RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-231ENST00000602251 NISCHQ9Y2I1 1504 aa47■■■■■ 5.11
LTBP4-231ENST00000602251 ABCC9O60706 1549 aa43.15■■■■■ 4.5
LTBP4-231ENST00000602251 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.38
LTBP4-231ENST00000602251 DNAJC5BQ9UF47 199 aa41.2■■■■■ 4.19
LTBP4-231ENST00000602251 RB1CC1Q8TDY2 1594 aa40.72■■■■■ 4.11
LTBP4-231ENST00000602251 NACADO15069 1562 aa40.29■■■■■ 4.04
LTBP4-231ENST00000602251 PABPN1Q86U42 306 aaKnown RBP eCLIP40.13■■■■■ 4.01
LTBP4-231ENST00000602251 DCAF8L2P0C7V8 631 aa40.04■■■■■ 4
LTBP4-231ENST00000602251 UNC13AQ9UPW8 1703 aa39.76■■■■□ 3.96
LTBP4-231ENST00000602251 BICRAQ9NZM4 1560 aa39.6■■■■□ 3.93
LTBP4-231ENST00000602251 MYO15BQ96JP2 1530 aa39.52■■■■□ 3.92
LTBP4-231ENST00000602251 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
LTBP4-231ENST00000602251 CECR2Q9BXF3 1484 aa38.94■■■■□ 3.82
LTBP4-231ENST00000602251 CC2D2AQ9P2K1 1620 aa38.91■■■■□ 3.82
LTBP4-231ENST00000602251 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
LTBP4-231ENST00000602251 DCAF1Q9Y4B6 1507 aa38.76■■■■□ 3.8
LTBP4-231ENST00000602251 EIF4G1Q04637 1599 aaKnown RBP38.66■■■■□ 3.78
LTBP4-231ENST00000602251 SCRIBQ14160 1630 aa38.6■■■■□ 3.77
LTBP4-231ENST00000602251 DNAJC5Q9H3Z4 198 aa38.32■■■■□ 3.72
LTBP4-231ENST00000602251 CUX2O14529 1486 aa37.45■■■■□ 3.59
LTBP4-231ENST00000602251 ERCC6Q03468 1493 aa37.28■■■■□ 3.56
LTBP4-231ENST00000602251 NCAPD3P42695 1498 aa37.26■■■■□ 3.55
LTBP4-231ENST00000602251 ATAD2BQ9ULI0 1458 aa37.03■■■■□ 3.52
LTBP4-231ENST00000602251 NESP48681 1621 aa36.88■■■■□ 3.49
LTBP4-231ENST00000602251 SMARCA2P51531 1590 aa36.85■■■■□ 3.49
LTBP4-231ENST00000602251 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
LTBP4-231ENST00000602251 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
LTBP4-231ENST00000602251 BAZ1BQ9UIG0 1483 aaKnown RBP36.6■■■■□ 3.45
LTBP4-231ENST00000602251 THOC2Q8NI27 1593 aaKnown RBP36.57■■■■□ 3.45
LTBP4-231ENST00000602251 BAZ1AQ9NRL2 1556 aaPredicted RBP36.49■■■■□ 3.43
LTBP4-231ENST00000602251 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
LTBP4-231ENST00000602251 PEG3Q9GZU2 1588 aa36.43■■■■□ 3.42
LTBP4-231ENST00000602251 PDS5BQ9NTI5 1447 aa36.33■■■■□ 3.41
LTBP4-231ENST00000602251 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
LTBP4-231ENST00000602251 KIF21AQ7Z4S6 1674 aa36.3■■■■□ 3.4
LTBP4-231ENST00000602251 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
LTBP4-231ENST00000602251 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
LTBP4-231ENST00000602251 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
LTBP4-231ENST00000602251 WDR62O43379 1518 aa35.94■■■■□ 3.34
LTBP4-231ENST00000602251 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
LTBP4-231ENST00000602251 WIZO95785 1651 aa35.72■■■■□ 3.31
LTBP4-231ENST00000602251 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
LTBP4-231ENST00000602251 FANCD2Q9BXW9 1451 aa35.66■■■■□ 3.3
LTBP4-231ENST00000602251 CFTRP13569 1480 aa35.53■■■■□ 3.28
LTBP4-231ENST00000602251 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
LTBP4-231ENST00000602251 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
LTBP4-231ENST00000602251 RIMBP3CA6NJZ7 1639 aa35.22■■■■□ 3.23
LTBP4-231ENST00000602251 RIMBP3BA6NNM3 1639 aa35.22■■■■□ 3.23
LTBP4-231ENST00000602251 RIMBP3Q9UFD9 1639 aa35.22■■■■□ 3.23
LTBP4-231ENST00000602251 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
LTBP4-231ENST00000602251 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
LTBP4-231ENST00000602251 ARHGEF11O15085 1522 aa35.06■■■■□ 3.2
LTBP4-231ENST00000602251 IFT140Q96RY7 1462 aa35.06■■■■□ 3.2
LTBP4-231ENST00000602251 PRDM2Q13029 1718 aa34.97■■■■□ 3.19
LTBP4-231ENST00000602251 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
LTBP4-231ENST00000602251 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
LTBP4-231ENST00000602251 CCDC88BA6NC98 1476 aa34.87■■■■□ 3.17
LTBP4-231ENST00000602251 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
LTBP4-231ENST00000602251 ABCC8Q09428 1581 aa34.78■■■■□ 3.16
LTBP4-231ENST00000602251 TRHP20396 242 aaPredicted RBP34.74■■■■□ 3.15
LTBP4-231ENST00000602251 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.151e-9■■□□□ 14.4
LTBP4-231ENST00000602251 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
LTBP4-231ENST00000602251 ARAP1Q96P48 1450 aa34.68■■■■□ 3.14
LTBP4-231ENST00000602251 CHD1O14646 1710 aa34.66■■■■□ 3.14
LTBP4-231ENST00000602251 FBLN2P98095 1184 aa34.64■■■■□ 3.14
LTBP4-231ENST00000602251 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
LTBP4-231ENST00000602251 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
LTBP4-231ENST00000602251 RAD54L2Q9Y4B4 1467 aa34.41■■■■□ 3.1
LTBP4-231ENST00000602251 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
LTBP4-231ENST00000602251 SOGA1O94964 1423 aa34.37■■■■□ 3.09
LTBP4-231ENST00000602251 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
LTBP4-231ENST00000602251 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
LTBP4-231ENST00000602251 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
LTBP4-231ENST00000602251 AEBP2Q6ZN18 517 aaPredicted RBP34.22■■■■□ 3.07
LTBP4-231ENST00000602251 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
LTBP4-231ENST00000602251 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
LTBP4-231ENST00000602251 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
LTBP4-231ENST00000602251 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
LTBP4-231ENST00000602251 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
LTBP4-231ENST00000602251 SYNJ2O15056 1496 aa34.08■■■■□ 3.05
LTBP4-231ENST00000602251 CUX1P39880 1505 aa34.04■■■■□ 3.04
LTBP4-231ENST00000602251 GAPVD1Q14C86 1478 aa34.01■■■■□ 3.03
LTBP4-231ENST00000602251 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
LTBP4-231ENST00000602251 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
LTBP4-231ENST00000602251 ERCC6L2Q5T890 1561 aa33.73■■■□□ 2.99
LTBP4-231ENST00000602251 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
LTBP4-231ENST00000602251 GRIN2AQ12879 1464 aa33.67■■■□□ 2.98
LTBP4-231ENST00000602251 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
LTBP4-231ENST00000602251 NUP160Q12769 1436 aa33.6■■■□□ 2.97
LTBP4-231ENST00000602251 ADAMTS12P58397 1594 aa33.52■■■□□ 2.96
LTBP4-231ENST00000602251 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
LTBP4-231ENST00000602251 SHROOM2Q13796 1616 aa33.49■■■□□ 2.95
LTBP4-231ENST00000602251 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
LTBP4-231ENST00000602251 KIF13AQ9H1H9 1805 aa33.4■■■□□ 2.94
LTBP4-231ENST00000602251 PRG4Q92954 1404 aaPredicted RBP33.35■■■□□ 2.93
LTBP4-231ENST00000602251 JPH4Q96JJ6 628 aa33.31■■■□□ 2.92
LTBP4-231ENST00000602251 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
LTBP4-231ENST00000602251 TOP2BQ02880 1626 aa33.29■■■□□ 2.92
LTBP4-231ENST00000602251 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
LTBP4-231ENST00000602251 FAM69CQ0P6D2 419 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms