RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 KIAA0586Q9BVV6 1533 aa41.07■■■■■ 4.16
UBE2E3-213ENST00000602959 JPH4Q96JJ6 628 aa41■■■■■ 4.15
UBE2E3-213ENST00000602959 RAPGEF2Q9Y4G8 1499 aa40.98■■■■■ 4.15
UBE2E3-213ENST00000602959 PRG4Q92954 1404 aaPredicted RBP40.98■■■■■ 4.15
UBE2E3-213ENST00000602959 IQGAP2Q13576 1575 aa40.83■■■■■ 4.13
UBE2E3-213ENST00000602959 PRXQ9BXM0 1461 aa40.83■■■■■ 4.13
UBE2E3-213ENST00000602959 EEA1Q15075 1411 aa40.75■■■■■ 4.11
UBE2E3-213ENST00000602959 CHIC1Q5VXU3 224 aa40.72■■■■■ 4.11
UBE2E3-213ENST00000602959 CTTNBP2Q8WZ74 1663 aa40.69■■■■■ 4.1
UBE2E3-213ENST00000602959 CSRNP3Q8WYN3 585 aa40.64■■■■■ 4.1
UBE2E3-213ENST00000602959 UGGT2Q9NYU1 1516 aa40.62■■■■■ 4.09
UBE2E3-213ENST00000602959 CARMIL2Q6F5E8 1435 aa40.6■■■■■ 4.09
UBE2E3-213ENST00000602959 DISP1Q96F81 1524 aa40.55■■■■■ 4.08
UBE2E3-213ENST00000602959 TNIKQ9UKE5 1360 aa40.48■■■■■ 4.07
UBE2E3-213ENST00000602959 KIAA0556O60303 1618 aa40.46■■■■■ 4.07
UBE2E3-213ENST00000602959 ADCY10Q96PN6 1610 aa40.45■■■■■ 4.07
UBE2E3-213ENST00000602959 PTPRGP23470 1445 aa40.45■■■■■ 4.07
UBE2E3-213ENST00000602959 TRHP20396 242 aaPredicted RBP40.42■■■■■ 4.06
UBE2E3-213ENST00000602959 FAM9AQ8IZU1 332 aaPredicted RBP40.4■■■■■ 4.06
UBE2E3-213ENST00000602959 KIF21BO75037 1637 aa40.38■■■■■ 4.06
UBE2E3-213ENST00000602959 GOLGA3Q08378 1498 aa40.34■■■■■ 4.05
UBE2E3-213ENST00000602959 TTBK1Q5TCY1 1321 aaPredicted RBP40.25■■■■■ 4.03
UBE2E3-213ENST00000602959 MAPKBP1O60336 1514 aa40.25■■■■■ 4.03
UBE2E3-213ENST00000602959 UHRF1BP1LA0JNW5 1464 aa40.23■■■■■ 4.03
UBE2E3-213ENST00000602959 NPM1P06748 294 aaKnown RBP eCLIP40.22■■■■■ 4.03
UBE2E3-213ENST00000602959 UACAQ9BZF9 1416 aa40.2■■■■■ 4.03
UBE2E3-213ENST00000602959 ABCC2Q92887 1545 aa40.19■■■■■ 4.02
UBE2E3-213ENST00000602959 SAMD9Q5K651 1589 aa40.15■■■■■ 4.02
UBE2E3-213ENST00000602959 KIF13AQ9H1H9 1805 aa40.13■■■■■ 4.01
UBE2E3-213ENST00000602959 ABCC10Q5T3U5 1492 aa40.05■■■■■ 4
UBE2E3-213ENST00000602959 KDM5BQ9UGL1 1544 aa40.04■■■■■ 4
UBE2E3-213ENST00000602959 ABCA8O94911 1581 aa40.03■■■■■ 4
UBE2E3-213ENST00000602959 PLB1Q6P1J6 1458 aa40.02■■■■■ 4
UBE2E3-213ENST00000602959 DIP2BQ9P265 1576 aa40.01■■■■■ 4
UBE2E3-213ENST00000602959 ZCCHC11Q5TAX3 1644 aaKnown RBP39.96■■■■□ 3.99
UBE2E3-213ENST00000602959 EFCAB5A4FU69 1503 aa39.92■■■■□ 3.98
UBE2E3-213ENST00000602959 P3H3Q8IVL6 736 aa39.92■■■■□ 3.98
UBE2E3-213ENST00000602959 ASXL2Q76L83 1435 aa39.91■■■■□ 3.98
UBE2E3-213ENST00000602959 UBTFP17480 764 aaKnown RBP39.87■■■■□ 3.97
UBE2E3-213ENST00000602959 FAM69CQ0P6D2 419 aa39.87■■■■□ 3.97
UBE2E3-213ENST00000602959 EHMT2Q96KQ7 1210 aa39.84■■■■□ 3.97
UBE2E3-213ENST00000602959 RANGAP1P46060 587 aaPredicted RBP39.82■■■■□ 3.97
UBE2E3-213ENST00000602959 FHOD3Q2V2M9 1422 aa39.82■■■■□ 3.96
UBE2E3-213ENST00000602959 RAPGEF6Q8TEU7 1601 aa39.77■■■■□ 3.96
UBE2E3-213ENST00000602959 GLI2P10070 1586 aa39.76■■■■□ 3.96
UBE2E3-213ENST00000602959 WDR7Q9Y4E6 1490 aa39.7■■■■□ 3.95
UBE2E3-213ENST00000602959 EPRSP07814 1512 aaKnown RBP39.7■■■■□ 3.95
UBE2E3-213ENST00000602959 ARHGAP35Q9NRY4 1499 aa39.65■■■■□ 3.94
UBE2E3-213ENST00000602959 TSPOAP1O95153 1857 aa39.64■■■■□ 3.94
UBE2E3-213ENST00000602959 ATP10BO94823 1461 aa39.64■■■■□ 3.94
UBE2E3-213ENST00000602959 NUP153P49790 1475 aaKnown RBP39.61■■■■□ 3.93
UBE2E3-213ENST00000602959 MAP3K4Q9Y6R4 1608 aa39.58■■■■□ 3.93
UBE2E3-213ENST00000602959 PPRC1Q5VV67 1664 aaKnown RBP39.56■■■■□ 3.92
UBE2E3-213ENST00000602959 ARID3CA6NKF2 412 aa39.52■■■■□ 3.92
UBE2E3-213ENST00000602959 FMN1Q68DA7 1419 aa39.5■■■■□ 3.91
UBE2E3-213ENST00000602959 CFAP43Q8NDM7 1665 aa39.45■■■■□ 3.91
UBE2E3-213ENST00000602959 KDM6BO15054 1643 aa39.4■■■■□ 3.9
UBE2E3-213ENST00000602959 HECW1Q76N89 1606 aa39.39■■■■□ 3.9
UBE2E3-213ENST00000602959 KCNH8Q96L42 1107 aa39.38■■■■□ 3.89
UBE2E3-213ENST00000602959 TEX14Q8IWB6 1497 aa39.37■■■■□ 3.89
UBE2E3-213ENST00000602959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.34■■■■□ 3.89
UBE2E3-213ENST00000602959 HNRNPUL2Q1KMD3 747 aaKnown RBP39.34■■■■□ 3.89
UBE2E3-213ENST00000602959 CLIP1P30622 1438 aa39.32■■■■□ 3.89
UBE2E3-213ENST00000602959 ABCA9Q8IUA7 1624 aa39.32■■■■□ 3.88
UBE2E3-213ENST00000602959 CD109Q6YHK3 1445 aa39.31■■■■□ 3.88
UBE2E3-213ENST00000602959 MAGI3Q5TCQ9 1506 aa39.31■■■■□ 3.88
UBE2E3-213ENST00000602959 CDK13Q14004 1512 aaKnown RBP39.3■■■■□ 3.88
UBE2E3-213ENST00000602959 PCF11O94913 1555 aaKnown RBP39.21■■■■□ 3.87
UBE2E3-213ENST00000602959 PLEKHD1A6NEE1 506 aa39.21■■■■□ 3.87
UBE2E3-213ENST00000602959 LRRIQ1Q96JM4 1722 aa39.2■■■■□ 3.87
UBE2E3-213ENST00000602959 CASKIN1Q8WXD9 1431 aa39.18■■■■□ 3.86
UBE2E3-213ENST00000602959 ATP1B4Q9UN42 357 aaPredicted RBP39.15■■■■□ 3.86
UBE2E3-213ENST00000602959 COL17A1Q9UMD9 1497 aaPredicted RBP39.13■■■■□ 3.85
UBE2E3-213ENST00000602959 CEP162Q5TB80 1403 aa39.11■■■■□ 3.85
UBE2E3-213ENST00000602959 FYCO1Q9BQS8 1478 aa39.11■■■■□ 3.85
UBE2E3-213ENST00000602959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.08■■■■□ 3.85
UBE2E3-213ENST00000602959 CCDC18Q5T9S5 1454 aa39.07■■■■□ 3.85
UBE2E3-213ENST00000602959 TTC37Q6PGP7 1564 aa39.04■■■■□ 3.84
UBE2E3-213ENST00000602959 CDK11AQ9UQ88 783 aaPredicted RBP39.03■■■■□ 3.84
UBE2E3-213ENST00000602959 LOC105371045A0A1W2PR82 267 aa39■■■■□ 3.83
UBE2E3-213ENST00000602959 NEO1Q92859 1461 aa38.98■■■■□ 3.83
UBE2E3-213ENST00000602959 ARAP3Q8WWN8 1544 aa38.98■■■■□ 3.83
UBE2E3-213ENST00000602959 TROQ12816 1431 aaPredicted RBP38.97■■■■□ 3.83
UBE2E3-213ENST00000602959 PHLDB1Q86UU1 1377 aa38.97■■■■□ 3.83
UBE2E3-213ENST00000602959 KIF14Q15058 1648 aa38.94■■■■□ 3.82
UBE2E3-213ENST00000602959 CFAP74Q9C0B2 1584 aa38.9■■■■□ 3.82
UBE2E3-213ENST00000602959 MYO5CQ9NQX4 1742 aa38.86■■■■□ 3.81
UBE2E3-213ENST00000602959 FANCAO15360 1455 aa38.85■■■■□ 3.81
UBE2E3-213ENST00000602959 PLCH2O75038 1416 aa38.81■■■■□ 3.8
UBE2E3-213ENST00000602959 AKNAQ7Z591 1439 aa38.77■■■■□ 3.8
UBE2E3-213ENST00000602959 FRMPD1Q5SYB0 1578 aa38.74■■■■□ 3.79
UBE2E3-213ENST00000602959 RICTORQ6R327 1708 aa38.69■■■■□ 3.78
UBE2E3-213ENST00000602959 DENND4BO75064 1496 aaPredicted RBP38.67■■■■□ 3.78
UBE2E3-213ENST00000602959 VPS8Q8N3P4 1428 aa38.67■■■■□ 3.78
UBE2E3-213ENST00000602959 PREX2Q70Z35 1606 aa38.67■■■■□ 3.78
UBE2E3-213ENST00000602959 RAPGEF3O95398 923 aa38.66■■■■□ 3.78
UBE2E3-213ENST00000602959 CDC42BPBQ9Y5S2 1711 aa38.65■■■■□ 3.78
UBE2E3-213ENST00000602959 ADGRL1O94910 1474 aa38.63■■■■□ 3.77
UBE2E3-213ENST00000602959 ARHGAP5Q13017 1502 aa38.63■■■■□ 3.77
UBE2E3-213ENST00000602959 EFCAB2Q5VUJ9 269 aa38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms