RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
TUBE1-211ENST00000605457 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
TUBE1-211ENST00000605457 ABCC9O60706 1549 aa29.91■■■□□ 2.38
TUBE1-211ENST00000605457 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
TUBE1-211ENST00000605457 NACADO15069 1562 aa28.84■■■□□ 2.21
TUBE1-211ENST00000605457 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
TUBE1-211ENST00000605457 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
TUBE1-211ENST00000605457 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
TUBE1-211ENST00000605457 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
TUBE1-211ENST00000605457 UNC13AQ9UPW8 1703 aa28.33■■■□□ 2.13
TUBE1-211ENST00000605457 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
TUBE1-211ENST00000605457 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
TUBE1-211ENST00000605457 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
TUBE1-211ENST00000605457 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
TUBE1-211ENST00000605457 DNAJC5BQ9UF47 199 aa27.34■■□□□ 1.97
TUBE1-211ENST00000605457 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
TUBE1-211ENST00000605457 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
TUBE1-211ENST00000605457 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
TUBE1-211ENST00000605457 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
TUBE1-211ENST00000605457 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
TUBE1-211ENST00000605457 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.85
TUBE1-211ENST00000605457 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
TUBE1-211ENST00000605457 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
TUBE1-211ENST00000605457 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
TUBE1-211ENST00000605457 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
TUBE1-211ENST00000605457 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
TUBE1-211ENST00000605457 BAZ1BQ9UIG0 1483 aaKnown RBP26.4■■□□□ 1.82
TUBE1-211ENST00000605457 WIZO95785 1651 aa26.39■■□□□ 1.82
TUBE1-211ENST00000605457 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
TUBE1-211ENST00000605457 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
TUBE1-211ENST00000605457 NESP48681 1621 aa25.93■■□□□ 1.74
TUBE1-211ENST00000605457 LAMC3Q9Y6N6 1575 aa25.91■■□□□ 1.74
TUBE1-211ENST00000605457 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
TUBE1-211ENST00000605457 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
TUBE1-211ENST00000605457 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
TUBE1-211ENST00000605457 KIF21AQ7Z4S6 1674 aa25.72■■□□□ 1.71
TUBE1-211ENST00000605457 CFTRP13569 1480 aa25.69■■□□□ 1.7
TUBE1-211ENST00000605457 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
TUBE1-211ENST00000605457 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
TUBE1-211ENST00000605457 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
TUBE1-211ENST00000605457 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
TUBE1-211ENST00000605457 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
TUBE1-211ENST00000605457 CUX2O14529 1486 aa25.49■■□□□ 1.67
TUBE1-211ENST00000605457 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
TUBE1-211ENST00000605457 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
TUBE1-211ENST00000605457 WDR62O43379 1518 aa25.38■■□□□ 1.65
TUBE1-211ENST00000605457 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
TUBE1-211ENST00000605457 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
TUBE1-211ENST00000605457 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
TUBE1-211ENST00000605457 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
TUBE1-211ENST00000605457 CUX1P39880 1505 aa24.99■■□□□ 1.59
TUBE1-211ENST00000605457 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
TUBE1-211ENST00000605457 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
TUBE1-211ENST00000605457 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
TUBE1-211ENST00000605457 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
TUBE1-211ENST00000605457 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
TUBE1-211ENST00000605457 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
TUBE1-211ENST00000605457 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
TUBE1-211ENST00000605457 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
TUBE1-211ENST00000605457 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
TUBE1-211ENST00000605457 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
TUBE1-211ENST00000605457 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
TUBE1-211ENST00000605457 SOGA1O94964 1423 aa24.78■■□□□ 1.56
TUBE1-211ENST00000605457 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
TUBE1-211ENST00000605457 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
TUBE1-211ENST00000605457 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
TUBE1-211ENST00000605457 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
TUBE1-211ENST00000605457 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
TUBE1-211ENST00000605457 PBRM1Q86U86 1689 aa24.58■■□□□ 1.52
TUBE1-211ENST00000605457 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
TUBE1-211ENST00000605457 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
TUBE1-211ENST00000605457 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
TUBE1-211ENST00000605457 CHD1O14646 1710 aa24.5■■□□□ 1.51
TUBE1-211ENST00000605457 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
TUBE1-211ENST00000605457 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
TUBE1-211ENST00000605457 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
TUBE1-211ENST00000605457 ERICH3Q5RHP9 1530 aa24.37■■□□□ 1.49
TUBE1-211ENST00000605457 SYNJ2O15056 1496 aa24.36■■□□□ 1.49
TUBE1-211ENST00000605457 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
TUBE1-211ENST00000605457 FBLN2P98095 1184 aa24.3■■□□□ 1.48
TUBE1-211ENST00000605457 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
TUBE1-211ENST00000605457 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
TUBE1-211ENST00000605457 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
TUBE1-211ENST00000605457 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
TUBE1-211ENST00000605457 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
TUBE1-211ENST00000605457 CUL7Q14999 1698 aa24.2■■□□□ 1.46
TUBE1-211ENST00000605457 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
TUBE1-211ENST00000605457 IGF1RP08069 1367 aa24.16■■□□□ 1.46
TUBE1-211ENST00000605457 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
TUBE1-211ENST00000605457 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
TUBE1-211ENST00000605457 NUP160Q12769 1436 aa24.1■■□□□ 1.45
TUBE1-211ENST00000605457 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
TUBE1-211ENST00000605457 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
TUBE1-211ENST00000605457 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
TUBE1-211ENST00000605457 ARHGEF11O15085 1522 aa24.07■■□□□ 1.44
TUBE1-211ENST00000605457 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
TUBE1-211ENST00000605457 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
TUBE1-211ENST00000605457 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
TUBE1-211ENST00000605457 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
TUBE1-211ENST00000605457 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms