RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
NEDD8-MDP1-203ENST00000604306 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
NEDD8-MDP1-203ENST00000604306 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
NEDD8-MDP1-203ENST00000604306 SAMD9Q5K651 1589 aa19.4■□□□□ 0.7
NEDD8-MDP1-203ENST00000604306 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
NEDD8-MDP1-203ENST00000604306 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 UGGT2Q9NYU1 1516 aa19.31■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 NUP160Q12769 1436 aa19.3■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 CHD1O14646 1710 aa19.28■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 MAP3K1Q13233 1512 aa19.28■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
NEDD8-MDP1-203ENST00000604306 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
NEDD8-MDP1-203ENST00000604306 CFAP43Q8NDM7 1665 aa19.22■□□□□ 0.67
NEDD8-MDP1-203ENST00000604306 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
NEDD8-MDP1-203ENST00000604306 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
NEDD8-MDP1-203ENST00000604306 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
NEDD8-MDP1-203ENST00000604306 DISP1Q96F81 1524 aa19.12■□□□□ 0.65
NEDD8-MDP1-203ENST00000604306 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
NEDD8-MDP1-203ENST00000604306 APLP2Q06481 763 aa19.11■□□□□ 0.65
NEDD8-MDP1-203ENST00000604306 HECW1Q76N89 1606 aa19.1■□□□□ 0.65
NEDD8-MDP1-203ENST00000604306 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
NEDD8-MDP1-203ENST00000604306 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
NEDD8-MDP1-203ENST00000604306 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
NEDD8-MDP1-203ENST00000604306 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
NEDD8-MDP1-203ENST00000604306 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
NEDD8-MDP1-203ENST00000604306 FBLN2P98095 1184 aa19.01■□□□□ 0.63
NEDD8-MDP1-203ENST00000604306 LRRC9Q6ZRR7 1453 aa18.99■□□□□ 0.63
NEDD8-MDP1-203ENST00000604306 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
NEDD8-MDP1-203ENST00000604306 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 ABCA8O94911 1581 aa18.92■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 EPRSP07814 1512 aaKnown RBP18.91■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
NEDD8-MDP1-203ENST00000604306 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.61
NEDD8-MDP1-203ENST00000604306 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 PTPRGP23470 1445 aa18.79■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
NEDD8-MDP1-203ENST00000604306 UHRF1BP1LA0JNW5 1464 aa18.76■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 ABCC2Q92887 1545 aa18.75■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 CCNB3Q8WWL7 1395 aa18.74■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 ITSN2Q9NZM3 1697 aa18.73■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 PHLDB1Q86UU1 1377 aa18.71■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
NEDD8-MDP1-203ENST00000604306 MYOM3Q5VTT5 1437 aa18.7■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 KIF14Q15058 1648 aa18.67■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 ATP10BO94823 1461 aa18.67■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
NEDD8-MDP1-203ENST00000604306 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
NEDD8-MDP1-203ENST00000604306 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
NEDD8-MDP1-203ENST00000604306 ZCCHC11Q5TAX3 1644 aaKnown RBP18.63■□□□□ 0.57
NEDD8-MDP1-203ENST00000604306 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
NEDD8-MDP1-203ENST00000604306 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
NEDD8-MDP1-203ENST00000604306 PREX2Q70Z35 1606 aa18.54■□□□□ 0.56
NEDD8-MDP1-203ENST00000604306 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
NEDD8-MDP1-203ENST00000604306 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.56
NEDD8-MDP1-203ENST00000604306 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 HRCP23327 699 aa18.5■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 GCC2Q8IWJ2 1684 aa18.48■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 ARAP3Q8WWN8 1544 aa18.47■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
NEDD8-MDP1-203ENST00000604306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 TTC37Q6PGP7 1564 aa18.44■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 CAMSAP2Q08AD1 1489 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms