RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	ABCC10	Q5T3U5	1492 aa		33.21	■■■□□ 2.91
LTBP4-231	ENST00000602251	SUPT5H	O00267	1087 aa	Known RBP	33.19	■■■□□ 2.9
LTBP4-231	ENST00000602251	NPM1	P06748	294 aa	Known RBP eCLIP	33.19	■■■□□ 2.9
LTBP4-231	ENST00000602251	MAPKBP1	O60336	1514 aa		33.11	■■■□□ 2.89
LTBP4-231	ENST00000602251	DIP2B	Q9P265	1576 aa		33.06	■■■□□ 2.88
LTBP4-231	ENST00000602251	KDM4F	A0A1W2PPD8	638 aa		33.06	■■■□□ 2.88
LTBP4-231	ENST00000602251	RUSC2	Q8N2Y8	1516 aa		33.06	■■■□□ 2.88
LTBP4-231	ENST00000602251	ADCY10	Q96PN6	1610 aa		33.02	■■■□□ 2.88
LTBP4-231	ENST00000602251	KDM6B	O15054	1643 aa		32.95	■■■□□ 2.87
LTBP4-231	ENST00000602251	KIAA0586	Q9BVV6	1533 aa		32.88	■■■□□ 2.85
LTBP4-231	ENST00000602251	TSPOAP1	O95153	1857 aa		32.85	■■■□□ 2.85
LTBP4-231	ENST00000602251	IGF1R	P08069	1367 aa		32.8	■■■□□ 2.84
LTBP4-231	ENST00000602251	ILDR1	Q86SU0	546 aa	Predicted RBP	32.78	■■■□□ 2.84
LTBP4-231	ENST00000602251	PTPRG	P23470	1445 aa		32.75	■■■□□ 2.83
LTBP4-231	ENST00000602251	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.67	■■■□□ 2.82
LTBP4-231	ENST00000602251	KIF27	Q86VH2	1401 aa		32.66	■■■□□ 2.82
LTBP4-231	ENST00000602251	CUL7	Q14999	1698 aa		32.64	■■■□□ 2.82
LTBP4-231	ENST00000602251	ABCC2	Q92887	1545 aa		32.63	■■■□□ 2.81
LTBP4-231	ENST00000602251	ASXL2	Q76L83	1435 aa		32.6	■■■□□ 2.81
LTBP4-231	ENST00000602251	TNIK	Q9UKE5	1360 aa		32.6	■■■□□ 2.81
LTBP4-231	ENST00000602251	PLB1	Q6P1J6	1458 aa		32.59	■■■□□ 2.81
LTBP4-231	ENST00000602251	CARMIL2	Q6F5E8	1435 aa		32.58	■■■□□ 2.81
LTBP4-231	ENST00000602251	GLI2	P10070	1586 aa		32.57	■■■□□ 2.8
LTBP4-231	ENST00000602251	PPRC1	Q5VV67	1664 aa	Known RBP	32.56	■■■□□ 2.8
LTBP4-231	ENST00000602251	ADGRL1	O94910	1474 aa		32.54	■■■□□ 2.8
LTBP4-231	ENST00000602251	CARMIL1	Q5VZK9	1371 aa		32.54	■■■□□ 2.8
LTBP4-231	ENST00000602251	UHRF1BP1L	A0JNW5	1464 aa		32.49	■■■□□ 2.79
LTBP4-231	ENST00000602251	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.48	■■■□□ 2.79
LTBP4-231	ENST00000602251	UACA	Q9BZF9	1416 aa		32.45	■■■□□ 2.79
LTBP4-231	ENST00000602251	IQGAP2	Q13576	1575 aa		32.42	■■■□□ 2.78
LTBP4-231	ENST00000602251	EPRS	P07814	1512 aa	Known RBP	32.4	■■■□□ 2.78
LTBP4-231	ENST00000602251	DISP1	Q96F81	1524 aa		32.37	■■■□□ 2.77
LTBP4-231	ENST00000602251	KDM5B	Q9UGL1	1544 aa		32.36	■■■□□ 2.77
LTBP4-231	ENST00000602251	MAP3K4	Q9Y6R4	1608 aa		32.34	■■■□□ 2.77
LTBP4-231	ENST00000602251	TEX14	Q8IWB6	1497 aa		32.32	■■■□□ 2.76
LTBP4-231	ENST00000602251	HECW2	Q9P2P5	1572 aa		32.32	■■■□□ 2.76
LTBP4-231	ENST00000602251	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.24	■■■□□ 2.75
LTBP4-231	ENST00000602251	UGGT2	Q9NYU1	1516 aa		32.21	■■■□□ 2.75
LTBP4-231	ENST00000602251	WDR7	Q9Y4E6	1490 aa		32.15	■■■□□ 2.74
LTBP4-231	ENST00000602251	KIAA0556	O60303	1618 aa		32.12	■■■□□ 2.73
LTBP4-231	ENST00000602251	RAPGEF2	Q9Y4G8	1499 aa		32.12	■■■□□ 2.73
LTBP4-231	ENST00000602251	CD109	Q6YHK3	1445 aa		32.07	■■■□□ 2.72
LTBP4-231	ENST00000602251	MAGI3	Q5TCQ9	1506 aa		32.05	■■■□□ 2.72
LTBP4-231	ENST00000602251	KCNH8	Q96L42	1107 aa		32.04	■■■□□ 2.72
LTBP4-231	ENST00000602251	CFAP43	Q8NDM7	1665 aa		31.98	■■■□□ 2.71
LTBP4-231	ENST00000602251	ABCA8	O94911	1581 aa		31.91	■■■□□ 2.7
LTBP4-231	ENST00000602251	FBXO41	Q8TF61	875 aa		31.9	■■■□□ 2.7
LTBP4-231	ENST00000602251	GOLGA3	Q08378	1498 aa		31.88	■■■□□ 2.69
LTBP4-231	ENST00000602251	KIF21B	O75037	1637 aa		31.87	■■■□□ 2.69
LTBP4-231	ENST00000602251	ARAP3	Q8WWN8	1544 aa		31.83	■■■□□ 2.69
LTBP4-231	ENST00000602251	CTTNBP2	Q8WZ74	1663 aa		31.81	■■■□□ 2.68
LTBP4-231	ENST00000602251	PTPRM	P28827	1452 aa		31.73	■■■□□ 2.67
LTBP4-231	ENST00000602251	ARID3C	A6NKF2	412 aa		31.71	■■■□□ 2.67
LTBP4-231	ENST00000602251	PHLDB1	Q86UU1	1377 aa		31.7	■■■□□ 2.67
LTBP4-231	ENST00000602251	ATP10B	O94823	1461 aa		31.69	■■■□□ 2.66
LTBP4-231	ENST00000602251	ADAMTSL3	P82987	1691 aa		31.69	■■■□□ 2.66
LTBP4-231	ENST00000602251	RAPGEF3	O95398	923 aa		31.67	■■■□□ 2.66
LTBP4-231	ENST00000602251	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.65	■■■□□ 2.66
LTBP4-231	ENST00000602251	PRX	Q9BXM0	1461 aa		31.63	■■■□□ 2.65
LTBP4-231	ENST00000602251	P3H3	Q8IVL6	736 aa		31.62	■■■□□ 2.65
LTBP4-231	ENST00000602251	ABCA9	Q8IUA7	1624 aa		31.61	■■■□□ 2.65
LTBP4-231	ENST00000602251	NEO1	Q92859	1461 aa		31.56	■■■□□ 2.64
LTBP4-231	ENST00000602251	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.54	■■■□□ 2.64
LTBP4-231	ENST00000602251	BCORL1	Q5H9F3	1711 aa		31.53	■■■□□ 2.64
LTBP4-231	ENST00000602251	PCF11	O94913	1555 aa	Known RBP	31.53	■■■□□ 2.64
LTBP4-231	ENST00000602251	LMTK3	Q96Q04	1460 aa		31.51	■■■□□ 2.63
LTBP4-231	ENST00000602251	MADD	Q8WXG6	1647 aa		31.49	■■■□□ 2.63
LTBP4-231	ENST00000602251	FRMPD1	Q5SYB0	1578 aa		31.47	■■■□□ 2.63
LTBP4-231	ENST00000602251	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.45	■■■□□ 2.63
LTBP4-231	ENST00000602251	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.45	■■■□□ 2.63
LTBP4-231	ENST00000602251	RAPGEF6	Q8TEU7	1601 aa		31.39	■■■□□ 2.62
LTBP4-231	ENST00000602251	HSPA2	P54652	639 aa		31.37	■■■□□ 2.61
LTBP4-231	ENST00000602251	SAMD9	Q5K651	1589 aa		31.37	■■■□□ 2.61
LTBP4-231	ENST00000602251	RIMS1	Q86UR5	1692 aa	Known RBP	31.35	■■■□□ 2.61
LTBP4-231	ENST00000602251	ARHGEF40	Q8TER5	1519 aa		31.34	■■■□□ 2.61
LTBP4-231	ENST00000602251	DENND4B	O75064	1496 aa	Predicted RBP	31.33	■■■□□ 2.61
LTBP4-231	ENST00000602251	NUP153	P49790	1475 aa	Known RBP	31.33	■■■□□ 2.61
LTBP4-231	ENST00000602251	FHOD3	Q2V2M9	1422 aa		31.3	■■■□□ 2.6
LTBP4-231	ENST00000602251	AKNA	Q7Z591	1439 aa		31.3	■■■□□ 2.6
LTBP4-231	ENST00000602251	RICTOR	Q6R327	1708 aa		31.29	■■■□□ 2.6
LTBP4-231	ENST00000602251	PLEKHD1	A6NEE1	506 aa		31.28	■■■□□ 2.6
LTBP4-231	ENST00000602251	PLPPR3	Q6T4P5	718 aa		31.28	■■■□□ 2.6
LTBP4-231	ENST00000602251	CERK	Q8TCT0	537 aa		31.25	■■■□□ 2.59
LTBP4-231	ENST00000602251	CSRNP3	Q8WYN3	585 aa		31.25	■■■□□ 2.59
LTBP4-231	ENST00000602251	POGZ	Q7Z3K3	1410 aa		31.24	■■■□□ 2.59
LTBP4-231	ENST00000602251	FANCA	O15360	1455 aa		31.24	■■■□□ 2.59
LTBP4-231	ENST00000602251	YEATS2	Q9ULM3	1422 aa		31.19	■■■□□ 2.58
LTBP4-231	ENST00000602251	RANGAP1	P46060	587 aa	Predicted RBP	31.18	■■■□□ 2.58
LTBP4-231	ENST00000602251	ZMYM4	Q5VZL5	1548 aa		31.18	■■■□□ 2.58
LTBP4-231	ENST00000602251	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.17	■■■□□ 2.58
LTBP4-231	ENST00000602251	CFAP74	Q9C0B2	1584 aa		31.17	■■■□□ 2.58
LTBP4-231	ENST00000602251	SIGLEC1	Q9BZZ2	1709 aa		31.16	■■■□□ 2.58
LTBP4-231	ENST00000602251	MLEC	Q14165	292 aa		31.16	■■■□□ 2.58
LTBP4-231	ENST00000602251	ZFYVE16	Q7Z3T8	1539 aa		31.15	■■■□□ 2.58
LTBP4-231	ENST00000602251	MAGI2	Q86UL8	1455 aa		31.14	■■■□□ 2.57
LTBP4-231	ENST00000602251	EFCAB5	A4FU69	1503 aa		31.13	■■■□□ 2.57
LTBP4-231	ENST00000602251	TTC37	Q6PGP7	1564 aa		31.09	■■■□□ 2.57
LTBP4-231	ENST00000602251	HECW1	Q76N89	1606 aa		31.06	■■■□□ 2.56
LTBP4-231	ENST00000602251	SCAPER	Q9BY12	1400 aa		31.04	■■■□□ 2.56
LTBP4-231	ENST00000602251	FER1L4	A9Z1Z3	1794 aa		31.04	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 871.9 ms