□□□ 1.23
TUBE1-211ENST00000605457 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
TUBE1-211ENST00000605457 CDK11AQ9UQ88 783 aaPredicted RBP22.73■■□□□ 1.23
TUBE1-211ENST00000605457 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
TUBE1-211ENST00000605457 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
TUBE1-211ENST00000605457 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
TUBE1-211ENST00000605457 CFAP74Q9C0B2 1584 aa22.62■■□□□ 1.21
TUBE1-211ENST00000605457 NEO1Q92859 1461 aa22.61■■□□□ 1.21
TUBE1-211ENST00000605457 TIAM1Q13009 1591 aa22.61■■□□□ 1.21
TUBE1-211ENST00000605457 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
TUBE1-211ENST00000605457 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
TUBE1-211ENST00000605457 FANCAO15360 1455 aa22.58■■□□□ 1.2
TUBE1-211ENST00000605457 PLCH2O75038 1416 aa22.58■■□□□ 1.2
TUBE1-211ENST00000605457 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.2
TUBE1-211ENST00000605457 CDC42BPBQ9Y5S2 1711 aa22.58■■□□□ 1.2
TUBE1-211ENST00000605457 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
TUBE1-211ENST00000605457 PHLDB1Q86UU1 1377 aa22.57■■□□□ 1.2
TUBE1-211ENST00000605457 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
TUBE1-211ENST00000605457 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
TUBE1-211ENST00000605457 AKNAQ7Z591 1439 aa22.51■■□□□ 1.19
TUBE1-211ENST00000605457 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms