RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
UBE2E3-214ENST00000602970 CUL7Q14999 1698 aa19.59■□□□□ 0.73
UBE2E3-214ENST00000602970 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
UBE2E3-214ENST00000602970 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
UBE2E3-214ENST00000602970 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
UBE2E3-214ENST00000602970 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
UBE2E3-214ENST00000602970 IGF1RP08069 1367 aa19.56■□□□□ 0.72
UBE2E3-214ENST00000602970 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
UBE2E3-214ENST00000602970 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
UBE2E3-214ENST00000602970 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
UBE2E3-214ENST00000602970 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
UBE2E3-214ENST00000602970 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
UBE2E3-214ENST00000602970 CARMIL1Q5VZK9 1371 aa19.48■□□□□ 0.71
UBE2E3-214ENST00000602970 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
UBE2E3-214ENST00000602970 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
UBE2E3-214ENST00000602970 U3KPZ7 1027 aaPredicted RBP19.42■□□□□ 0.7
UBE2E3-214ENST00000602970 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
UBE2E3-214ENST00000602970 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
UBE2E3-214ENST00000602970 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
UBE2E3-214ENST00000602970 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
UBE2E3-214ENST00000602970 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
UBE2E3-214ENST00000602970 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
UBE2E3-214ENST00000602970 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
UBE2E3-214ENST00000602970 GRIN2AQ12879 1464 aa19.27■□□□□ 0.67
UBE2E3-214ENST00000602970 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
UBE2E3-214ENST00000602970 CLIP1P30622 1438 aa19.25■□□□□ 0.67
UBE2E3-214ENST00000602970 CHD1O14646 1710 aa19.22■□□□□ 0.67
UBE2E3-214ENST00000602970 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
UBE2E3-214ENST00000602970 CEP170Q5SW79 1584 aa19.17■□□□□ 0.66
UBE2E3-214ENST00000602970 CHMP7Q8WUX9 453 aaPredicted RBP19.15■□□□□ 0.66
UBE2E3-214ENST00000602970 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
UBE2E3-214ENST00000602970 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
UBE2E3-214ENST00000602970 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
UBE2E3-214ENST00000602970 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
UBE2E3-214ENST00000602970 NUP160Q12769 1436 aa19.12■□□□□ 0.65
UBE2E3-214ENST00000602970 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
UBE2E3-214ENST00000602970 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
UBE2E3-214ENST00000602970 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
UBE2E3-214ENST00000602970 CAPN15O75808 1086 aa19.11■□□□□ 0.65
UBE2E3-214ENST00000602970 FBLN2P98095 1184 aa19.1■□□□□ 0.65
UBE2E3-214ENST00000602970 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
UBE2E3-214ENST00000602970 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
UBE2E3-214ENST00000602970 KIAA0556O60303 1618 aa19■□□□□ 0.63
UBE2E3-214ENST00000602970 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
UBE2E3-214ENST00000602970 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
UBE2E3-214ENST00000602970 DSG3P32926 999 aa18.96■□□□□ 0.63
UBE2E3-214ENST00000602970 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
UBE2E3-214ENST00000602970 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
UBE2E3-214ENST00000602970 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
UBE2E3-214ENST00000602970 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
UBE2E3-214ENST00000602970 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
UBE2E3-214ENST00000602970 CARMIL2Q6F5E8 1435 aa18.88■□□□□ 0.61
UBE2E3-214ENST00000602970 FYCO1Q9BQS8 1478 aa18.88■□□□□ 0.61
UBE2E3-214ENST00000602970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
UBE2E3-214ENST00000602970 APLP2Q06481 763 aa18.87■□□□□ 0.61
UBE2E3-214ENST00000602970 HNRNPUL2Q1KMD3 747 aaKnown RBP18.87■□□□□ 0.61
UBE2E3-214ENST00000602970 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
UBE2E3-214ENST00000602970 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
UBE2E3-214ENST00000602970 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
UBE2E3-214ENST00000602970 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
UBE2E3-214ENST00000602970 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
UBE2E3-214ENST00000602970 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
UBE2E3-214ENST00000602970 LRRIQ1Q96JM4 1722 aa18.81■□□□□ 0.6
UBE2E3-214ENST00000602970 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
UBE2E3-214ENST00000602970 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
UBE2E3-214ENST00000602970 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
UBE2E3-214ENST00000602970 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
UBE2E3-214ENST00000602970 SAMD1Q6SPF0 538 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-214ENST00000602970 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
UBE2E3-214ENST00000602970 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
UBE2E3-214ENST00000602970 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
UBE2E3-214ENST00000602970 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
UBE2E3-214ENST00000602970 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
UBE2E3-214ENST00000602970 ABCA8O94911 1581 aa18.72■□□□□ 0.59
UBE2E3-214ENST00000602970 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
UBE2E3-214ENST00000602970 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
UBE2E3-214ENST00000602970 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
UBE2E3-214ENST00000602970 ABCB7O75027 752 aa18.68■□□□□ 0.58
UBE2E3-214ENST00000602970 PTPRGP23470 1445 aa18.67■□□□□ 0.58
UBE2E3-214ENST00000602970 NUP153P49790 1475 aaKnown RBP18.67■□□□□ 0.58
UBE2E3-214ENST00000602970 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
UBE2E3-214ENST00000602970 EPRSP07814 1512 aaKnown RBP18.67■□□□□ 0.58
UBE2E3-214ENST00000602970 LRRC9Q6ZRR7 1453 aa18.66■□□□□ 0.58
UBE2E3-214ENST00000602970 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
UBE2E3-214ENST00000602970 EHBP1L1Q8N3D4 1523 aa18.63■□□□□ 0.57
UBE2E3-214ENST00000602970 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
UBE2E3-214ENST00000602970 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
UBE2E3-214ENST00000602970 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
UBE2E3-214ENST00000602970 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
UBE2E3-214ENST00000602970 MAGI3Q5TCQ9 1506 aa18.58■□□□□ 0.56
UBE2E3-214ENST00000602970 SUPT6HQ7KZ85 1726 aaKnown RBP18.57■□□□□ 0.56
UBE2E3-214ENST00000602970 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
UBE2E3-214ENST00000602970 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
UBE2E3-214ENST00000602970 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
UBE2E3-214ENST00000602970 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
UBE2E3-214ENST00000602970 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.55
UBE2E3-214ENST00000602970 ATP10BO94823 1461 aa18.52■□□□□ 0.55
UBE2E3-214ENST00000602970 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
UBE2E3-214ENST00000602970 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
UBE2E3-214ENST00000602970 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms